RNA–Protein interactions for RNA: ENST00000527952.1

PTPRJ-205, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 5

Gene PTPRJ, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-205ENST00000527952 KIF14Q15058 1648 aa39.55■■■■□ 3.92
PTPRJ-205ENST00000527952 CDK11AQ9UQ88 783 aaPredicted RBP39.53■■■■□ 3.92
PTPRJ-205ENST00000527952 LRRIQ1Q96JM4 1722 aa39.53■■■■□ 3.92
PTPRJ-205ENST00000527952 MYO5CQ9NQX4 1742 aa39.53■■■■□ 3.92
PTPRJ-205ENST00000527952 MLECQ14165 292 aa39.5■■■■□ 3.91
PTPRJ-205ENST00000527952 POGZQ7Z3K3 1410 aa39.49■■■■□ 3.91
PTPRJ-205ENST00000527952 EFCAB2Q5VUJ9 269 aa39.48■■■■□ 3.91
PTPRJ-205ENST00000527952 TROQ12816 1431 aaPredicted RBP39.45■■■■□ 3.91
PTPRJ-205ENST00000527952 MAGI2Q86UL8 1455 aa39.44■■■■□ 3.9
PTPRJ-205ENST00000527952 PCF11O94913 1555 aaKnown RBP39.42■■■■□ 3.9
PTPRJ-205ENST00000527952 LMTK3Q96Q04 1460 aa39.38■■■■□ 3.9
PTPRJ-205ENST00000527952 ARHGAP5Q13017 1502 aa39.38■■■■□ 3.89
PTPRJ-205ENST00000527952 CLIP1P30622 1438 aa39.37■■■■□ 3.89
PTPRJ-205ENST00000527952 ATP10AO60312 1499 aa39.32■■■■□ 3.89
PTPRJ-205ENST00000527952 AFAP1Q8N556 730 aa39.32■■■■□ 3.89
PTPRJ-205ENST00000527952 FER1L4A9Z1Z3 1794 aa39.31■■■■□ 3.88
PTPRJ-205ENST00000527952 HSPA2P54652 639 aa39.31■■■■□ 3.88
PTPRJ-205ENST00000527952 CDC42BPBQ9Y5S2 1711 aa39.28■■■■□ 3.88
PTPRJ-205ENST00000527952 MYT1LQ9UL68 1186 aa39.28■■■■□ 3.88
PTPRJ-205ENST00000527952 C9orf84Q5VXU9 1444 aa39.27■■■■□ 3.88
PTPRJ-205ENST00000527952 CASKIN1Q8WXD9 1431 aa39.27■■■■□ 3.88
PTPRJ-205ENST00000527952 ZNF518AQ6AHZ1 1483 aa39.24■■■■□ 3.87
PTPRJ-205ENST00000527952 CCDC18Q5T9S5 1454 aa39.2■■■■□ 3.87
PTPRJ-205ENST00000527952 KDM5CP41229 1560 aa39.19■■■■□ 3.86
PTPRJ-205ENST00000527952 ARHGEF12Q9NZN5 1544 aa39.18■■■■□ 3.86
PTPRJ-205ENST00000527952 PREX2Q70Z35 1606 aa39.17■■■■□ 3.86
PTPRJ-205ENST00000527952 CEBPAP49715 358 aaPredicted RBP39.16■■■■□ 3.86
PTPRJ-205ENST00000527952 DIP2CQ9Y2E4 1556 aa39.12■■■■□ 3.85
PTPRJ-205ENST00000527952 FBXO41Q8TF61 875 aa39.12■■■■□ 3.85
PTPRJ-205ENST00000527952 TRAPPC8Q9Y2L5 1435 aa39.12■■■■□ 3.85
PTPRJ-205ENST00000527952 CDC42BPAQ5VT25 1732 aa39.09■■■■□ 3.85
PTPRJ-205ENST00000527952 FYCO1Q9BQS8 1478 aa39.09■■■■□ 3.85
PTPRJ-205ENST00000527952 ABCC1P33527 1531 aa39.09■■■■□ 3.85
PTPRJ-205ENST00000527952 ABCA6Q8N139 1617 aa39.08■■■■□ 3.85
PTPRJ-205ENST00000527952 ITSN2Q9NZM3 1697 aa39.07■■■■□ 3.85
PTPRJ-205ENST00000527952 ZNF777Q9ULD5 760 aaPredicted RBP39.04■■■■□ 3.84
PTPRJ-205ENST00000527952 MLH3Q9UHC1 1453 aa39.03■■■■□ 3.84
PTPRJ-205ENST00000527952 PREX1Q8TCU6 1659 aa38.96■■■■□ 3.83
PTPRJ-205ENST00000527952 REREQ9P2R6 1566 aa38.95■■■■□ 3.83
PTPRJ-205ENST00000527952 KIDINS220Q9ULH0 1771 aa38.95■■■■□ 3.83
PTPRJ-205ENST00000527952 SAMD9LQ8IVG5 1584 aa38.92■■■■□ 3.82
PTPRJ-205ENST00000527952 GPATCH8Q9UKJ3 1502 aaKnown RBP38.91■■■■□ 3.82
PTPRJ-205ENST00000527952 HNRNPMP52272 730 aaKnown RBP eCLIP38.89■■■■□ 3.828e-7■■■■□ 23
PTPRJ-205ENST00000527952 SYCP2Q9BX26 1530 aa38.88■■■■□ 3.81
PTPRJ-205ENST00000527952 AGLP35573 1532 aa38.86■■■■□ 3.81
PTPRJ-205ENST00000527952 ESF1Q9H501 851 aaKnown RBP38.85■■■■□ 3.81
PTPRJ-205ENST00000527952 C3P01024 1663 aa38.84■■■■□ 3.81
PTPRJ-205ENST00000527952 SETD1BQ9UPS6 1966 aaKnown RBP38.81■■■■□ 3.8
PTPRJ-205ENST00000527952 UHRF1BP1Q6BDS2 1440 aa38.8■■■■□ 3.8
PTPRJ-205ENST00000527952 CFDP1Q9UEE9 299 aaPredicted RBP38.8■■■■□ 3.8
PTPRJ-205ENST00000527952 SPAG9O60271 1321 aaKnown RBP38.8■■■■□ 3.8
PTPRJ-205ENST00000527952 MTUS2Q5JR59 1369 aa38.79■■■■□ 3.8
PTPRJ-205ENST00000527952 CCNB3Q8WWL7 1395 aa38.79■■■■□ 3.8
PTPRJ-205ENST00000527952 STRCQ7RTU9 1775 aa38.76■■■■□ 3.8
PTPRJ-205ENST00000527952 CERKQ8TCT0 537 aa38.76■■■■□ 3.8
PTPRJ-205ENST00000527952 SUPT6HQ7KZ85 1726 aaKnown RBP38.75■■■■□ 3.79
PTPRJ-205ENST00000527952 ATP7AQ04656 1500 aa38.68■■■■□ 3.78
PTPRJ-205ENST00000527952 ZNF644Q9H582 1327 aaPredicted RBP38.67■■■■□ 3.78
PTPRJ-205ENST00000527952 KIAA1107Q9UPP5 1409 aa38.67■■■■□ 3.78
PTPRJ-205ENST00000527952 PLEKHH2Q8IVE3 1493 aa38.66■■■■□ 3.78
PTPRJ-205ENST00000527952 CEP162Q5TB80 1403 aa38.64■■■■□ 3.78
PTPRJ-205ENST00000527952 CNTLNQ9NXG0 1405 aa38.63■■■■□ 3.78
PTPRJ-205ENST00000527952 TIAM1Q13009 1591 aa38.63■■■■□ 3.77
PTPRJ-205ENST00000527952 INO80Q9ULG1 1556 aaPredicted RBP38.63■■■■□ 3.77
PTPRJ-205ENST00000527952 DMRT2Q9Y5R5 561 aa38.61■■■■□ 3.77
PTPRJ-205ENST00000527952 EHBP1L1Q8N3D4 1523 aa38.59■■■■□ 3.77
PTPRJ-205ENST00000527952 A2MP01023 1474 aa38.59■■■■□ 3.77
PTPRJ-205ENST00000527952 ZMYM3Q14202 1370 aa38.57■■■■□ 3.76
PTPRJ-205ENST00000527952 CLTCQ00610 1675 aaKnown RBP38.56■■■■□ 3.76
PTPRJ-205ENST00000527952 GGT6Q6P531 493 aa38.55■■■■□ 3.76
PTPRJ-205ENST00000527952 MROH2AA6NES4 1674 aa38.55■■■■□ 3.76
PTPRJ-205ENST00000527952 PLXNC1O60486 1568 aa38.54■■■■□ 3.76
PTPRJ-205ENST00000527952 MBD5Q9P267 1494 aa38.49■■■■□ 3.75
PTPRJ-205ENST00000527952 ADGBQ8N7X0 1667 aa38.46■■■■□ 3.75
PTPRJ-205ENST00000527952 PTPRTO14522 1441 aa38.46■■■■□ 3.75
PTPRJ-205ENST00000527952 NPATQ14207 1427 aa38.45■■■■□ 3.75
PTPRJ-205ENST00000527952 NCOA1Q15788 1441 aa38.43■■■■□ 3.74
PTPRJ-205ENST00000527952 CAMSAP1Q5T5Y3 1602 aa38.41■■■■□ 3.74
PTPRJ-205ENST00000527952 LOC105371045A0A1W2PR82 267 aa38.41■■■■□ 3.74
PTPRJ-205ENST00000527952 NCOA2Q15596 1464 aa38.41■■■■□ 3.74
PTPRJ-205ENST00000527952 NCKAP5LQ9HCH0 1330 aa38.37■■■■□ 3.73
PTPRJ-205ENST00000527952 PTPRKQ15262 1439 aa38.36■■■■□ 3.73
PTPRJ-205ENST00000527952 CAMSAP2Q08AD1 1489 aa38.35■■■■□ 3.73
PTPRJ-205ENST00000527952 RTEL1-TNFRSF6BF6WH68 1400 aa38.34■■■■□ 3.73
PTPRJ-205ENST00000527952 MYO3AQ8NEV4 1616 aa38.34■■■■□ 3.73
PTPRJ-205ENST00000527952 DHX29Q7Z478 1369 aaKnown RBP38.31■■■■□ 3.72
PTPRJ-205ENST00000527952 CCDC141Q6ZP82 1450 aa38.29■■■■□ 3.72
PTPRJ-205ENST00000527952 LTBP4Q8N2S1 1624 aa38.29■■■■□ 3.72
PTPRJ-205ENST00000527952 KIF3BO15066 747 aa38.28■■■■□ 3.72
PTPRJ-205ENST00000527952 PPP6R1Q9UPN7 881 aa38.26■■■■□ 3.72
PTPRJ-205ENST00000527952 CEP170BQ9Y4F5 1589 aaPredicted RBP38.26■■■■□ 3.72
PTPRJ-205ENST00000527952 ZNF142P52746 1687 aaPredicted RBP38.26■■■■□ 3.71
PTPRJ-205ENST00000527952 VPS8Q8N3P4 1428 aa38.21■■■■□ 3.71
PTPRJ-205ENST00000527952 FBXO31Q5XUX0 539 aaPredicted RBP38.19■■■■□ 3.7
PTPRJ-205ENST00000527952 LRRC9Q6ZRR7 1453 aa38.18■■■■□ 3.7
PTPRJ-205ENST00000527952 RSPH4AQ5TD94 716 aa38.17■■■■□ 3.7
PTPRJ-205ENST00000527952 ZNF335Q9H4Z2 1342 aaPredicted RBP38.16■■■■□ 3.7
PTPRJ-205ENST00000527952 KANK4Q5T7N3 995 aaPredicted RBP38.15■■■■□ 3.7
PTPRJ-205ENST00000527952 PLA2R1Q13018 1463 aa38.14■■■■□ 3.7
PTPRJ-205ENST00000527952 TSPY4P0CV99 314 aa38.13■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms