RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 SUPT6HQ7KZ85 1726 aaKnown RBP9.62□□□□□ -0.87
MACF1-228ENST00000528611 U3KPZ7 1027 aaPredicted RBP9.62□□□□□ -0.87
MACF1-228ENST00000528611 ABCA9Q8IUA7 1624 aa9.62□□□□□ -0.87
MACF1-228ENST00000528611 MIA2Q96PC5 1412 aa9.61□□□□□ -0.87
MACF1-228ENST00000528611 MAGI3Q5TCQ9 1506 aa9.6□□□□□ -0.87
MACF1-228ENST00000528611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.6□□□□□ -0.87
MACF1-228ENST00000528611 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
MACF1-228ENST00000528611 PLCH2O75038 1416 aa9.59□□□□□ -0.87
MACF1-228ENST00000528611 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
MACF1-228ENST00000528611 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
MACF1-228ENST00000528611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.58□□□□□ -0.88
MACF1-228ENST00000528611 RSPH4AQ5TD94 716 aa9.58□□□□□ -0.88
MACF1-228ENST00000528611 CCNB3Q8WWL7 1395 aa9.58□□□□□ -0.88
MACF1-228ENST00000528611 TEX14Q8IWB6 1497 aa9.58□□□□□ -0.88
MACF1-228ENST00000528611 MAP3K4Q9Y6R4 1608 aa9.57□□□□□ -0.88
MACF1-228ENST00000528611 SPINK5Q9NQ38 1064 aaPredicted RBP9.57□□□□□ -0.88
MACF1-228ENST00000528611 PLEKHH2Q8IVE3 1493 aa9.57□□□□□ -0.88
MACF1-228ENST00000528611 ITSN2Q9NZM3 1697 aa9.57□□□□□ -0.88
MACF1-228ENST00000528611 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 GPATCH8Q9UKJ3 1502 aaKnown RBP9.56□□□□□ -0.88
MACF1-228ENST00000528611 NEO1Q92859 1461 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 FAM69CQ0P6D2 419 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
MACF1-228ENST00000528611 CFAP74Q9C0B2 1584 aa9.55□□□□□ -0.88
MACF1-228ENST00000528611 ARID3CA6NKF2 412 aa9.55□□□□□ -0.88
MACF1-228ENST00000528611 CAPN15O75808 1086 aa9.55□□□□□ -0.88
MACF1-228ENST00000528611 MYO5CQ9NQX4 1742 aa9.55□□□□□ -0.88
MACF1-228ENST00000528611 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
MACF1-228ENST00000528611 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
MACF1-228ENST00000528611 KIF13AQ9H1H9 1805 aa9.54□□□□□ -0.88
MACF1-228ENST00000528611 RRBP1Q9P2E9 1410 aaKnown RBP9.53□□□□□ -0.88
MACF1-228ENST00000528611 TTC37Q6PGP7 1564 aa9.52□□□□□ -0.89
MACF1-228ENST00000528611 TCOF1Q13428 1488 aaKnown RBP9.52□□□□□ -0.89
MACF1-228ENST00000528611 CDC42BPAQ5VT25 1732 aa9.51□□□□□ -0.89
MACF1-228ENST00000528611 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
MACF1-228ENST00000528611 FANCAO15360 1455 aa9.51□□□□□ -0.89
MACF1-228ENST00000528611 CDC42BPBQ9Y5S2 1711 aa9.51□□□□□ -0.89
MACF1-228ENST00000528611 ARHGAP5Q13017 1502 aa9.5□□□□□ -0.89
MACF1-228ENST00000528611 ACIN1Q9UKV3 1341 aaKnown RBP9.5□□□□□ -0.89
MACF1-228ENST00000528611 AKNAQ7Z591 1439 aa9.49□□□□□ -0.89
MACF1-228ENST00000528611 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
MACF1-228ENST00000528611 ARHGEF5Q12774 1597 aa9.48□□□□□ -0.89
MACF1-228ENST00000528611 PTPN23Q9H3S7 1636 aa9.46□□□□□ -0.89
MACF1-228ENST00000528611 PPRC1Q5VV67 1664 aaKnown RBP9.46□□□□□ -0.89
MACF1-228ENST00000528611 RTEL1-TNFRSF6BF6WH68 1400 aa9.46□□□□□ -0.9
MACF1-228ENST00000528611 ADGRL1O94910 1474 aa9.46□□□□□ -0.9
MACF1-228ENST00000528611 ZNF518AQ6AHZ1 1483 aa9.46□□□□□ -0.9
MACF1-228ENST00000528611 MAGI2Q86UL8 1455 aa9.46□□□□□ -0.9
MACF1-228ENST00000528611 MBD5Q9P267 1494 aa9.46□□□□□ -0.9
MACF1-228ENST00000528611 ABCC1P33527 1531 aa9.46□□□□□ -0.9
MACF1-228ENST00000528611 TSPY4P0CV99 314 aa9.45□□□□□ -0.9
MACF1-228ENST00000528611 TSPY10P0CW01 314 aa9.45□□□□□ -0.9
MACF1-228ENST00000528611 DENND4BO75064 1496 aaPredicted RBP9.45□□□□□ -0.9
MACF1-228ENST00000528611 CAMSAP2Q08AD1 1489 aa9.45□□□□□ -0.9
MACF1-228ENST00000528611 SHANK2Q9UPX8 1470 aa9.45□□□□□ -0.9
MACF1-228ENST00000528611 SAMD9LQ8IVG5 1584 aa9.45□□□□□ -0.9
MACF1-228ENST00000528611 TRIM26Q12899 539 aaPredicted RBP9.44□□□□□ -0.9
MACF1-228ENST00000528611 SCAPERQ9BY12 1400 aa9.44□□□□□ -0.9
MACF1-228ENST00000528611 CCDC141Q6ZP82 1450 aa9.44□□□□□ -0.9
MACF1-228ENST00000528611 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
MACF1-228ENST00000528611 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
MACF1-228ENST00000528611 KDM5CP41229 1560 aa9.42□□□□□ -0.9
MACF1-228ENST00000528611 MAST1Q9Y2H9 1570 aa9.42□□□□□ -0.9
MACF1-228ENST00000528611 POGZQ7Z3K3 1410 aa9.42□□□□□ -0.9
MACF1-228ENST00000528611 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
MACF1-228ENST00000528611 ZMYM4Q5VZL5 1548 aa9.41□□□□□ -0.9
MACF1-228ENST00000528611 ZNF777Q9ULD5 760 aaPredicted RBP9.41□□□□□ -0.9
MACF1-228ENST00000528611 ADGRL2O95490 1459 aa9.4□□□□□ -0.9
MACF1-228ENST00000528611 DAPK1P53355 1430 aa9.4□□□□□ -0.9
MACF1-228ENST00000528611 HRCP23327 699 aa9.4□□□□□ -0.9
MACF1-228ENST00000528611 TSPOAP1O95153 1857 aa9.4□□□□□ -0.91
MACF1-228ENST00000528611 SYCP2Q9BX26 1530 aa9.4□□□□□ -0.91
MACF1-228ENST00000528611 ARHGEF12Q9NZN5 1544 aa9.4□□□□□ -0.91
MACF1-228ENST00000528611 ABCC5O15440 1437 aa9.39□□□□□ -0.91
MACF1-228ENST00000528611 ZNF644Q9H582 1327 aaPredicted RBP9.39□□□□□ -0.91
MACF1-228ENST00000528611 HNRNPMP52272 730 aaKnown RBP eCLIP9.39□□□□□ -0.91
MACF1-228ENST00000528611 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
MACF1-228ENST00000528611 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
MACF1-228ENST00000528611 ANKRD30AQ9BXX3 1397 aa9.38□□□□□ -0.91
MACF1-228ENST00000528611 SPAG9O60271 1321 aaKnown RBP9.38□□□□□ -0.91
MACF1-228ENST00000528611 PPARGC1BQ86YN6 1023 aaKnown RBP9.38□□□□□ -0.91
MACF1-228ENST00000528611 TRAPPC8Q9Y2L5 1435 aa9.38□□□□□ -0.91
MACF1-228ENST00000528611 KDM6BO15054 1643 aa9.38□□□□□ -0.91
MACF1-228ENST00000528611 PLXNC1O60486 1568 aa9.37□□□□□ -0.91
MACF1-228ENST00000528611 REREQ9P2R6 1566 aa9.37□□□□□ -0.91
MACF1-228ENST00000528611 CROCC2H7BZ55 1655 aa9.37□□□□□ -0.91
MACF1-228ENST00000528611 NCOA1Q15788 1441 aa9.37□□□□□ -0.91
MACF1-228ENST00000528611 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
MACF1-228ENST00000528611 HECW2Q9P2P5 1572 aa9.37□□□□□ -0.91
MACF1-228ENST00000528611 AFAP1Q8N556 730 aa9.36□□□□□ -0.91
MACF1-228ENST00000528611 INO80Q9ULG1 1556 aaPredicted RBP9.36□□□□□ -0.91
MACF1-228ENST00000528611 ATP7AQ04656 1500 aa9.36□□□□□ -0.91
MACF1-228ENST00000528611 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
MACF1-228ENST00000528611 HFM1A2PYH4 1435 aa9.35□□□□□ -0.91
MACF1-228ENST00000528611 ZFYVE16Q7Z3T8 1539 aa9.35□□□□□ -0.91
MACF1-228ENST00000528611 FRMPD1Q5SYB0 1578 aa9.34□□□□□ -0.91
MACF1-228ENST00000528611 RAPGEF3O95398 923 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms