RNA–Protein interactions for RNA: ENST00000527934.1

SORL1-206, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-206ENST00000527934 NUP160Q12769 1436 aa15.73■□□□□ 0.11
SORL1-206ENST00000527934 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
SORL1-206ENST00000527934 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
SORL1-206ENST00000527934 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.1
SORL1-206ENST00000527934 KDM6BO15054 1643 aa15.7■□□□□ 0.1
SORL1-206ENST00000527934 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
SORL1-206ENST00000527934 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
SORL1-206ENST00000527934 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
SORL1-206ENST00000527934 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
SORL1-206ENST00000527934 ABCC5O15440 1437 aa15.66■□□□□ 0.1
SORL1-206ENST00000527934 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
SORL1-206ENST00000527934 DAPK1P53355 1430 aa15.66■□□□□ 0.1
SORL1-206ENST00000527934 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
SORL1-206ENST00000527934 KIF14Q15058 1648 aa15.63■□□□□ 0.09
SORL1-206ENST00000527934 PTPRGP23470 1445 aa15.62■□□□□ 0.09
SORL1-206ENST00000527934 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
SORL1-206ENST00000527934 DENND4BO75064 1496 aaPredicted RBP15.62■□□□□ 0.09
SORL1-206ENST00000527934 ATP10BO94823 1461 aa15.61■□□□□ 0.09
SORL1-206ENST00000527934 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
SORL1-206ENST00000527934 GPATCH8Q9UKJ3 1502 aaKnown RBP15.61■□□□□ 0.09
SORL1-206ENST00000527934 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
SORL1-206ENST00000527934 HNRNPMP52272 730 aaKnown RBP eCLIP15.58■□□□□ 0.08
SORL1-206ENST00000527934 L3MBTL2Q969R5 705 aa15.57■□□□□ 0.08
SORL1-206ENST00000527934 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
SORL1-206ENST00000527934 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
SORL1-206ENST00000527934 ABCA8O94911 1581 aa15.55■□□□□ 0.08
SORL1-206ENST00000527934 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
SORL1-206ENST00000527934 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
SORL1-206ENST00000527934 ROCK1Q13464 1354 aa15.53■□□□□ 0.08
SORL1-206ENST00000527934 CHD1O14646 1710 aa15.53■□□□□ 0.08
SORL1-206ENST00000527934 ERCC6L2Q5T890 1561 aa15.52■□□□□ 0.08
SORL1-206ENST00000527934 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
SORL1-206ENST00000527934 HSPA5P11021 654 aaKnown RBP15.5■□□□□ 0.07
SORL1-206ENST00000527934 KDM5BQ9UGL1 1544 aa15.49■□□□□ 0.07
SORL1-206ENST00000527934 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
SORL1-206ENST00000527934 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
SORL1-206ENST00000527934 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
SORL1-206ENST00000527934 PKD2Q13563 968 aa15.48■□□□□ 0.07
SORL1-206ENST00000527934 NBPF8Q3BBV2 869 aa15.48■□□□□ 0.07
SORL1-206ENST00000527934 ANKRD30BQ9BXX2 1392 aa15.48■□□□□ 0.07
SORL1-206ENST00000527934 ABCC10Q5T3U5 1492 aa15.47■□□□□ 0.07
SORL1-206ENST00000527934 ANKRD30AQ9BXX3 1397 aa15.47■□□□□ 0.07
SORL1-206ENST00000527934 UBE2Q2Q8WVN8 375 aa15.46■□□□□ 0.06
SORL1-206ENST00000527934 ITSN2Q9NZM3 1697 aa15.45■□□□□ 0.06
SORL1-206ENST00000527934 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
SORL1-206ENST00000527934 ANP32CO43423 234 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 NUP155O75694 1391 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 PZPP20742 1482 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 CDC42BPAQ5VT25 1732 aa15.43■□□□□ 0.06
SORL1-206ENST00000527934 EIF4G2P78344 907 aaKnown RBP eCLIP15.42■□□□□ 0.06
SORL1-206ENST00000527934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.061e-7■□□□□ 10.1
SORL1-206ENST00000527934 C11orf95C9JLR9 678 aaPredicted RBP15.41■□□□□ 0.06
SORL1-206ENST00000527934 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
SORL1-206ENST00000527934 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
SORL1-206ENST00000527934 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
SORL1-206ENST00000527934 RPRD2Q5VT52 1461 aaKnown RBP15.39■□□□□ 0.05
SORL1-206ENST00000527934 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
SORL1-206ENST00000527934 POLR3GLQ9BT43 218 aa15.37■□□□□ 0.05
SORL1-206ENST00000527934 ADGRL2O95490 1459 aa15.37■□□□□ 0.05
SORL1-206ENST00000527934 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
SORL1-206ENST00000527934 KIAA1107Q9UPP5 1409 aa15.35■□□□□ 0.05
SORL1-206ENST00000527934 ARHGAP5Q13017 1502 aa15.35■□□□□ 0.05
SORL1-206ENST00000527934 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
SORL1-206ENST00000527934 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
SORL1-206ENST00000527934 CROCC2H7BZ55 1655 aa15.34■□□□□ 0.05
SORL1-206ENST00000527934 TEX14Q8IWB6 1497 aa15.33■□□□□ 0.05
SORL1-206ENST00000527934 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.05
SORL1-206ENST00000527934 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.05
SORL1-206ENST00000527934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.32■□□□□ 0.04
SORL1-206ENST00000527934 ABCC2Q92887 1545 aa15.32■□□□□ 0.04
SORL1-206ENST00000527934 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
SORL1-206ENST00000527934 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
SORL1-206ENST00000527934 CCDC141Q6ZP82 1450 aa15.31■□□□□ 0.04
SORL1-206ENST00000527934 RGL3Q3MIN7 710 aa15.3■□□□□ 0.04
SORL1-206ENST00000527934 SHANK2Q9UPX8 1470 aa15.28■□□□□ 0.04
SORL1-206ENST00000527934 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
SORL1-206ENST00000527934 CCER2I3L3R5 266 aa15.27■□□□□ 0.04
SORL1-206ENST00000527934 AFAP1Q8N556 730 aa15.27■□□□□ 0.04
SORL1-206ENST00000527934 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
SORL1-206ENST00000527934 PREX2Q70Z35 1606 aa15.27■□□□□ 0.03
SORL1-206ENST00000527934 CCDC184Q52MB2 194 aa15.27■□□□□ 0.03
SORL1-206ENST00000527934 EFCAB2Q5VUJ9 269 aa15.26■□□□□ 0.03
SORL1-206ENST00000527934 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
SORL1-206ENST00000527934 RSPH4AQ5TD94 716 aa15.26■□□□□ 0.03
SORL1-206ENST00000527934 ARHGEF12Q9NZN5 1544 aa15.26■□□□□ 0.03
SORL1-206ENST00000527934 CCDC7Q96M83 1385 aa15.25■□□□□ 0.03
SORL1-206ENST00000527934 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
SORL1-206ENST00000527934 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
SORL1-206ENST00000527934 PLEKHH2Q8IVE3 1493 aa15.24■□□□□ 0.03
SORL1-206ENST00000527934 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
SORL1-206ENST00000527934 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
SORL1-206ENST00000527934 PKNOX2Q96KN3 472 aa15.22■□□□□ 0.03
SORL1-206ENST00000527934 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
SORL1-206ENST00000527934 TRAPPC8Q9Y2L5 1435 aa15.22■□□□□ 0.03
SORL1-206ENST00000527934 BCANQ96GW7 911 aa15.22■□□□□ 0.03
SORL1-206ENST00000527934 USP47Q96K76 1375 aa15.21■□□□□ 0.03
SORL1-206ENST00000527934 PLCH2O75038 1416 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms