RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 MADDQ8WXG6 1647 aa22.16■■□□□ 1.14
CNKSR1-210ENST00000525687 PCF11O94913 1555 aaKnown RBP22.16■■□□□ 1.14
CNKSR1-210ENST00000525687 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
CNKSR1-210ENST00000525687 CLIP1P30622 1438 aa22.15■■□□□ 1.14
CNKSR1-210ENST00000525687 POGZQ7Z3K3 1410 aa22.14■■□□□ 1.14
CNKSR1-210ENST00000525687 CASKIN1Q8WXD9 1431 aa22.13■■□□□ 1.13
CNKSR1-210ENST00000525687 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
CNKSR1-210ENST00000525687 SIGLEC1Q9BZZ2 1709 aa22.11■■□□□ 1.13
CNKSR1-210ENST00000525687 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
CNKSR1-210ENST00000525687 RIMS1Q86UR5 1692 aaKnown RBP22.09■■□□□ 1.13
CNKSR1-210ENST00000525687 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
CNKSR1-210ENST00000525687 MLECQ14165 292 aa22.07■■□□□ 1.12
CNKSR1-210ENST00000525687 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
CNKSR1-210ENST00000525687 ILDR1Q86SU0 546 aaPredicted RBP22.04■■□□□ 1.12
CNKSR1-210ENST00000525687 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
CNKSR1-210ENST00000525687 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
CNKSR1-210ENST00000525687 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
CNKSR1-210ENST00000525687 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
CNKSR1-210ENST00000525687 ATP10AO60312 1499 aa22.03■■□□□ 1.12
CNKSR1-210ENST00000525687 C9orf84Q5VXU9 1444 aa22.01■■□□□ 1.11
CNKSR1-210ENST00000525687 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
CNKSR1-210ENST00000525687 PREX2Q70Z35 1606 aa22■■□□□ 1.11
CNKSR1-210ENST00000525687 KDM5CP41229 1560 aa21.99■■□□□ 1.11
CNKSR1-210ENST00000525687 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
CNKSR1-210ENST00000525687 FER1L4A9Z1Z3 1794 aa21.96■■□□□ 1.11
CNKSR1-210ENST00000525687 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
CNKSR1-210ENST00000525687 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
CNKSR1-210ENST00000525687 ABCC1P33527 1531 aa21.95■■□□□ 1.1
CNKSR1-210ENST00000525687 CDC42BPAQ5VT25 1732 aa21.94■■□□□ 1.1
CNKSR1-210ENST00000525687 DIP2CQ9Y2E4 1556 aa21.92■■□□□ 1.1
CNKSR1-210ENST00000525687 ZNF777Q9ULD5 760 aaPredicted RBP21.92■■□□□ 1.1
CNKSR1-210ENST00000525687 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
CNKSR1-210ENST00000525687 HSPA2P54652 639 aa21.91■■□□□ 1.1
CNKSR1-210ENST00000525687 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
CNKSR1-210ENST00000525687 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
CNKSR1-210ENST00000525687 CEBPAP49715 358 aaPredicted RBP21.88■■□□□ 1.09
CNKSR1-210ENST00000525687 GPATCH8Q9UKJ3 1502 aaKnown RBP21.88■■□□□ 1.09
CNKSR1-210ENST00000525687 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
CNKSR1-210ENST00000525687 MTUS2Q5JR59 1369 aa21.86■■□□□ 1.09
CNKSR1-210ENST00000525687 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
CNKSR1-210ENST00000525687 REREQ9P2R6 1566 aa21.84■■□□□ 1.09
CNKSR1-210ENST00000525687 HNRNPMP52272 730 aaKnown RBP eCLIP21.84■■□□□ 1.09
CNKSR1-210ENST00000525687 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
CNKSR1-210ENST00000525687 KIDINS220Q9ULH0 1771 aa21.84■■□□□ 1.09
CNKSR1-210ENST00000525687 CFDP1Q9UEE9 299 aaPredicted RBP21.83■■□□□ 1.09
CNKSR1-210ENST00000525687 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.08
CNKSR1-210ENST00000525687 AGLP35573 1532 aa21.79■■□□□ 1.08
CNKSR1-210ENST00000525687 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
CNKSR1-210ENST00000525687 ESF1Q9H501 851 aaKnown RBP21.76■■□□□ 1.07
CNKSR1-210ENST00000525687 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
CNKSR1-210ENST00000525687 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
CNKSR1-210ENST00000525687 KIAA1107Q9UPP5 1409 aa21.75■■□□□ 1.07
CNKSR1-210ENST00000525687 PLEKHH2Q8IVE3 1493 aa21.75■■□□□ 1.07
CNKSR1-210ENST00000525687 ZNF644Q9H582 1327 aaPredicted RBP21.74■■□□□ 1.07
CNKSR1-210ENST00000525687 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
CNKSR1-210ENST00000525687 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
CNKSR1-210ENST00000525687 ATP7AQ04656 1500 aa21.72■■□□□ 1.07
CNKSR1-210ENST00000525687 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
CNKSR1-210ENST00000525687 C3P01024 1663 aa21.72■■□□□ 1.07
CNKSR1-210ENST00000525687 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
CNKSR1-210ENST00000525687 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
CNKSR1-210ENST00000525687 INO80Q9ULG1 1556 aaPredicted RBP21.69■■□□□ 1.06
CNKSR1-210ENST00000525687 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
CNKSR1-210ENST00000525687 A2MP01023 1474 aa21.66■■□□□ 1.06
CNKSR1-210ENST00000525687 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
CNKSR1-210ENST00000525687 MBD5Q9P267 1494 aa21.64■■□□□ 1.06
CNKSR1-210ENST00000525687 NCOA2Q15596 1464 aa21.64■■□□□ 1.05
CNKSR1-210ENST00000525687 PLXNC1O60486 1568 aa21.63■■□□□ 1.05
CNKSR1-210ENST00000525687 GGT6Q6P531 493 aa21.61■■□□□ 1.05
CNKSR1-210ENST00000525687 VPS8Q8N3P4 1428 aa21.61■■□□□ 1.05
CNKSR1-210ENST00000525687 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
CNKSR1-210ENST00000525687 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
CNKSR1-210ENST00000525687 MROH2AA6NES4 1674 aa21.59■■□□□ 1.05
CNKSR1-210ENST00000525687 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.05
CNKSR1-210ENST00000525687 ADGBQ8N7X0 1667 aa21.58■■□□□ 1.05
CNKSR1-210ENST00000525687 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.04
CNKSR1-210ENST00000525687 CERKQ8TCT0 537 aa21.57■■□□□ 1.04
CNKSR1-210ENST00000525687 RTEL1-TNFRSF6BF6WH68 1400 aa21.56■■□□□ 1.04
CNKSR1-210ENST00000525687 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
CNKSR1-210ENST00000525687 CCDC141Q6ZP82 1450 aa21.55■■□□□ 1.04
CNKSR1-210ENST00000525687 NPATQ14207 1427 aa21.55■■□□□ 1.04
CNKSR1-210ENST00000525687 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
CNKSR1-210ENST00000525687 DHX29Q7Z478 1369 aaKnown RBP21.52■■□□□ 1.04
CNKSR1-210ENST00000525687 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
CNKSR1-210ENST00000525687 RSPH4AQ5TD94 716 aa21.5■■□□□ 1.03
CNKSR1-210ENST00000525687 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
CNKSR1-210ENST00000525687 KIF3BO15066 747 aa21.49■■□□□ 1.03
CNKSR1-210ENST00000525687 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
CNKSR1-210ENST00000525687 NCOA1Q15788 1441 aa21.48■■□□□ 1.03
CNKSR1-210ENST00000525687 PTPRTO14522 1441 aa21.47■■□□□ 1.03
CNKSR1-210ENST00000525687 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
CNKSR1-210ENST00000525687 ARHGEF5Q12774 1597 aa21.46■■□□□ 1.03
CNKSR1-210ENST00000525687 TSPY4P0CV99 314 aa21.46■■□□□ 1.03
CNKSR1-210ENST00000525687 TSPY10P0CW01 314 aa21.46■■□□□ 1.03
CNKSR1-210ENST00000525687 MYO3AQ8NEV4 1616 aa21.45■■□□□ 1.02
CNKSR1-210ENST00000525687 MAP3K1Q13233 1512 aa21.45■■□□□ 1.02
CNKSR1-210ENST00000525687 NCKAP5LQ9HCH0 1330 aa21.42■■□□□ 1.02
CNKSR1-210ENST00000525687 CEP170BQ9Y4F5 1589 aaPredicted RBP21.41■■□□□ 1.02
CNKSR1-210ENST00000525687 ZNF142P52746 1687 aaPredicted RBP21.4■■□□□ 1.02
CNKSR1-210ENST00000525687 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms