RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 CDK13Q14004 1512 aaKnown RBP8.21□□□□□ -1.1
PUM1-220ENST00000529846 EHBP1L1Q8N3D4 1523 aa8.21□□□□□ -1.1
PUM1-220ENST00000529846 KIF14Q15058 1648 aa8.21□□□□□ -1.1
PUM1-220ENST00000529846 CCNB3Q8WWL7 1395 aa8.21□□□□□ -1.1
PUM1-220ENST00000529846 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
PUM1-220ENST00000529846 TIAM1Q13009 1591 aa8.2□□□□□ -1.1
PUM1-220ENST00000529846 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
PUM1-220ENST00000529846 MAP3K4Q9Y6R4 1608 aa8.19□□□□□ -1.1
PUM1-220ENST00000529846 CFDP1Q9UEE9 299 aaPredicted RBP8.19□□□□□ -1.1
PUM1-220ENST00000529846 MIA2Q96PC5 1412 aa8.18□□□□□ -1.1
PUM1-220ENST00000529846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.18□□□□□ -1.1
PUM1-220ENST00000529846 CFAP74Q9C0B2 1584 aa8.18□□□□□ -1.1
PUM1-220ENST00000529846 KIAA1107Q9UPP5 1409 aa8.17□□□□□ -1.1
PUM1-220ENST00000529846 FANCAO15360 1455 aa8.16□□□□□ -1.1
PUM1-220ENST00000529846 KIF13AQ9H1H9 1805 aa8.16□□□□□ -1.1
PUM1-220ENST00000529846 SUPT6HQ7KZ85 1726 aaKnown RBP8.15□□□□□ -1.1
PUM1-220ENST00000529846 LRRIQ1Q96JM4 1722 aa8.15□□□□□ -1.1
PUM1-220ENST00000529846 GPATCH8Q9UKJ3 1502 aaKnown RBP8.15□□□□□ -1.1
PUM1-220ENST00000529846 AKNAQ7Z591 1439 aa8.15□□□□□ -1.1
PUM1-220ENST00000529846 ZBTB22O15209 634 aa8.15□□□□□ -1.1
PUM1-220ENST00000529846 NCOA2Q15596 1464 aa8.14□□□□□ -1.11
PUM1-220ENST00000529846 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
PUM1-220ENST00000529846 ARHGAP5Q13017 1502 aa8.13□□□□□ -1.11
PUM1-220ENST00000529846 MAGI2Q86UL8 1455 aa8.13□□□□□ -1.11
PUM1-220ENST00000529846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.13□□□□□ -1.113e-10■■■□□ 17.6
PUM1-220ENST00000529846 HOXD11P31277 338 aaPredicted RBP8.13□□□□□ -1.11
PUM1-220ENST00000529846 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
PUM1-220ENST00000529846 DENND4BO75064 1496 aaPredicted RBP8.13□□□□□ -1.11
PUM1-220ENST00000529846 MYOM3Q5VTT5 1437 aa8.12□□□□□ -1.11
PUM1-220ENST00000529846 TSPY4P0CV99 314 aa8.12□□□□□ -1.11
PUM1-220ENST00000529846 TSPY10P0CW01 314 aa8.12□□□□□ -1.11
PUM1-220ENST00000529846 ADGRL1O94910 1474 aa8.12□□□□□ -1.11
PUM1-220ENST00000529846 MYO5CQ9NQX4 1742 aa8.12□□□□□ -1.11
PUM1-220ENST00000529846 ITSN2Q9NZM3 1697 aa8.11□□□□□ -1.11
PUM1-220ENST00000529846 ACIN1Q9UKV3 1341 aaKnown RBP8.11□□□□□ -1.11
PUM1-220ENST00000529846 TTC37Q6PGP7 1564 aa8.11□□□□□ -1.11
PUM1-220ENST00000529846 ZNF518AQ6AHZ1 1483 aa8.11□□□□□ -1.11
PUM1-220ENST00000529846 SCAPERQ9BY12 1400 aa8.11□□□□□ -1.11
PUM1-220ENST00000529846 PREX2Q70Z35 1606 aa8.11□□□□□ -1.11
PUM1-220ENST00000529846 ZNF777Q9ULD5 760 aaPredicted RBP8.1□□□□□ -1.11
PUM1-220ENST00000529846 KDM6BO15054 1643 aa8.09□□□□□ -1.11
PUM1-220ENST00000529846 RTEL1-TNFRSF6BF6WH68 1400 aa8.09□□□□□ -1.11
PUM1-220ENST00000529846 MLH3Q9UHC1 1453 aa8.08□□□□□ -1.12
PUM1-220ENST00000529846 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
PUM1-220ENST00000529846 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
PUM1-220ENST00000529846 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
PUM1-220ENST00000529846 SPAG9O60271 1321 aaKnown RBP8.07□□□□□ -1.12
PUM1-220ENST00000529846 TCOF1Q13428 1488 aaKnown RBP8.06□□□□□ -1.12
PUM1-220ENST00000529846 RAPGEF3O95398 923 aa8.06□□□□□ -1.12
PUM1-220ENST00000529846 HNRNPMP52272 730 aaKnown RBP eCLIP8.06□□□□□ -1.12
PUM1-220ENST00000529846 AFAP1Q8N556 730 aa8.06□□□□□ -1.12
PUM1-220ENST00000529846 ABCC1P33527 1531 aa8.06□□□□□ -1.12
PUM1-220ENST00000529846 TSPOAP1O95153 1857 aa8.06□□□□□ -1.12
PUM1-220ENST00000529846 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
PUM1-220ENST00000529846 ZMYM4Q5VZL5 1548 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 MYT1LQ9UL68 1186 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 CAMSAP2Q08AD1 1489 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 CCDC141Q6ZP82 1450 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 MBD5Q9P267 1494 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 ARHGEF5Q12774 1597 aa8.05□□□□□ -1.12
PUM1-220ENST00000529846 RRBP1Q9P2E9 1410 aaKnown RBP8.04□□□□□ -1.12
PUM1-220ENST00000529846 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
PUM1-220ENST00000529846 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
PUM1-220ENST00000529846 KDM5CP41229 1560 aa8.03□□□□□ -1.12
PUM1-220ENST00000529846 ATP10AO60312 1499 aa8.03□□□□□ -1.12
PUM1-220ENST00000529846 SHANK2Q9UPX8 1470 aa8.03□□□□□ -1.12
PUM1-220ENST00000529846 ANKRD30AQ9BXX3 1397 aa8.03□□□□□ -1.12
PUM1-220ENST00000529846 FAM50AQ14320 339 aaKnown RBP8.03□□□□□ -1.12
PUM1-220ENST00000529846 FOXD4L1Q9NU39 408 aa8.03□□□□□ -1.12
PUM1-220ENST00000529846 ZNF644Q9H582 1327 aaPredicted RBP8.03□□□□□ -1.12
PUM1-220ENST00000529846 SAMD9LQ8IVG5 1584 aa8.02□□□□□ -1.13
PUM1-220ENST00000529846 ROCK1Q13464 1354 aa8.02□□□□□ -1.13
PUM1-220ENST00000529846 ZFYVE16Q7Z3T8 1539 aa8.02□□□□□ -1.13
PUM1-220ENST00000529846 TRAPPC8Q9Y2L5 1435 aa8.02□□□□□ -1.13
PUM1-220ENST00000529846 PTPN23Q9H3S7 1636 aa8.01□□□□□ -1.13
PUM1-220ENST00000529846 SYCP2Q9BX26 1530 aa8.01□□□□□ -1.13
PUM1-220ENST00000529846 ARHGEF12Q9NZN5 1544 aa8.01□□□□□ -1.13
PUM1-220ENST00000529846 C9orf84Q5VXU9 1444 aa8.01□□□□□ -1.13
PUM1-220ENST00000529846 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
PUM1-220ENST00000529846 DHX29Q7Z478 1369 aaKnown RBP8□□□□□ -1.13
PUM1-220ENST00000529846 ABCC5O15440 1437 aa8□□□□□ -1.13
PUM1-220ENST00000529846 DAPK1P53355 1430 aa8□□□□□ -1.13
PUM1-220ENST00000529846 MAST1Q9Y2H9 1570 aa8□□□□□ -1.13
PUM1-220ENST00000529846 RICTORQ6R327 1708 aa8□□□□□ -1.13
PUM1-220ENST00000529846 AGLP35573 1532 aa7.99□□□□□ -1.13
PUM1-220ENST00000529846 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
PUM1-220ENST00000529846 HECW2Q9P2P5 1572 aa7.99□□□□□ -1.13
PUM1-220ENST00000529846 ARID4BQ4LE39 1312 aaPredicted RBP7.99□□□□□ -1.13
PUM1-220ENST00000529846 ATP7AQ04656 1500 aa7.98□□□□□ -1.13
PUM1-220ENST00000529846 FRMPD1Q5SYB0 1578 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 NCOA1Q15788 1441 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 DNMT1P26358 1616 aaKnown RBP7.97□□□□□ -1.13
PUM1-220ENST00000529846 HRCP23327 699 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 PPARGC1BQ86YN6 1023 aaKnown RBP7.97□□□□□ -1.13
PUM1-220ENST00000529846 ADGRL2O95490 1459 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 A2MP01023 1474 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 ARHGEF40Q8TER5 1519 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 DUOX2Q9NRD8 1548 aa7.97□□□□□ -1.13
PUM1-220ENST00000529846 FAM135AQ9P2D6 1515 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms