RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
CLNS1A-202ENST00000525064 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.7
CLNS1A-202ENST00000525064 POGZQ7Z3K3 1410 aa19.39■□□□□ 0.69
CLNS1A-202ENST00000525064 CASKIN1Q8WXD9 1431 aa19.38■□□□□ 0.69
CLNS1A-202ENST00000525064 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
CLNS1A-202ENST00000525064 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
CLNS1A-202ENST00000525064 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
CLNS1A-202ENST00000525064 PREX2Q70Z35 1606 aa19.35■□□□□ 0.69
CLNS1A-202ENST00000525064 ARHGAP5Q13017 1502 aa19.35■□□□□ 0.69
CLNS1A-202ENST00000525064 CCDC18Q5T9S5 1454 aa19.35■□□□□ 0.69
CLNS1A-202ENST00000525064 CLIP1P30622 1438 aa19.34■□□□□ 0.69
CLNS1A-202ENST00000525064 CDC42BPAQ5VT25 1732 aa19.33■□□□□ 0.68
CLNS1A-202ENST00000525064 MAGI2Q86UL8 1455 aa19.33■□□□□ 0.68
CLNS1A-202ENST00000525064 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.68
CLNS1A-202ENST00000525064 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
CLNS1A-202ENST00000525064 EFCAB2Q5VUJ9 269 aa19.3■□□□□ 0.68
CLNS1A-202ENST00000525064 KDM5CP41229 1560 aa19.3■□□□□ 0.68
CLNS1A-202ENST00000525064 ITSN2Q9NZM3 1697 aa19.29■□□□□ 0.68
CLNS1A-202ENST00000525064 ABCC1P33527 1531 aa19.27■□□□□ 0.68
CLNS1A-202ENST00000525064 ZNF518AQ6AHZ1 1483 aa19.27■□□□□ 0.67
CLNS1A-202ENST00000525064 ARHGEF12Q9NZN5 1544 aa19.25■□□□□ 0.67
CLNS1A-202ENST00000525064 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
CLNS1A-202ENST00000525064 DIP2CQ9Y2E4 1556 aa19.25■□□□□ 0.67
CLNS1A-202ENST00000525064 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
CLNS1A-202ENST00000525064 ATP10AO60312 1499 aa19.24■□□□□ 0.67
CLNS1A-202ENST00000525064 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
CLNS1A-202ENST00000525064 MLECQ14165 292 aa19.22■□□□□ 0.67
CLNS1A-202ENST00000525064 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
CLNS1A-202ENST00000525064 TRAPPC8Q9Y2L5 1435 aa19.21■□□□□ 0.67
CLNS1A-202ENST00000525064 SAMD9LQ8IVG5 1584 aa19.2■□□□□ 0.66
CLNS1A-202ENST00000525064 KIDINS220Q9ULH0 1771 aa19.19■□□□□ 0.66
CLNS1A-202ENST00000525064 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
CLNS1A-202ENST00000525064 ILDR1Q86SU0 546 aaPredicted RBP19.17■□□□□ 0.66
CLNS1A-202ENST00000525064 REREQ9P2R6 1566 aa19.17■□□□□ 0.66
CLNS1A-202ENST00000525064 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
CLNS1A-202ENST00000525064 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
CLNS1A-202ENST00000525064 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
CLNS1A-202ENST00000525064 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
CLNS1A-202ENST00000525064 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
CLNS1A-202ENST00000525064 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
CLNS1A-202ENST00000525064 PREX1Q8TCU6 1659 aa19.1■□□□□ 0.65
CLNS1A-202ENST00000525064 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
CLNS1A-202ENST00000525064 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
CLNS1A-202ENST00000525064 AGLP35573 1532 aa19.09■□□□□ 0.65
CLNS1A-202ENST00000525064 MTUS2Q5JR59 1369 aa19.08■□□□□ 0.65
CLNS1A-202ENST00000525064 C3P01024 1663 aa19.08■□□□□ 0.65
CLNS1A-202ENST00000525064 HSPA2P54652 639 aa19.08■□□□□ 0.64
CLNS1A-202ENST00000525064 INO80Q9ULG1 1556 aaPredicted RBP19.07■□□□□ 0.64
CLNS1A-202ENST00000525064 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
CLNS1A-202ENST00000525064 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
CLNS1A-202ENST00000525064 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
CLNS1A-202ENST00000525064 HNRNPMP52272 730 aaKnown RBP eCLIP19.05■□□□□ 0.64
CLNS1A-202ENST00000525064 ATP7AQ04656 1500 aa19.04■□□□□ 0.64
CLNS1A-202ENST00000525064 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
CLNS1A-202ENST00000525064 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.64
CLNS1A-202ENST00000525064 SETD1BQ9UPS6 1966 aaKnown RBP19.01■□□□□ 0.63
CLNS1A-202ENST00000525064 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
CLNS1A-202ENST00000525064 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
CLNS1A-202ENST00000525064 LOC105371045A0A1W2PR82 267 aa19■□□□□ 0.63
CLNS1A-202ENST00000525064 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
CLNS1A-202ENST00000525064 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
CLNS1A-202ENST00000525064 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
CLNS1A-202ENST00000525064 MROH2AA6NES4 1674 aa18.97■□□□□ 0.63
CLNS1A-202ENST00000525064 ADGBQ8N7X0 1667 aa18.97■□□□□ 0.63
CLNS1A-202ENST00000525064 NCOA2Q15596 1464 aa18.97■□□□□ 0.63
CLNS1A-202ENST00000525064 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
CLNS1A-202ENST00000525064 CLTCQ00610 1675 aaKnown RBP18.95■□□□□ 0.62
CLNS1A-202ENST00000525064 A2MP01023 1474 aa18.95■□□□□ 0.62
CLNS1A-202ENST00000525064 UHRF1BP1Q6BDS2 1440 aa18.93■□□□□ 0.62
CLNS1A-202ENST00000525064 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
CLNS1A-202ENST00000525064 CAMSAP2Q08AD1 1489 aa18.91■□□□□ 0.62
CLNS1A-202ENST00000525064 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
CLNS1A-202ENST00000525064 FBXO41Q8TF61 875 aa18.89■□□□□ 0.61
CLNS1A-202ENST00000525064 ESF1Q9H501 851 aaKnown RBP18.88■□□□□ 0.61
CLNS1A-202ENST00000525064 LRRC9Q6ZRR7 1453 aa18.88■□□□□ 0.61
CLNS1A-202ENST00000525064 CCDC141Q6ZP82 1450 aa18.87■□□□□ 0.61
CLNS1A-202ENST00000525064 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
CLNS1A-202ENST00000525064 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
CLNS1A-202ENST00000525064 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
CLNS1A-202ENST00000525064 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
CLNS1A-202ENST00000525064 ZNF142P52746 1687 aaPredicted RBP18.83■□□□□ 0.61
CLNS1A-202ENST00000525064 NPATQ14207 1427 aa18.83■□□□□ 0.6
CLNS1A-202ENST00000525064 GGT6Q6P531 493 aa18.82■□□□□ 0.6
CLNS1A-202ENST00000525064 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
CLNS1A-202ENST00000525064 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
CLNS1A-202ENST00000525064 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
CLNS1A-202ENST00000525064 DHX29Q7Z478 1369 aaKnown RBP18.8■□□□□ 0.6
CLNS1A-202ENST00000525064 CAMSAP1Q5T5Y3 1602 aa18.79■□□□□ 0.6
CLNS1A-202ENST00000525064 NCOA1Q15788 1441 aa18.79■□□□□ 0.6
CLNS1A-202ENST00000525064 CERKQ8TCT0 537 aa18.77■□□□□ 0.6
CLNS1A-202ENST00000525064 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
CLNS1A-202ENST00000525064 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
CLNS1A-202ENST00000525064 PTPRTO14522 1441 aa18.75■□□□□ 0.59
CLNS1A-202ENST00000525064 KDM5DQ9BY66 1539 aa18.74■□□□□ 0.59
CLNS1A-202ENST00000525064 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
CLNS1A-202ENST00000525064 KIF3BO15066 747 aa18.73■□□□□ 0.59
CLNS1A-202ENST00000525064 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
CLNS1A-202ENST00000525064 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.59
CLNS1A-202ENST00000525064 RSPH4AQ5TD94 716 aa18.71■□□□□ 0.59
CLNS1A-202ENST00000525064 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms