RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FOXD1Q16676 465 aa19.8■□□□□ 0.76
CAPN1-214ENST00000528165 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
CAPN1-214ENST00000528165 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
CAPN1-214ENST00000528165 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
CAPN1-214ENST00000528165 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
CAPN1-214ENST00000528165 KDM6BO15054 1643 aa19.78■□□□□ 0.76
CAPN1-214ENST00000528165 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
CAPN1-214ENST00000528165 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
CAPN1-214ENST00000528165 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
CAPN1-214ENST00000528165 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-214ENST00000528165 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
CAPN1-214ENST00000528165 POLR1AO95602 1720 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-214ENST00000528165 RPRD2Q5VT52 1461 aaKnown RBP19.74■□□□□ 0.75
CAPN1-214ENST00000528165 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
CAPN1-214ENST00000528165 ANKRD30BQ9BXX2 1392 aa19.72■□□□□ 0.75
CAPN1-214ENST00000528165 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
CAPN1-214ENST00000528165 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
CAPN1-214ENST00000528165 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
CAPN1-214ENST00000528165 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
CAPN1-214ENST00000528165 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-214ENST00000528165 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
CAPN1-214ENST00000528165 MIA2Q96PC5 1412 aa19.67■□□□□ 0.74
CAPN1-214ENST00000528165 NPM2Q86SE8 214 aaKnown RBP19.66■□□□□ 0.74
CAPN1-214ENST00000528165 SENP3-EIF4A1A0A087X0R7 540 aa19.64■□□□□ 0.73
CAPN1-214ENST00000528165 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CAPN1-214ENST00000528165 KIF21AQ7Z4S6 1674 aa19.63■□□□□ 0.73
CAPN1-214ENST00000528165 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
CAPN1-214ENST00000528165 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
CAPN1-214ENST00000528165 IL27Q8NEV9 243 aa19.62■□□□□ 0.73
CAPN1-214ENST00000528165 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
CAPN1-214ENST00000528165 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
CAPN1-214ENST00000528165 ROCK1Q13464 1354 aa19.6■□□□□ 0.73
CAPN1-214ENST00000528165 NEFMP07197 916 aa19.6■□□□□ 0.73
CAPN1-214ENST00000528165 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-214ENST00000528165 USP47Q96K76 1375 aa19.59■□□□□ 0.73
CAPN1-214ENST00000528165 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.73
CAPN1-214ENST00000528165 ARID4BQ4LE39 1312 aaPredicted RBP19.58■□□□□ 0.72
CAPN1-214ENST00000528165 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
CAPN1-214ENST00000528165 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
CAPN1-214ENST00000528165 EPRSP07814 1512 aaKnown RBP19.57■□□□□ 0.72
CAPN1-214ENST00000528165 PDE4AP27815 886 aa19.57■□□□□ 0.72
CAPN1-214ENST00000528165 DAPK1P53355 1430 aa19.57■□□□□ 0.72
CAPN1-214ENST00000528165 ZNF326Q5BKZ1 582 aaKnown RBP19.56■□□□□ 0.72
CAPN1-214ENST00000528165 EXOC6Q8TAG9 804 aa19.55■□□□□ 0.72
CAPN1-214ENST00000528165 BCORL1Q5H9F3 1711 aa19.55■□□□□ 0.72
CAPN1-214ENST00000528165 RTN4Q9NQC3 1192 aaKnown RBP19.55■□□□□ 0.72
CAPN1-214ENST00000528165 NESP48681 1621 aa19.54■□□□□ 0.72
CAPN1-214ENST00000528165 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
CAPN1-214ENST00000528165 ROCK2O75116 1388 aaKnown RBP19.54■□□□□ 0.72
CAPN1-214ENST00000528165 PPM1GO15355 546 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-214ENST00000528165 MS4A1P11836 297 aa19.52■□□□□ 0.72
CAPN1-214ENST00000528165 BACH2Q9BYV9 841 aa19.52■□□□□ 0.72
CAPN1-214ENST00000528165 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
CAPN1-214ENST00000528165 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.71
CAPN1-214ENST00000528165 LRPPRCP42704 1394 aaKnown RBP19.51■□□□□ 0.71
CAPN1-214ENST00000528165 ABCC5O15440 1437 aa19.51■□□□□ 0.71
CAPN1-214ENST00000528165 MBD5Q9P267 1494 aa19.51■□□□□ 0.71
CAPN1-214ENST00000528165 KIF15Q9NS87 1388 aa19.5■□□□□ 0.71
CAPN1-214ENST00000528165 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
CAPN1-214ENST00000528165 BRD4O60885 1362 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-214ENST00000528165 DNMT1P26358 1616 aaKnown RBP19.48■□□□□ 0.71
CAPN1-214ENST00000528165 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
CAPN1-214ENST00000528165 MYBBP1AQ9BQG0 1328 aaKnown RBP19.47■□□□□ 0.71
CAPN1-214ENST00000528165 KDM5CP41229 1560 aa19.47■□□□□ 0.71
CAPN1-214ENST00000528165 WASHC2CQ9Y4E1 1318 aa19.47■□□□□ 0.71
CAPN1-214ENST00000528165 KIF14Q15058 1648 aa19.47■□□□□ 0.71
CAPN1-214ENST00000528165 PZPP20742 1482 aa19.46■□□□□ 0.71
CAPN1-214ENST00000528165 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
CAPN1-214ENST00000528165 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
CAPN1-214ENST00000528165 RALBP1Q15311 655 aa19.45■□□□□ 0.7
CAPN1-214ENST00000528165 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-214ENST00000528165 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
CAPN1-214ENST00000528165 KIAA1107Q9UPP5 1409 aa19.43■□□□□ 0.7
CAPN1-214ENST00000528165 WDR62O43379 1518 aa19.43■□□□□ 0.7
CAPN1-214ENST00000528165 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
CAPN1-214ENST00000528165 CARD11Q9BXL7 1154 aa19.42■□□□□ 0.7
CAPN1-214ENST00000528165 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
CAPN1-214ENST00000528165 PKD2Q13563 968 aa19.39■□□□□ 0.69
CAPN1-214ENST00000528165 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
CAPN1-214ENST00000528165 GSE1Q14687 1217 aa19.37■□□□□ 0.69
CAPN1-214ENST00000528165 UHRF1BP1Q6BDS2 1440 aa19.36■□□□□ 0.69
CAPN1-214ENST00000528165 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-214ENST00000528165 NLRP13Q86W25 1043 aa19.35■□□□□ 0.69
CAPN1-214ENST00000528165 ST20-MTHFSA0A0A6YYL1 179 aa19.35■□□□□ 0.69
CAPN1-214ENST00000528165 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.69
CAPN1-214ENST00000528165 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.68
CAPN1-214ENST00000528165 CDCA7LQ96GN5 454 aa19.32■□□□□ 0.68
CAPN1-214ENST00000528165 PLIN1O60240 522 aa19.32■□□□□ 0.68
CAPN1-214ENST00000528165 NFKBIBQ15653 356 aa19.32■□□□□ 0.68
CAPN1-214ENST00000528165 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
CAPN1-214ENST00000528165 SKAP1Q86WV1 359 aa19.29■□□□□ 0.68
CAPN1-214ENST00000528165 CFDP1Q9UEE9 299 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-214ENST00000528165 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
CAPN1-214ENST00000528165 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
CAPN1-214ENST00000528165 ADGBQ8N7X0 1667 aa19.28■□□□□ 0.68
CAPN1-214ENST00000528165 ARHGEF12Q9NZN5 1544 aa19.28■□□□□ 0.68
CAPN1-214ENST00000528165 PARD3Q8TEW0 1356 aa19.28■□□□□ 0.68
CAPN1-214ENST00000528165 E9PCH4 1651 aa19.27■□□□□ 0.68
CAPN1-214ENST00000528165 ANKRD30AQ9BXX3 1397 aa19.26■□□□□ 0.67
CAPN1-214ENST00000528165 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms