RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 MLECQ14165 292 aa25.38■■□□□ 1.65
CLNS1A-210ENST00000528364 PLPPR3Q6T4P5 718 aa25.38■■□□□ 1.65
CLNS1A-210ENST00000528364 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
CLNS1A-210ENST00000528364 ZFYVE16Q7Z3T8 1539 aa25.37■■□□□ 1.65
CLNS1A-210ENST00000528364 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
CLNS1A-210ENST00000528364 SIGLEC1Q9BZZ2 1709 aa25.35■■□□□ 1.65
CLNS1A-210ENST00000528364 AFAP1Q8N556 730 aa25.34■■□□□ 1.65
CLNS1A-210ENST00000528364 MYO5CQ9NQX4 1742 aa25.34■■□□□ 1.65
CLNS1A-210ENST00000528364 MAGI2Q86UL8 1455 aa25.33■■□□□ 1.65
CLNS1A-210ENST00000528364 CASKIN1Q8WXD9 1431 aa25.32■■□□□ 1.64
CLNS1A-210ENST00000528364 CLIP1P30622 1438 aa25.31■■□□□ 1.64
CLNS1A-210ENST00000528364 RIMS1Q86UR5 1692 aaKnown RBP25.31■■□□□ 1.64
CLNS1A-210ENST00000528364 ARHGAP5Q13017 1502 aa25.29■■□□□ 1.64
CLNS1A-210ENST00000528364 PCF11O94913 1555 aaKnown RBP25.29■■□□□ 1.64
CLNS1A-210ENST00000528364 ATP10AO60312 1499 aa25.27■■□□□ 1.64
CLNS1A-210ENST00000528364 MYT1LQ9UL68 1186 aa25.25■■□□□ 1.63
CLNS1A-210ENST00000528364 CDC42BPBQ9Y5S2 1711 aa25.23■■□□□ 1.63
CLNS1A-210ENST00000528364 HSPA2P54652 639 aa25.22■■□□□ 1.63
CLNS1A-210ENST00000528364 CCDC18Q5T9S5 1454 aa25.21■■□□□ 1.63
CLNS1A-210ENST00000528364 LMTK3Q96Q04 1460 aa25.21■■□□□ 1.63
CLNS1A-210ENST00000528364 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.63
CLNS1A-210ENST00000528364 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.62
CLNS1A-210ENST00000528364 ARHGEF12Q9NZN5 1544 aa25.18■■□□□ 1.62
CLNS1A-210ENST00000528364 CEBPAP49715 358 aaPredicted RBP25.18■■□□□ 1.62
CLNS1A-210ENST00000528364 TRAPPC8Q9Y2L5 1435 aa25.18■■□□□ 1.62
CLNS1A-210ENST00000528364 FYCO1Q9BQS8 1478 aa25.16■■□□□ 1.62
CLNS1A-210ENST00000528364 ZNF777Q9ULD5 760 aaPredicted RBP25.16■■□□□ 1.62
CLNS1A-210ENST00000528364 KDM5CP41229 1560 aa25.15■■□□□ 1.62
CLNS1A-210ENST00000528364 FER1L4A9Z1Z3 1794 aa25.13■■□□□ 1.61
CLNS1A-210ENST00000528364 PREX2Q70Z35 1606 aa25.13■■□□□ 1.61
CLNS1A-210ENST00000528364 CDC42BPAQ5VT25 1732 aa25.1■■□□□ 1.61
CLNS1A-210ENST00000528364 DIP2CQ9Y2E4 1556 aa25.1■■□□□ 1.61
CLNS1A-210ENST00000528364 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
CLNS1A-210ENST00000528364 ABCC1P33527 1531 aa25.09■■□□□ 1.61
CLNS1A-210ENST00000528364 HNRNPMP52272 730 aaKnown RBP eCLIP25.08■■□□□ 1.61
CLNS1A-210ENST00000528364 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
CLNS1A-210ENST00000528364 ABCA6Q8N139 1617 aa25.06■■□□□ 1.6
CLNS1A-210ENST00000528364 ITSN2Q9NZM3 1697 aa25.06■■□□□ 1.6
CLNS1A-210ENST00000528364 FBXO41Q8TF61 875 aa25.02■■□□□ 1.6
CLNS1A-210ENST00000528364 CFDP1Q9UEE9 299 aaPredicted RBP25.02■■□□□ 1.6
CLNS1A-210ENST00000528364 SAMD9LQ8IVG5 1584 aa25.01■■□□□ 1.59
CLNS1A-210ENST00000528364 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
CLNS1A-210ENST00000528364 MTUS2Q5JR59 1369 aa25■■□□□ 1.59
CLNS1A-210ENST00000528364 CCNB3Q8WWL7 1395 aa25■■□□□ 1.59
CLNS1A-210ENST00000528364 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
CLNS1A-210ENST00000528364 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
CLNS1A-210ENST00000528364 SYCP2Q9BX26 1530 aa24.97■■□□□ 1.59
CLNS1A-210ENST00000528364 ZNF644Q9H582 1327 aaPredicted RBP24.96■■□□□ 1.59
CLNS1A-210ENST00000528364 AGLP35573 1532 aa24.96■■□□□ 1.59
CLNS1A-210ENST00000528364 CEP162Q5TB80 1403 aa24.95■■□□□ 1.59
CLNS1A-210ENST00000528364 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
CLNS1A-210ENST00000528364 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
CLNS1A-210ENST00000528364 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
CLNS1A-210ENST00000528364 KIAA1107Q9UPP5 1409 aa24.91■■□□□ 1.58
CLNS1A-210ENST00000528364 PREX1Q8TCU6 1659 aa24.9■■□□□ 1.58
CLNS1A-210ENST00000528364 C3P01024 1663 aa24.88■■□□□ 1.57
CLNS1A-210ENST00000528364 PLEKHH2Q8IVE3 1493 aa24.87■■□□□ 1.57
CLNS1A-210ENST00000528364 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
CLNS1A-210ENST00000528364 ATP7AQ04656 1500 aa24.85■■□□□ 1.57
CLNS1A-210ENST00000528364 TIAM1Q13009 1591 aa24.84■■□□□ 1.57
CLNS1A-210ENST00000528364 SUPT6HQ7KZ85 1726 aaKnown RBP24.84■■□□□ 1.57
CLNS1A-210ENST00000528364 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
CLNS1A-210ENST00000528364 EHBP1L1Q8N3D4 1523 aa24.82■■□□□ 1.56
CLNS1A-210ENST00000528364 GGT6Q6P531 493 aa24.82■■□□□ 1.56
CLNS1A-210ENST00000528364 CNTLNQ9NXG0 1405 aa24.81■■□□□ 1.56
CLNS1A-210ENST00000528364 STRCQ7RTU9 1775 aa24.81■■□□□ 1.56
CLNS1A-210ENST00000528364 A2MP01023 1474 aa24.81■■□□□ 1.56
CLNS1A-210ENST00000528364 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
CLNS1A-210ENST00000528364 MBD5Q9P267 1494 aa24.8■■□□□ 1.56
CLNS1A-210ENST00000528364 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
CLNS1A-210ENST00000528364 DMRT2Q9Y5R5 561 aa24.78■■□□□ 1.56
CLNS1A-210ENST00000528364 NCOA2Q15596 1464 aa24.76■■□□□ 1.55
CLNS1A-210ENST00000528364 PLXNC1O60486 1568 aa24.74■■□□□ 1.55
CLNS1A-210ENST00000528364 CLTCQ00610 1675 aaKnown RBP24.7■■□□□ 1.54
CLNS1A-210ENST00000528364 RTEL1-TNFRSF6BF6WH68 1400 aa24.69■■□□□ 1.54
CLNS1A-210ENST00000528364 NPATQ14207 1427 aa24.69■■□□□ 1.54
CLNS1A-210ENST00000528364 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
CLNS1A-210ENST00000528364 DHX29Q7Z478 1369 aaKnown RBP24.68■■□□□ 1.54
CLNS1A-210ENST00000528364 KANK4Q5T7N3 995 aaPredicted RBP24.68■■□□□ 1.54
CLNS1A-210ENST00000528364 VPS8Q8N3P4 1428 aa24.68■■□□□ 1.54
CLNS1A-210ENST00000528364 ADGBQ8N7X0 1667 aa24.67■■□□□ 1.54
CLNS1A-210ENST00000528364 CAMSAP2Q08AD1 1489 aa24.67■■□□□ 1.54
CLNS1A-210ENST00000528364 KIF3BO15066 747 aa24.66■■□□□ 1.54
CLNS1A-210ENST00000528364 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
CLNS1A-210ENST00000528364 PTPRTO14522 1441 aa24.66■■□□□ 1.54
CLNS1A-210ENST00000528364 PTPRKQ15262 1439 aa24.66■■□□□ 1.54
CLNS1A-210ENST00000528364 NCKAP5LQ9HCH0 1330 aa24.65■■□□□ 1.54
CLNS1A-210ENST00000528364 NCOA1Q15788 1441 aa24.64■■□□□ 1.54
CLNS1A-210ENST00000528364 RSPH4AQ5TD94 716 aa24.64■■□□□ 1.54
CLNS1A-210ENST00000528364 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
CLNS1A-210ENST00000528364 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
CLNS1A-210ENST00000528364 CAMSAP1Q5T5Y3 1602 aa24.61■■□□□ 1.53
CLNS1A-210ENST00000528364 FBXO31Q5XUX0 539 aaPredicted RBP24.6■■□□□ 1.53
CLNS1A-210ENST00000528364 TSPY4P0CV99 314 aa24.59■■□□□ 1.53
CLNS1A-210ENST00000528364 TSPY10P0CW01 314 aa24.59■■□□□ 1.53
CLNS1A-210ENST00000528364 WASHC2CQ9Y4E1 1318 aa24.54■■□□□ 1.52
CLNS1A-210ENST00000528364 ARHGEF5Q12774 1597 aa24.53■■□□□ 1.52
CLNS1A-210ENST00000528364 LTBP4Q8N2S1 1624 aa24.53■■□□□ 1.52
CLNS1A-210ENST00000528364 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
CLNS1A-210ENST00000528364 CEP170BQ9Y4F5 1589 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms