RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 CDC42BPBQ9Y5S2 1711 aa35.96■■■■□ 3.35
LMNB2-204ENST00000527409 ZMYM4Q5VZL5 1548 aa35.93■■■■□ 3.34
LMNB2-204ENST00000527409 SCAPERQ9BY12 1400 aa35.92■■■■□ 3.34
LMNB2-204ENST00000527409 CDC42BPAQ5VT25 1732 aa35.91■■■■□ 3.34
LMNB2-204ENST00000527409 POGZQ7Z3K3 1410 aa35.9■■■■□ 3.34
LMNB2-204ENST00000527409 ARHGEF40Q8TER5 1519 aa35.88■■■■□ 3.33
LMNB2-204ENST00000527409 MTUS2Q5JR59 1369 aa35.88■■■■□ 3.33
LMNB2-204ENST00000527409 VPS8Q8N3P4 1428 aa35.87■■■■□ 3.33
LMNB2-204ENST00000527409 EHBP1L1Q8N3D4 1523 aa35.85■■■■□ 3.33
LMNB2-204ENST00000527409 MAGI2Q86UL8 1455 aa35.84■■■■□ 3.33
LMNB2-204ENST00000527409 ZFYVE16Q7Z3T8 1539 aa35.8■■■■□ 3.32
LMNB2-204ENST00000527409 ZNF518AQ6AHZ1 1483 aa35.8■■■■□ 3.32
LMNB2-204ENST00000527409 ABCC1P33527 1531 aa35.78■■■■□ 3.32
LMNB2-204ENST00000527409 GPATCH8Q9UKJ3 1502 aaKnown RBP35.77■■■■□ 3.32
LMNB2-204ENST00000527409 TIAM1Q13009 1591 aa35.76■■■■□ 3.32
LMNB2-204ENST00000527409 KDM5CP41229 1560 aa35.74■■■■□ 3.31
LMNB2-204ENST00000527409 ITSN2Q9NZM3 1697 aa35.73■■■■□ 3.31
LMNB2-204ENST00000527409 CCNB3Q8WWL7 1395 aa35.73■■■■□ 3.31
LMNB2-204ENST00000527409 YEATS2Q9ULM3 1422 aa35.72■■■■□ 3.31
LMNB2-204ENST00000527409 SAMD9LQ8IVG5 1584 aa35.68■■■■□ 3.3
LMNB2-204ENST00000527409 BCORL1Q5H9F3 1711 aa35.67■■■■□ 3.3
LMNB2-204ENST00000527409 SUPT6HQ7KZ85 1726 aaKnown RBP35.67■■■■□ 3.3
LMNB2-204ENST00000527409 HECW2Q9P2P5 1572 aa35.66■■■■□ 3.3
LMNB2-204ENST00000527409 ARHGEF12Q9NZN5 1544 aa35.66■■■■□ 3.3
LMNB2-204ENST00000527409 MAP3K1Q13233 1512 aa35.65■■■■□ 3.3
LMNB2-204ENST00000527409 ADAMTSL3P82987 1691 aa35.65■■■■□ 3.3
LMNB2-204ENST00000527409 AFAP1Q8N556 730 aa35.64■■■■□ 3.3
LMNB2-204ENST00000527409 ARID4BQ4LE39 1312 aaPredicted RBP35.63■■■■□ 3.29
LMNB2-204ENST00000527409 CFDP1Q9UEE9 299 aaPredicted RBP35.63■■■■□ 3.29
LMNB2-204ENST00000527409 PLEKHH2Q8IVE3 1493 aa35.61■■■■□ 3.29
LMNB2-204ENST00000527409 TRAPPC8Q9Y2L5 1435 aa35.61■■■■□ 3.29
LMNB2-204ENST00000527409 ZNF777Q9ULD5 760 aaPredicted RBP35.61■■■■□ 3.29
LMNB2-204ENST00000527409 ATP10AO60312 1499 aa35.6■■■■□ 3.29
LMNB2-204ENST00000527409 MLH3Q9UHC1 1453 aa35.6■■■■□ 3.29
LMNB2-204ENST00000527409 SYCP2Q9BX26 1530 aa35.59■■■■□ 3.29
LMNB2-204ENST00000527409 NCOA2Q15596 1464 aa35.59■■■■□ 3.29
LMNB2-204ENST00000527409 LRRC9Q6ZRR7 1453 aa35.59■■■■□ 3.29
LMNB2-204ENST00000527409 SIGLEC1Q9BZZ2 1709 aa35.58■■■■□ 3.29
LMNB2-204ENST00000527409 C9orf84Q5VXU9 1444 aa35.57■■■■□ 3.29
LMNB2-204ENST00000527409 KIAA1107Q9UPP5 1409 aa35.57■■■■□ 3.28
LMNB2-204ENST00000527409 DIP2CQ9Y2E4 1556 aa35.54■■■■□ 3.28
LMNB2-204ENST00000527409 MYT1LQ9UL68 1186 aa35.52■■■■□ 3.28
LMNB2-204ENST00000527409 ABCA6Q8N139 1617 aa35.51■■■■□ 3.28
LMNB2-204ENST00000527409 MADDQ8WXG6 1647 aa35.51■■■■□ 3.28
LMNB2-204ENST00000527409 KIDINS220Q9ULH0 1771 aa35.49■■■■□ 3.27
LMNB2-204ENST00000527409 REREQ9P2R6 1566 aa35.49■■■■□ 3.27
LMNB2-204ENST00000527409 HNRNPMP52272 730 aaKnown RBP eCLIP35.47■■■■□ 3.27
LMNB2-204ENST00000527409 PTPRMP28827 1452 aa35.45■■■■□ 3.27
LMNB2-204ENST00000527409 RIMS1Q86UR5 1692 aaKnown RBP35.42■■■■□ 3.26
LMNB2-204ENST00000527409 APLP2Q06481 763 aa35.41■■■■□ 3.26
LMNB2-204ENST00000527409 KANK4Q5T7N3 995 aaPredicted RBP35.41■■■■□ 3.26
LMNB2-204ENST00000527409 SPAG9O60271 1321 aaKnown RBP35.4■■■■□ 3.26
LMNB2-204ENST00000527409 INO80Q9ULG1 1556 aaPredicted RBP35.39■■■■□ 3.26
LMNB2-204ENST00000527409 ZNF644Q9H582 1327 aaPredicted RBP35.39■■■■□ 3.26
LMNB2-204ENST00000527409 FER1L4A9Z1Z3 1794 aa35.38■■■■□ 3.25
LMNB2-204ENST00000527409 ATP7AQ04656 1500 aa35.38■■■■□ 3.25
LMNB2-204ENST00000527409 MBD5Q9P267 1494 aa35.37■■■■□ 3.25
LMNB2-204ENST00000527409 CAMSAP2Q08AD1 1489 aa35.36■■■■□ 3.25
LMNB2-204ENST00000527409 AGLP35573 1532 aa35.35■■■■□ 3.25
LMNB2-204ENST00000527409 MLECQ14165 292 aa35.34■■■■□ 3.25
LMNB2-204ENST00000527409 MYOM3Q5VTT5 1437 aa35.28■■■■□ 3.24
LMNB2-204ENST00000527409 CCDC141Q6ZP82 1450 aa35.28■■■■□ 3.24
LMNB2-204ENST00000527409 ARHGEF5Q12774 1597 aa35.25■■■■□ 3.23
LMNB2-204ENST00000527409 MIA2Q96PC5 1412 aa35.25■■■■□ 3.23
LMNB2-204ENST00000527409 RSPH4AQ5TD94 716 aa35.25■■■■□ 3.23
LMNB2-204ENST00000527409 RTEL1-TNFRSF6BF6WH68 1400 aa35.24■■■■□ 3.23
LMNB2-204ENST00000527409 ADGBQ8N7X0 1667 aa35.24■■■■□ 3.23
LMNB2-204ENST00000527409 PLXNC1O60486 1568 aa35.21■■■■□ 3.23
LMNB2-204ENST00000527409 A2MP01023 1474 aa35.2■■■■□ 3.23
LMNB2-204ENST00000527409 TSPY4P0CV99 314 aa35.08■■■■□ 3.21
LMNB2-204ENST00000527409 TSPY10P0CW01 314 aa35.08■■■■□ 3.21
LMNB2-204ENST00000527409 MAST1Q9Y2H9 1570 aa35.08■■■■□ 3.21
LMNB2-204ENST00000527409 PTPN23Q9H3S7 1636 aa35.07■■■■□ 3.21
LMNB2-204ENST00000527409 ESF1Q9H501 851 aaKnown RBP35.07■■■■□ 3.2
LMNB2-204ENST00000527409 CNTLNQ9NXG0 1405 aa35.06■■■■□ 3.2
LMNB2-204ENST00000527409 PLPPR3Q6T4P5 718 aa35.06■■■■□ 3.2
LMNB2-204ENST00000527409 DHX29Q7Z478 1369 aaKnown RBP35.04■■■■□ 3.2
LMNB2-204ENST00000527409 FGD6Q6ZV73 1430 aa35.04■■■■□ 3.2
LMNB2-204ENST00000527409 C3P01024 1663 aa35.03■■■■□ 3.2
LMNB2-204ENST00000527409 LMTK3Q96Q04 1460 aa35.03■■■■□ 3.2
LMNB2-204ENST00000527409 MROH2AA6NES4 1674 aa35.01■■■■□ 3.2
LMNB2-204ENST00000527409 TCOF1Q13428 1488 aaKnown RBP34.99■■■■□ 3.19
LMNB2-204ENST00000527409 CROCC2H7BZ55 1655 aa34.98■■■■□ 3.19
LMNB2-204ENST00000527409 CEBPAP49715 358 aaPredicted RBP34.97■■■■□ 3.19
LMNB2-204ENST00000527409 PREX1Q8TCU6 1659 aa34.97■■■■□ 3.19
LMNB2-204ENST00000527409 CLTCQ00610 1675 aaKnown RBP34.94■■■■□ 3.18
LMNB2-204ENST00000527409 SETD1BQ9UPS6 1966 aaKnown RBP34.94■■■■□ 3.18
LMNB2-204ENST00000527409 SHANK2Q9UPX8 1470 aa34.93■■■■□ 3.18
LMNB2-204ENST00000527409 GGT6Q6P531 493 aa34.93■■■■□ 3.18
LMNB2-204ENST00000527409 PPP6R1Q9UPN7 881 aa34.93■■■■□ 3.18
LMNB2-204ENST00000527409 DNMT1P26358 1616 aaKnown RBP34.92■■■■□ 3.18
LMNB2-204ENST00000527409 ABCC5O15440 1437 aa34.89■■■■□ 3.18
LMNB2-204ENST00000527409 DAPK1P53355 1430 aa34.87■■■■□ 3.17
LMNB2-204ENST00000527409 FAM135AQ9P2D6 1515 aa34.86■■■■□ 3.17
LMNB2-204ENST00000527409 KIF3BO15066 747 aa34.86■■■■□ 3.17
LMNB2-204ENST00000527409 EIF2AK4Q9P2K8 1649 aaKnown RBP34.85■■■■□ 3.17
LMNB2-204ENST00000527409 ZMYM3Q14202 1370 aa34.85■■■■□ 3.17
LMNB2-204ENST00000527409 UHRF1BP1Q6BDS2 1440 aa34.82■■■■□ 3.17
LMNB2-204ENST00000527409 NPATQ14207 1427 aa34.81■■■■□ 3.16
LMNB2-204ENST00000527409 DUOX2Q9NRD8 1548 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms