RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 ARHGEF40Q8TER5 1519 aa37.24■■■■□ 3.55
PKP3-206ENST00000528036 LRRIQ1Q96JM4 1722 aa37.21■■■■□ 3.55
PKP3-206ENST00000528036 ARHGAP5Q13017 1502 aa37.2■■■■□ 3.55
PKP3-206ENST00000528036 ZFYVE16Q7Z3T8 1539 aa37.17■■■■□ 3.54
PKP3-206ENST00000528036 ZNF518AQ6AHZ1 1483 aa37.13■■■■□ 3.53
PKP3-206ENST00000528036 ADAMTSL3P82987 1691 aa37.12■■■■□ 3.53
PKP3-206ENST00000528036 CEP162Q5TB80 1403 aa37.09■■■■□ 3.53
PKP3-206ENST00000528036 YEATS2Q9ULM3 1422 aa37.08■■■■□ 3.53
PKP3-206ENST00000528036 BCORL1Q5H9F3 1711 aa37.07■■■■□ 3.53
PKP3-206ENST00000528036 PTPRMP28827 1452 aa37.06■■■■□ 3.52
PKP3-206ENST00000528036 ATP10AO60312 1499 aa37.04■■■■□ 3.52
PKP3-206ENST00000528036 PREX2Q70Z35 1606 aa37.03■■■■□ 3.52
PKP3-206ENST00000528036 AFAP1Q8N556 730 aa37.01■■■■□ 3.52
PKP3-206ENST00000528036 MTUS2Q5JR59 1369 aa37■■■■□ 3.51
PKP3-206ENST00000528036 C9orf84Q5VXU9 1444 aa36.99■■■■□ 3.51
PKP3-206ENST00000528036 CDC42BPBQ9Y5S2 1711 aa36.99■■■■□ 3.51
PKP3-206ENST00000528036 KDM5CP41229 1560 aa36.98■■■■□ 3.51
PKP3-206ENST00000528036 MYT1LQ9UL68 1186 aa36.97■■■■□ 3.51
PKP3-206ENST00000528036 HECW2Q9P2P5 1572 aa36.95■■■■□ 3.51
PKP3-206ENST00000528036 MLH3Q9UHC1 1453 aa36.94■■■■□ 3.5
PKP3-206ENST00000528036 ABCC1P33527 1531 aa36.93■■■■□ 3.5
PKP3-206ENST00000528036 MADDQ8WXG6 1647 aa36.92■■■■□ 3.5
PKP3-206ENST00000528036 GPATCH8Q9UKJ3 1502 aaKnown RBP36.92■■■■□ 3.5
PKP3-206ENST00000528036 CCNB3Q8WWL7 1395 aa36.91■■■■□ 3.5
PKP3-206ENST00000528036 CFDP1Q9UEE9 299 aaPredicted RBP36.89■■■■□ 3.5
PKP3-206ENST00000528036 CDC42BPAQ5VT25 1732 aa36.88■■■■□ 3.49
PKP3-206ENST00000528036 PLEKHH2Q8IVE3 1493 aa36.87■■■■□ 3.49
PKP3-206ENST00000528036 ZNF777Q9ULD5 760 aaPredicted RBP36.86■■■■□ 3.49
PKP3-206ENST00000528036 TRAPPC8Q9Y2L5 1435 aa36.85■■■■□ 3.49
PKP3-206ENST00000528036 KIAA1107Q9UPP5 1409 aa36.85■■■■□ 3.49
PKP3-206ENST00000528036 MLECQ14165 292 aa36.84■■■■□ 3.49
PKP3-206ENST00000528036 ARHGEF12Q9NZN5 1544 aa36.84■■■■□ 3.49
PKP3-206ENST00000528036 EHBP1L1Q8N3D4 1523 aa36.83■■■■□ 3.49
PKP3-206ENST00000528036 LOC105371045A0A1W2PR82 267 aa36.82■■■■□ 3.48
PKP3-206ENST00000528036 REREQ9P2R6 1566 aa36.81■■■■□ 3.48
PKP3-206ENST00000528036 ITSN2Q9NZM3 1697 aa36.8■■■■□ 3.48
PKP3-206ENST00000528036 RIMS1Q86UR5 1692 aaKnown RBP36.77■■■■□ 3.48
PKP3-206ENST00000528036 DIP2CQ9Y2E4 1556 aa36.75■■■■□ 3.47
PKP3-206ENST00000528036 SIGLEC1Q9BZZ2 1709 aa36.74■■■■□ 3.47
PKP3-206ENST00000528036 VPS8Q8N3P4 1428 aa36.74■■■■□ 3.47
PKP3-206ENST00000528036 SAMD9LQ8IVG5 1584 aa36.74■■■■□ 3.47
PKP3-206ENST00000528036 SPAG9O60271 1321 aaKnown RBP36.73■■■■□ 3.47
PKP3-206ENST00000528036 HNRNPMP52272 730 aaKnown RBP eCLIP36.72■■■■□ 3.47
PKP3-206ENST00000528036 AGLP35573 1532 aa36.71■■■■□ 3.47
PKP3-206ENST00000528036 SYCP2Q9BX26 1530 aa36.69■■■■□ 3.46
PKP3-206ENST00000528036 ABCA6Q8N139 1617 aa36.67■■■■□ 3.46
PKP3-206ENST00000528036 FER1L4A9Z1Z3 1794 aa36.66■■■■□ 3.46
PKP3-206ENST00000528036 ESF1Q9H501 851 aaKnown RBP36.65■■■■□ 3.46
PKP3-206ENST00000528036 TIAM1Q13009 1591 aa36.64■■■■□ 3.46
PKP3-206ENST00000528036 KIDINS220Q9ULH0 1771 aa36.63■■■■□ 3.45
PKP3-206ENST00000528036 LMTK3Q96Q04 1460 aa36.61■■■■□ 3.45
PKP3-206ENST00000528036 RSPH4AQ5TD94 716 aa36.6■■■■□ 3.45
PKP3-206ENST00000528036 PLPPR3Q6T4P5 718 aa36.59■■■■□ 3.45
PKP3-206ENST00000528036 NCOA2Q15596 1464 aa36.58■■■■□ 3.45
PKP3-206ENST00000528036 SUPT6HQ7KZ85 1726 aaKnown RBP36.57■■■■□ 3.45
PKP3-206ENST00000528036 MAP3K1Q13233 1512 aa36.57■■■■□ 3.44
PKP3-206ENST00000528036 ATP7AQ04656 1500 aa36.54■■■■□ 3.44
PKP3-206ENST00000528036 CNTLNQ9NXG0 1405 aa36.54■■■■□ 3.44
PKP3-206ENST00000528036 ZNF644Q9H582 1327 aaPredicted RBP36.53■■■■□ 3.44
PKP3-206ENST00000528036 MBD5Q9P267 1494 aa36.52■■■■□ 3.44
PKP3-206ENST00000528036 LRRC9Q6ZRR7 1453 aa36.51■■■■□ 3.44
PKP3-206ENST00000528036 RTEL1-TNFRSF6BF6WH68 1400 aa36.51■■■■□ 3.43
PKP3-206ENST00000528036 INO80Q9ULG1 1556 aaPredicted RBP36.49■■■■□ 3.43
PKP3-206ENST00000528036 A2MP01023 1474 aa36.48■■■■□ 3.43
PKP3-206ENST00000528036 CEBPAP49715 358 aaPredicted RBP36.46■■■■□ 3.43
PKP3-206ENST00000528036 APLP2Q06481 763 aa36.45■■■■□ 3.43
PKP3-206ENST00000528036 PPP6R1Q9UPN7 881 aa36.45■■■■□ 3.43
PKP3-206ENST00000528036 CCDC141Q6ZP82 1450 aa36.41■■■■□ 3.42
PKP3-206ENST00000528036 CAMSAP2Q08AD1 1489 aa36.39■■■■□ 3.42
PKP3-206ENST00000528036 SETD1BQ9UPS6 1966 aaKnown RBP36.39■■■■□ 3.42
PKP3-206ENST00000528036 PLXNC1O60486 1568 aa36.39■■■■□ 3.42
PKP3-206ENST00000528036 HSPA2P54652 639 aa36.38■■■■□ 3.41
PKP3-206ENST00000528036 UHRF1BP1Q6BDS2 1440 aa36.38■■■■□ 3.41
PKP3-206ENST00000528036 TSPY4P0CV99 314 aa36.37■■■■□ 3.41
PKP3-206ENST00000528036 TSPY10P0CW01 314 aa36.37■■■■□ 3.41
PKP3-206ENST00000528036 PREX1Q8TCU6 1659 aa36.35■■■■□ 3.41
PKP3-206ENST00000528036 DHX29Q7Z478 1369 aaKnown RBP36.34■■■■□ 3.41
PKP3-206ENST00000528036 ADGBQ8N7X0 1667 aa36.34■■■■□ 3.41
PKP3-206ENST00000528036 KANK4Q5T7N3 995 aaPredicted RBP36.33■■■■□ 3.41
PKP3-206ENST00000528036 MIA2Q96PC5 1412 aa36.33■■■■□ 3.41
PKP3-206ENST00000528036 ARHGEF5Q12774 1597 aa36.3■■■■□ 3.4
PKP3-206ENST00000528036 ZMYM3Q14202 1370 aa36.29■■■■□ 3.4
PKP3-206ENST00000528036 GGT6Q6P531 493 aa36.29■■■■□ 3.4
PKP3-206ENST00000528036 NPATQ14207 1427 aa36.28■■■■□ 3.4
PKP3-206ENST00000528036 ILDR1Q86SU0 546 aaPredicted RBP36.28■■■■□ 3.4
PKP3-206ENST00000528036 C3P01024 1663 aa36.28■■■■□ 3.4
PKP3-206ENST00000528036 MYOM3Q5VTT5 1437 aa36.27■■■■□ 3.4
PKP3-206ENST00000528036 DMRT2Q9Y5R5 561 aa36.27■■■■□ 3.4
PKP3-206ENST00000528036 MROH2AA6NES4 1674 aa36.26■■■■□ 3.4
PKP3-206ENST00000528036 KIF3BO15066 747 aa36.17■■■■□ 3.38
PKP3-206ENST00000528036 FAM135AQ9P2D6 1515 aa36.15■■■■□ 3.38
PKP3-206ENST00000528036 FBXO41Q8TF61 875 aa36.11■■■■□ 3.37
PKP3-206ENST00000528036 MAST1Q9Y2H9 1570 aa36.1■■■■□ 3.37
PKP3-206ENST00000528036 CLTCQ00610 1675 aaKnown RBP36.09■■■■□ 3.37
PKP3-206ENST00000528036 PTPRKQ15262 1439 aa36.08■■■■□ 3.37
PKP3-206ENST00000528036 WASHC2CQ9Y4E1 1318 aa36.05■■■■□ 3.36
PKP3-206ENST00000528036 PTPRTO14522 1441 aa36.01■■■■□ 3.36
PKP3-206ENST00000528036 KDM5DQ9BY66 1539 aa36■■■■□ 3.35
PKP3-206ENST00000528036 NCOA1Q15788 1441 aa35.97■■■■□ 3.35
PKP3-206ENST00000528036 FGD6Q6ZV73 1430 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms