RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CCDC146Q8IYE0 955 aa9.12□□□□□ -0.95
TGFBR3-207ENST00000525962 NBPF8Q3BBV2 869 aa9.12□□□□□ -0.95
TGFBR3-207ENST00000525962 FHAD1B1AJZ9 1412 aa9.11□□□□□ -0.95
TGFBR3-207ENST00000525962 KIF7Q2M1P5 1343 aa9.11□□□□□ -0.95
TGFBR3-207ENST00000525962 UPF2Q9HAU5 1272 aaKnown RBP9.11□□□□□ -0.95
TGFBR3-207ENST00000525962 ATAD2BQ9ULI0 1458 aa9.1□□□□□ -0.95
TGFBR3-207ENST00000525962 IGF1RP08069 1367 aa9.1□□□□□ -0.95
TGFBR3-207ENST00000525962 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.1□□□□□ -0.95
TGFBR3-207ENST00000525962 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
TGFBR3-207ENST00000525962 PPM1GO15355 546 aaPredicted RBP9.09□□□□□ -0.95
TGFBR3-207ENST00000525962 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
TGFBR3-207ENST00000525962 ZBED9Q6R2W3 1325 aa9.09□□□□□ -0.95
TGFBR3-207ENST00000525962 CRBNQ96SW2 442 aa9.09□□□□□ -0.95
TGFBR3-207ENST00000525962 KNSTRNQ9Y448 316 aa9.08□□□□□ -0.96
TGFBR3-207ENST00000525962 CCDC18Q5T9S5 1454 aa9.08□□□□□ -0.96
TGFBR3-207ENST00000525962 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
TGFBR3-207ENST00000525962 ZBTB7CA1YPR0 619 aa9.07□□□□□ -0.96
TGFBR3-207ENST00000525962 DDRGK1Q96HY6 314 aa9.07□□□□□ -0.96
TGFBR3-207ENST00000525962 DNAJC5BQ9UF47 199 aa9.07□□□□□ -0.96
TGFBR3-207ENST00000525962 RRBP1Q9P2E9 1410 aaKnown RBP9.07□□□□□ -0.96
TGFBR3-207ENST00000525962 BCL2L13Q9BXK5 485 aa9.06□□□□□ -0.96
TGFBR3-207ENST00000525962 FMN1Q68DA7 1419 aa9.06□□□□□ -0.96
TGFBR3-207ENST00000525962 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
TGFBR3-207ENST00000525962 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
TGFBR3-207ENST00000525962 ARID3AQ99856 593 aa9.05□□□□□ -0.96
TGFBR3-207ENST00000525962 CCDC7Q96M83 1385 aa9.05□□□□□ -0.96
TGFBR3-207ENST00000525962 PLEKHD1A6NEE1 506 aa9.05□□□□□ -0.96
TGFBR3-207ENST00000525962 RRP7AQ9Y3A4 280 aaKnown RBP9.04□□□□□ -0.96
TGFBR3-207ENST00000525962 HNRNPMP52272 730 aaKnown RBP eCLIP9.04□□□□□ -0.961e-6■■■□□ 17.7
TGFBR3-207ENST00000525962 SAFB2Q14151 953 aaKnown RBP eCLIP9.04□□□□□ -0.96
TGFBR3-207ENST00000525962 TCERG1O14776 1098 aaKnown RBP9.04□□□□□ -0.96
TGFBR3-207ENST00000525962 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
TGFBR3-207ENST00000525962 NUP155O75694 1391 aa9.03□□□□□ -0.96
TGFBR3-207ENST00000525962 LRRC9Q6ZRR7 1453 aa9.03□□□□□ -0.96
TGFBR3-207ENST00000525962 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
TGFBR3-207ENST00000525962 THOC2Q8NI27 1593 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-207ENST00000525962 PLEKHG5O94827 1062 aa9.02□□□□□ -0.97
TGFBR3-207ENST00000525962 PLPPR3Q6T4P5 718 aa9.02□□□□□ -0.97
TGFBR3-207ENST00000525962 PANK3Q9H999 370 aa9.02□□□□□ -0.97
TGFBR3-207ENST00000525962 FOXD4L1Q9NU39 408 aa9.02□□□□□ -0.97
TGFBR3-207ENST00000525962 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-207ENST00000525962 USP47Q96K76 1375 aa9.01□□□□□ -0.97
TGFBR3-207ENST00000525962 ANP32BQ92688 251 aaKnown RBP9□□□□□ -0.97
TGFBR3-207ENST00000525962 ROCK2O75116 1388 aaKnown RBP9□□□□□ -0.97
TGFBR3-207ENST00000525962 FGD6Q6ZV73 1430 aa9□□□□□ -0.97
TGFBR3-207ENST00000525962 KIF21AQ7Z4S6 1674 aa8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 BECN1Q14457 450 aa8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 PRXQ9BXM0 1461 aa8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 GSE1Q14687 1217 aa8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 NFKBIBQ15653 356 aa8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 GLIPR1L2Q4G1C9 344 aa8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 FRAT2O75474 233 aaPredicted RBP8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 NUTM2DQ5VT03 806 aaPredicted RBP8.99□□□□□ -0.97
TGFBR3-207ENST00000525962 CNTLNQ9NXG0 1405 aa8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 KTN1Q86UP2 1357 aaKnown RBP8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 U2SURPO15042 1029 aaKnown RBP8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 C20orf194Q5TEA3 1177 aa8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 NLRP13Q86W25 1043 aa8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 TRIM44Q96DX7 344 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 NBPF1Q3BBV0 1214 aa8.98□□□□□ -0.97
TGFBR3-207ENST00000525962 FTSJ3Q8IY81 847 aaKnown RBP8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 CFTRP13569 1480 aa8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 UACAQ9BZF9 1416 aa8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 APBB1O00213 710 aa8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 APAF1O14727 1248 aa8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 TMF1P82094 1093 aa8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 PNISRQ8TF01 805 aaKnown RBP8.97□□□□□ -0.97
TGFBR3-207ENST00000525962 MAPKBP1O60336 1514 aa8.96□□□□□ -0.98
TGFBR3-207ENST00000525962 MFAP1P55081 439 aaKnown RBP8.96□□□□□ -0.98
TGFBR3-207ENST00000525962 ADAMTS8Q9UP79 889 aa8.95□□□□□ -0.98
TGFBR3-207ENST00000525962 MYBBP1AQ9BQG0 1328 aaKnown RBP8.95□□□□□ -0.98
TGFBR3-207ENST00000525962 RALBP1Q15311 655 aa8.95□□□□□ -0.98
TGFBR3-207ENST00000525962 FGD5Q6ZNL6 1462 aa8.95□□□□□ -0.98
TGFBR3-207ENST00000525962 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
TGFBR3-207ENST00000525962 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
TGFBR3-207ENST00000525962 GOLGA2Q08379 1002 aa8.94□□□□□ -0.98
TGFBR3-207ENST00000525962 PANK1Q8TE04 598 aa8.93□□□□□ -0.98
TGFBR3-207ENST00000525962 BACH2Q9BYV9 841 aa8.93□□□□□ -0.98
TGFBR3-207ENST00000525962 BIVM-ERCC5R4GMW8 1640 aa8.93□□□□□ -0.98
TGFBR3-207ENST00000525962 AQRO60306 1485 aaKnown RBP eCLIP8.92□□□□□ -0.985e-7■■■□□ 17.1
TGFBR3-207ENST00000525962 BCAR3O75815 825 aa8.92□□□□□ -0.98
TGFBR3-207ENST00000525962 PTPRKQ15262 1439 aa8.92□□□□□ -0.98
TGFBR3-207ENST00000525962 PDS5BQ9NTI5 1447 aa8.92□□□□□ -0.98
TGFBR3-207ENST00000525962 CUX1P39880 1505 aa8.92□□□□□ -0.98
TGFBR3-207ENST00000525962 SOX12O15370 315 aa8.91□□□□□ -0.98
TGFBR3-207ENST00000525962 FAM161AQ3B820 660 aa8.91□□□□□ -0.98
TGFBR3-207ENST00000525962 NCOA2Q15596 1464 aa8.91□□□□□ -0.98
TGFBR3-207ENST00000525962 STK26Q9P289 416 aa8.91□□□□□ -0.98
TGFBR3-207ENST00000525962 KIF15Q9NS87 1388 aa8.91□□□□□ -0.98
TGFBR3-207ENST00000525962 ELL2O00472 640 aaPredicted RBP8.9□□□□□ -0.98
TGFBR3-207ENST00000525962 NAIPQ13075 1403 aa8.9□□□□□ -0.98
TGFBR3-207ENST00000525962 MYOM3Q5VTT5 1437 aa8.9□□□□□ -0.98
TGFBR3-207ENST00000525962 U2AF1L5P0DN76 240 aaPredicted RBP8.9□□□□□ -0.99
TGFBR3-207ENST00000525962 U2AF1Q01081 240 aaKnown RBP eCLIP8.9□□□□□ -0.99
TGFBR3-207ENST00000525962 MORC1Q86VD1 984 aa8.9□□□□□ -0.99
TGFBR3-207ENST00000525962 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
TGFBR3-207ENST00000525962 FOXD4L5Q5VV16 416 aaPredicted RBP8.89□□□□□ -0.99
TGFBR3-207ENST00000525962 FOXD4L4Q8WXT5 416 aaPredicted RBP8.89□□□□□ -0.99
TGFBR3-207ENST00000525962 ITPRIPQ8IWB1 547 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms