RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 PDE4AP27815 886 aa11.99□□□□□ -0.49
NUP98-216ENST00000529379 MAMSTRQ6ZN01 415 aa11.99□□□□□ -0.49
NUP98-216ENST00000529379 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
NUP98-216ENST00000529379 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
NUP98-216ENST00000529379 G3V3G9 751 aa11.97□□□□□ -0.49
NUP98-216ENST00000529379 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
NUP98-216ENST00000529379 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
NUP98-216ENST00000529379 MFSD10Q14728 455 aa11.95□□□□□ -0.5
NUP98-216ENST00000529379 DDX27Q96GQ7 796 aaKnown RBP11.92□□□□□ -0.5
NUP98-216ENST00000529379 BCANQ96GW7 911 aa11.92□□□□□ -0.5
NUP98-216ENST00000529379 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
NUP98-216ENST00000529379 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
NUP98-216ENST00000529379 TMEM92Q6UXU6 159 aa11.9□□□□□ -0.5
NUP98-216ENST00000529379 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
NUP98-216ENST00000529379 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
NUP98-216ENST00000529379 KIF3CO14782 793 aa11.88□□□□□ -0.51
NUP98-216ENST00000529379 E2F4Q16254 413 aa11.88□□□□□ -0.51
NUP98-216ENST00000529379 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
NUP98-216ENST00000529379 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
NUP98-216ENST00000529379 PPP1R15BQ5SWA1 713 aa11.87□□□□□ -0.51
NUP98-216ENST00000529379 DSG2Q14126 1118 aa11.86□□□□□ -0.51
NUP98-216ENST00000529379 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
NUP98-216ENST00000529379 FOXK1P85037 733 aa11.84□□□□□ -0.51
NUP98-216ENST00000529379 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
NUP98-216ENST00000529379 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
NUP98-216ENST00000529379 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
NUP98-216ENST00000529379 NBR1Q14596 966 aa11.81□□□□□ -0.52
NUP98-216ENST00000529379 PLPP6Q8IY26 295 aa11.8□□□□□ -0.52
NUP98-216ENST00000529379 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
NUP98-216ENST00000529379 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
NUP98-216ENST00000529379 ARIH1Q9Y4X5 557 aaPredicted RBP11.74□□□□□ -0.53
NUP98-216ENST00000529379 FAM163AQ96GL9 167 aaPredicted RBP11.71□□□□□ -0.53
NUP98-216ENST00000529379 HOXB3P14651 431 aaPredicted RBP11.7□□□□□ -0.54
NUP98-216ENST00000529379 DPYSL4O14531 572 aa11.68□□□□□ -0.54
NUP98-216ENST00000529379 ST18O60284 1047 aa11.67□□□□□ -0.54
NUP98-216ENST00000529379 SEMA3EO15041 775 aa11.66□□□□□ -0.54
NUP98-216ENST00000529379 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
NUP98-216ENST00000529379 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
NUP98-216ENST00000529379 TESPA1A2RU30 521 aaPredicted RBP11.61□□□□□ -0.55
NUP98-216ENST00000529379 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
NUP98-216ENST00000529379 PDIA6Q15084 440 aa11.61□□□□□ -0.55
NUP98-216ENST00000529379 SLC34A2O95436 690 aa11.6□□□□□ -0.55
NUP98-216ENST00000529379 PTCD2Q8WV60 388 aaKnown RBP11.6□□□□□ -0.55
NUP98-216ENST00000529379 SNPHO15079 494 aa11.59□□□□□ -0.55
NUP98-216ENST00000529379 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
NUP98-216ENST00000529379 POTEMA6NI47 508 aa11.57□□□□□ -0.56
NUP98-216ENST00000529379 POTEGQ6S5H5 508 aa11.57□□□□□ -0.56
NUP98-216ENST00000529379 MLLT3P42568 568 aaPredicted RBP11.56□□□□□ -0.56
NUP98-216ENST00000529379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUP98-216ENST00000529379 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
NUP98-216ENST00000529379 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
NUP98-216ENST00000529379 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
NUP98-216ENST00000529379 TBC1D12O60347 775 aa11.53□□□□□ -0.56
NUP98-216ENST00000529379 PCDHGA4Q9Y5G9 962 aa11.53□□□□□ -0.56
NUP98-216ENST00000529379 EVI5O60447 810 aa11.52□□□□□ -0.57
NUP98-216ENST00000529379 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
NUP98-216ENST00000529379 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
NUP98-216ENST00000529379 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
NUP98-216ENST00000529379 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
NUP98-216ENST00000529379 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
NUP98-216ENST00000529379 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
NUP98-216ENST00000529379 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
NUP98-216ENST00000529379 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
NUP98-216ENST00000529379 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.573e-7■□□□□ 10.1
NUP98-216ENST00000529379 PTGER2P43116 358 aa11.47□□□□□ -0.57
NUP98-216ENST00000529379 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
NUP98-216ENST00000529379 KDM4FA0A1W2PPD8 638 aa11.46□□□□□ -0.57
NUP98-216ENST00000529379 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
NUP98-216ENST00000529379 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
NUP98-216ENST00000529379 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
NUP98-216ENST00000529379 DDX12PQ92771 950 aa11.45□□□□□ -0.58
NUP98-216ENST00000529379 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
NUP98-216ENST00000529379 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
NUP98-216ENST00000529379 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
NUP98-216ENST00000529379 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
NUP98-216ENST00000529379 NUDT7P0C024 238 aa11.42□□□□□ -0.58
NUP98-216ENST00000529379 EMP3P54852 163 aa11.42□□□□□ -0.58
NUP98-216ENST00000529379 OSBPP22059 807 aa11.41□□□□□ -0.58
NUP98-216ENST00000529379 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
NUP98-216ENST00000529379 FAM205CA6NFA0 338 aa11.37□□□□□ -0.59
NUP98-216ENST00000529379 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
NUP98-216ENST00000529379 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
NUP98-216ENST00000529379 PHF14O94880 888 aa11.36□□□□□ -0.59
NUP98-216ENST00000529379 CDAN1Q8IWY9 1227 aa11.35□□□□□ -0.59
NUP98-216ENST00000529379 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
NUP98-216ENST00000529379 GPIHBP1Q8IV16 184 aa11.34□□□□□ -0.59
NUP98-216ENST00000529379 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
NUP98-216ENST00000529379 EPAS1Q99814 870 aa11.33□□□□□ -0.6
NUP98-216ENST00000529379 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
NUP98-216ENST00000529379 FOSBP53539 338 aa11.32□□□□□ -0.6
NUP98-216ENST00000529379 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
NUP98-216ENST00000529379 EN1Q05925 392 aaPredicted RBP11.3□□□□□ -0.6
NUP98-216ENST00000529379 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
NUP98-216ENST00000529379 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
NUP98-216ENST00000529379 ERBB3P21860 1342 aa11.3□□□□□ -0.6
NUP98-216ENST00000529379 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
NUP98-216ENST00000529379 GPR37O15354 613 aa11.29□□□□□ -0.6
NUP98-216ENST00000529379 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
NUP98-216ENST00000529379 ZMYND10O75800 440 aa11.28□□□□□ -0.6
NUP98-216ENST00000529379 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms