RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 TROQ12816 1431 aaPredicted RBP23.39■■□□□ 1.33
FDFT1-215ENST00000529464 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
FDFT1-215ENST00000529464 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
FDFT1-215ENST00000529464 LRRIQ1Q96JM4 1722 aa23.34■■□□□ 1.33
FDFT1-215ENST00000529464 MLECQ14165 292 aa23.34■■□□□ 1.33
FDFT1-215ENST00000529464 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
FDFT1-215ENST00000529464 MAGI2Q86UL8 1455 aa23.34■■□□□ 1.33
FDFT1-215ENST00000529464 PCF11O94913 1555 aaKnown RBP23.33■■□□□ 1.33
FDFT1-215ENST00000529464 CLIP1P30622 1438 aa23.33■■□□□ 1.32
FDFT1-215ENST00000529464 RIMS1Q86UR5 1692 aaKnown RBP23.32■■□□□ 1.32
FDFT1-215ENST00000529464 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
FDFT1-215ENST00000529464 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
FDFT1-215ENST00000529464 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
FDFT1-215ENST00000529464 LMTK3Q96Q04 1460 aa23.28■■□□□ 1.32
FDFT1-215ENST00000529464 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
FDFT1-215ENST00000529464 ATP10AO60312 1499 aa23.26■■□□□ 1.31
FDFT1-215ENST00000529464 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
FDFT1-215ENST00000529464 C9orf84Q5VXU9 1444 aa23.24■■□□□ 1.31
FDFT1-215ENST00000529464 ZNF518AQ6AHZ1 1483 aa23.23■■□□□ 1.31
FDFT1-215ENST00000529464 HSPA2P54652 639 aa23.21■■□□□ 1.31
FDFT1-215ENST00000529464 MYT1LQ9UL68 1186 aa23.2■■□□□ 1.3
FDFT1-215ENST00000529464 KDM5CP41229 1560 aa23.19■■□□□ 1.3
FDFT1-215ENST00000529464 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
FDFT1-215ENST00000529464 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
FDFT1-215ENST00000529464 TRAPPC8Q9Y2L5 1435 aa23.18■■□□□ 1.3
FDFT1-215ENST00000529464 CDC42BPBQ9Y5S2 1711 aa23.17■■□□□ 1.3
FDFT1-215ENST00000529464 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
FDFT1-215ENST00000529464 ABCC1P33527 1531 aa23.15■■□□□ 1.3
FDFT1-215ENST00000529464 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.3
FDFT1-215ENST00000529464 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.3
FDFT1-215ENST00000529464 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.29
FDFT1-215ENST00000529464 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
FDFT1-215ENST00000529464 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
FDFT1-215ENST00000529464 ABCA6Q8N139 1617 aa23.11■■□□□ 1.29
FDFT1-215ENST00000529464 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.29
FDFT1-215ENST00000529464 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.28
FDFT1-215ENST00000529464 CDC42BPAQ5VT25 1732 aa23.07■■□□□ 1.28
FDFT1-215ENST00000529464 REREQ9P2R6 1566 aa23.05■■□□□ 1.28
FDFT1-215ENST00000529464 FBXO41Q8TF61 875 aa23.04■■□□□ 1.28
FDFT1-215ENST00000529464 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
FDFT1-215ENST00000529464 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
FDFT1-215ENST00000529464 HNRNPMP52272 730 aaKnown RBP eCLIP23.02■■□□□ 1.287e-7■■■■□ 21.2
FDFT1-215ENST00000529464 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
FDFT1-215ENST00000529464 AGLP35573 1532 aa23■■□□□ 1.27
FDFT1-215ENST00000529464 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
FDFT1-215ENST00000529464 CFDP1Q9UEE9 299 aaPredicted RBP22.99■■□□□ 1.27
FDFT1-215ENST00000529464 CCNB3Q8WWL7 1395 aa22.99■■□□□ 1.27
FDFT1-215ENST00000529464 CEP162Q5TB80 1403 aa22.98■■□□□ 1.27
FDFT1-215ENST00000529464 SPAG9O60271 1321 aaKnown RBP22.97■■□□□ 1.27
FDFT1-215ENST00000529464 PREX1Q8TCU6 1659 aa22.95■■□□□ 1.26
FDFT1-215ENST00000529464 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
FDFT1-215ENST00000529464 UHRF1BP1Q6BDS2 1440 aa22.93■■□□□ 1.26
FDFT1-215ENST00000529464 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
FDFT1-215ENST00000529464 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
FDFT1-215ENST00000529464 PLEKHH2Q8IVE3 1493 aa22.91■■□□□ 1.26
FDFT1-215ENST00000529464 ATP7AQ04656 1500 aa22.9■■□□□ 1.26
FDFT1-215ENST00000529464 C3P01024 1663 aa22.9■■□□□ 1.26
FDFT1-215ENST00000529464 TIAM1Q13009 1591 aa22.89■■□□□ 1.26
FDFT1-215ENST00000529464 EHBP1L1Q8N3D4 1523 aa22.89■■□□□ 1.26
FDFT1-215ENST00000529464 INO80Q9ULG1 1556 aaPredicted RBP22.87■■□□□ 1.25
FDFT1-215ENST00000529464 CNTLNQ9NXG0 1405 aa22.86■■□□□ 1.25
FDFT1-215ENST00000529464 CERKQ8TCT0 537 aa22.86■■□□□ 1.25
FDFT1-215ENST00000529464 A2MP01023 1474 aa22.85■■□□□ 1.25
FDFT1-215ENST00000529464 SUPT6HQ7KZ85 1726 aaKnown RBP22.83■■□□□ 1.25
FDFT1-215ENST00000529464 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
FDFT1-215ENST00000529464 MBD5Q9P267 1494 aa22.83■■□□□ 1.25
FDFT1-215ENST00000529464 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
FDFT1-215ENST00000529464 STRCQ7RTU9 1775 aa22.81■■□□□ 1.24
FDFT1-215ENST00000529464 ZMYM3Q14202 1370 aa22.8■■□□□ 1.24
FDFT1-215ENST00000529464 GGT6Q6P531 493 aa22.8■■□□□ 1.24
FDFT1-215ENST00000529464 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
FDFT1-215ENST00000529464 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
FDFT1-215ENST00000529464 NPATQ14207 1427 aa22.75■■□□□ 1.23
FDFT1-215ENST00000529464 SETD1BQ9UPS6 1966 aaKnown RBP22.74■■□□□ 1.23
FDFT1-215ENST00000529464 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
FDFT1-215ENST00000529464 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
FDFT1-215ENST00000529464 CAMSAP2Q08AD1 1489 aa22.73■■□□□ 1.23
FDFT1-215ENST00000529464 NCOA1Q15788 1441 aa22.73■■□□□ 1.23
FDFT1-215ENST00000529464 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
FDFT1-215ENST00000529464 PTPRTO14522 1441 aa22.72■■□□□ 1.23
FDFT1-215ENST00000529464 PTPRKQ15262 1439 aa22.71■■□□□ 1.23
FDFT1-215ENST00000529464 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
FDFT1-215ENST00000529464 DHX29Q7Z478 1369 aaKnown RBP22.7■■□□□ 1.22
FDFT1-215ENST00000529464 CCDC141Q6ZP82 1450 aa22.7■■□□□ 1.22
FDFT1-215ENST00000529464 ADGBQ8N7X0 1667 aa22.7■■□□□ 1.22
FDFT1-215ENST00000529464 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
FDFT1-215ENST00000529464 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
FDFT1-215ENST00000529464 NCKAP5LQ9HCH0 1330 aa22.66■■□□□ 1.22
FDFT1-215ENST00000529464 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
FDFT1-215ENST00000529464 KIF3BO15066 747 aa22.65■■□□□ 1.22
FDFT1-215ENST00000529464 MYO3AQ8NEV4 1616 aa22.64■■□□□ 1.22
FDFT1-215ENST00000529464 PPP6R1Q9UPN7 881 aa22.64■■□□□ 1.21
FDFT1-215ENST00000529464 LTBP4Q8N2S1 1624 aa22.61■■□□□ 1.21
FDFT1-215ENST00000529464 CEP170BQ9Y4F5 1589 aaPredicted RBP22.61■■□□□ 1.21
FDFT1-215ENST00000529464 RSPH4AQ5TD94 716 aa22.6■■□□□ 1.21
FDFT1-215ENST00000529464 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
FDFT1-215ENST00000529464 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
FDFT1-215ENST00000529464 ZNF142P52746 1687 aaPredicted RBP22.58■■□□□ 1.2
FDFT1-215ENST00000529464 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
FDFT1-215ENST00000529464 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms