RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
CTSB-209ENST00000525315 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
CTSB-209ENST00000525315 FRMPD1Q5SYB0 1578 aa20.48■□□□□ 0.87
CTSB-209ENST00000525315 ARHGAP5Q13017 1502 aa20.48■□□□□ 0.87
CTSB-209ENST00000525315 GPATCH8Q9UKJ3 1502 aaKnown RBP20.47■□□□□ 0.87
CTSB-209ENST00000525315 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
CTSB-209ENST00000525315 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
CTSB-209ENST00000525315 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
CTSB-209ENST00000525315 SUPT6HQ7KZ85 1726 aaKnown RBP20.42■□□□□ 0.86
CTSB-209ENST00000525315 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
CTSB-209ENST00000525315 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
CTSB-209ENST00000525315 ZMYM4Q5VZL5 1548 aa20.39■□□□□ 0.85
CTSB-209ENST00000525315 POGZQ7Z3K3 1410 aa20.39■□□□□ 0.85
CTSB-209ENST00000525315 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
CTSB-209ENST00000525315 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
CTSB-209ENST00000525315 ABCC1P33527 1531 aa20.37■□□□□ 0.85
CTSB-209ENST00000525315 ARHGEF12Q9NZN5 1544 aa20.37■□□□□ 0.85
CTSB-209ENST00000525315 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
CTSB-209ENST00000525315 ITSN2Q9NZM3 1697 aa20.36■□□□□ 0.85
CTSB-209ENST00000525315 KDM4FA0A1W2PPD8 638 aa20.36■□□□□ 0.85
CTSB-209ENST00000525315 APLP2Q06481 763 aa20.36■□□□□ 0.85
CTSB-209ENST00000525315 AFAP1Q8N556 730 aa20.36■□□□□ 0.85
CTSB-209ENST00000525315 SAMD9LQ8IVG5 1584 aa20.36■□□□□ 0.85
CTSB-209ENST00000525315 ZNF777Q9ULD5 760 aaPredicted RBP20.35■□□□□ 0.85
CTSB-209ENST00000525315 ZNF518AQ6AHZ1 1483 aa20.35■□□□□ 0.85
CTSB-209ENST00000525315 KDM5CP41229 1560 aa20.33■□□□□ 0.84
CTSB-209ENST00000525315 KIAA1107Q9UPP5 1409 aa20.32■□□□□ 0.84
CTSB-209ENST00000525315 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
CTSB-209ENST00000525315 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
CTSB-209ENST00000525315 ARHGEF40Q8TER5 1519 aa20.31■□□□□ 0.84
CTSB-209ENST00000525315 HNRNPMP52272 730 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTSB-209ENST00000525315 ZFYVE16Q7Z3T8 1539 aa20.3■□□□□ 0.84
CTSB-209ENST00000525315 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
CTSB-209ENST00000525315 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
CTSB-209ENST00000525315 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
CTSB-209ENST00000525315 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
CTSB-209ENST00000525315 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
CTSB-209ENST00000525315 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
CTSB-209ENST00000525315 ATP10AO60312 1499 aa20.25■□□□□ 0.83
CTSB-209ENST00000525315 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
CTSB-209ENST00000525315 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
CTSB-209ENST00000525315 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
CTSB-209ENST00000525315 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
CTSB-209ENST00000525315 MIA2Q96PC5 1412 aa20.21■□□□□ 0.83
CTSB-209ENST00000525315 MYT1LQ9UL68 1186 aa20.21■□□□□ 0.83
CTSB-209ENST00000525315 BCORL1Q5H9F3 1711 aa20.21■□□□□ 0.83
CTSB-209ENST00000525315 CAMSAP2Q08AD1 1489 aa20.2■□□□□ 0.82
CTSB-209ENST00000525315 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
CTSB-209ENST00000525315 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
CTSB-209ENST00000525315 ARID4BQ4LE39 1312 aaPredicted RBP20.2■□□□□ 0.82
CTSB-209ENST00000525315 DIP2CQ9Y2E4 1556 aa20.2■□□□□ 0.82
CTSB-209ENST00000525315 ADAMTSL3P82987 1691 aa20.19■□□□□ 0.82
CTSB-209ENST00000525315 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
CTSB-209ENST00000525315 ABCA6Q8N139 1617 aa20.18■□□□□ 0.82
CTSB-209ENST00000525315 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
CTSB-209ENST00000525315 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
CTSB-209ENST00000525315 INO80Q9ULG1 1556 aaPredicted RBP20.15■□□□□ 0.82
CTSB-209ENST00000525315 ATP7AQ04656 1500 aa20.14■□□□□ 0.81
CTSB-209ENST00000525315 RTEL1-TNFRSF6BF6WH68 1400 aa20.14■□□□□ 0.81
CTSB-209ENST00000525315 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
CTSB-209ENST00000525315 AGLP35573 1532 aa20.11■□□□□ 0.81
CTSB-209ENST00000525315 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
CTSB-209ENST00000525315 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
CTSB-209ENST00000525315 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
CTSB-209ENST00000525315 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
CTSB-209ENST00000525315 ADGBQ8N7X0 1667 aa20.09■□□□□ 0.81
CTSB-209ENST00000525315 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
CTSB-209ENST00000525315 TCOF1Q13428 1488 aaKnown RBP20.07■□□□□ 0.8
CTSB-209ENST00000525315 MLECQ14165 292 aa20.07■□□□□ 0.8
CTSB-209ENST00000525315 A2MP01023 1474 aa20.05■□□□□ 0.8
CTSB-209ENST00000525315 PTPRMP28827 1452 aa20.05■□□□□ 0.8
CTSB-209ENST00000525315 MAST1Q9Y2H9 1570 aa20.04■□□□□ 0.8
CTSB-209ENST00000525315 RIMS1Q86UR5 1692 aaKnown RBP20.04■□□□□ 0.8
CTSB-209ENST00000525315 FER1L4A9Z1Z3 1794 aa20.04■□□□□ 0.8
CTSB-209ENST00000525315 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
CTSB-209ENST00000525315 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
CTSB-209ENST00000525315 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
CTSB-209ENST00000525315 ABCC5O15440 1437 aa20.01■□□□□ 0.79
CTSB-209ENST00000525315 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
CTSB-209ENST00000525315 CROCC2H7BZ55 1655 aa19.99■□□□□ 0.79
CTSB-209ENST00000525315 DAPK1P53355 1430 aa19.97■□□□□ 0.79
CTSB-209ENST00000525315 SHANK2Q9UPX8 1470 aa19.96■□□□□ 0.79
CTSB-209ENST00000525315 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
CTSB-209ENST00000525315 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
CTSB-209ENST00000525315 KIF3BO15066 747 aa19.91■□□□□ 0.78
CTSB-209ENST00000525315 GGT6Q6P531 493 aa19.91■□□□□ 0.78
CTSB-209ENST00000525315 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
CTSB-209ENST00000525315 SETD1BQ9UPS6 1966 aaKnown RBP19.91■□□□□ 0.78
CTSB-209ENST00000525315 CNTLNQ9NXG0 1405 aa19.9■□□□□ 0.78
CTSB-209ENST00000525315 C3P01024 1663 aa19.89■□□□□ 0.77
CTSB-209ENST00000525315 DUOX2Q9NRD8 1548 aa19.89■□□□□ 0.77
CTSB-209ENST00000525315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.89■□□□□ 0.775e-11■□□□□ 10.7
CTSB-209ENST00000525315 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
CTSB-209ENST00000525315 CEBPAP49715 358 aaPredicted RBP19.88■□□□□ 0.77
CTSB-209ENST00000525315 RRP7BPQ9NSQ0 103 aa19.88■□□□□ 0.77
CTSB-209ENST00000525315 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
CTSB-209ENST00000525315 NCOA1Q15788 1441 aa19.87■□□□□ 0.77
CTSB-209ENST00000525315 CLTCQ00610 1675 aaKnown RBP19.87■□□□□ 0.77
CTSB-209ENST00000525315 EIF2AK4Q9P2K8 1649 aaKnown RBP19.87■□□□□ 0.77
CTSB-209ENST00000525315 ANKRD30AQ9BXX3 1397 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms