RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ARHGEF40Q8TER5 1519 aa29.81■■■□□ 2.36
CAPN1-203ENST00000525013 ZMYM4Q5VZL5 1548 aa29.8■■■□□ 2.36
CAPN1-203ENST00000525013 POGZQ7Z3K3 1410 aa29.79■■■□□ 2.36
CAPN1-203ENST00000525013 CDC42BPBQ9Y5S2 1711 aa29.77■■■□□ 2.36
CAPN1-203ENST00000525013 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
CAPN1-203ENST00000525013 ZFYVE16Q7Z3T8 1539 aa29.76■■■□□ 2.35
CAPN1-203ENST00000525013 MAGI2Q86UL8 1455 aa29.74■■■□□ 2.35
CAPN1-203ENST00000525013 YEATS2Q9ULM3 1422 aa29.73■■■□□ 2.35
CAPN1-203ENST00000525013 PREX2Q70Z35 1606 aa29.73■■■□□ 2.35
CAPN1-203ENST00000525013 ADAMTSL3P82987 1691 aa29.72■■■□□ 2.35
CAPN1-203ENST00000525013 BCORL1Q5H9F3 1711 aa29.71■■■□□ 2.35
CAPN1-203ENST00000525013 CDC42BPAQ5VT25 1732 aa29.7■■■□□ 2.34
CAPN1-203ENST00000525013 AFAP1Q8N556 730 aa29.67■■■□□ 2.34
CAPN1-203ENST00000525013 ZNF518AQ6AHZ1 1483 aa29.67■■■□□ 2.34
CAPN1-203ENST00000525013 MTUS2Q5JR59 1369 aa29.66■■■□□ 2.34
CAPN1-203ENST00000525013 MYT1LQ9UL68 1186 aa29.66■■■□□ 2.34
CAPN1-203ENST00000525013 MADDQ8WXG6 1647 aa29.63■■■□□ 2.33
CAPN1-203ENST00000525013 ZNF777Q9ULD5 760 aaPredicted RBP29.62■■■□□ 2.33
CAPN1-203ENST00000525013 PTPRMP28827 1452 aa29.61■■■□□ 2.33
CAPN1-203ENST00000525013 SIGLEC1Q9BZZ2 1709 aa29.61■■■□□ 2.33
CAPN1-203ENST00000525013 ATP10AO60312 1499 aa29.61■■■□□ 2.33
CAPN1-203ENST00000525013 ABCC1P33527 1531 aa29.61■■■□□ 2.33
CAPN1-203ENST00000525013 KDM5CP41229 1560 aa29.6■■■□□ 2.33
CAPN1-203ENST00000525013 GPATCH8Q9UKJ3 1502 aaKnown RBP29.59■■■□□ 2.33
CAPN1-203ENST00000525013 MLECQ14165 292 aa29.58■■■□□ 2.33
CAPN1-203ENST00000525013 ITSN2Q9NZM3 1697 aa29.58■■■□□ 2.33
CAPN1-203ENST00000525013 HECW2Q9P2P5 1572 aa29.58■■■□□ 2.33
CAPN1-203ENST00000525013 ARHGEF12Q9NZN5 1544 aa29.57■■■□□ 2.32
CAPN1-203ENST00000525013 CCNB3Q8WWL7 1395 aa29.57■■■□□ 2.32
CAPN1-203ENST00000525013 TRAPPC8Q9Y2L5 1435 aa29.56■■■□□ 2.32
CAPN1-203ENST00000525013 RIMS1Q86UR5 1692 aaKnown RBP29.56■■■□□ 2.32
CAPN1-203ENST00000525013 C9orf84Q5VXU9 1444 aa29.55■■■□□ 2.32
CAPN1-203ENST00000525013 CFDP1Q9UEE9 299 aaPredicted RBP29.55■■■□□ 2.32
CAPN1-203ENST00000525013 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
CAPN1-203ENST00000525013 SAMD9LQ8IVG5 1584 aa29.52■■■□□ 2.32
CAPN1-203ENST00000525013 MLH3Q9UHC1 1453 aa29.49■■■□□ 2.31
CAPN1-203ENST00000525013 PLPPR3Q6T4P5 718 aa29.49■■■□□ 2.31
CAPN1-203ENST00000525013 DIP2CQ9Y2E4 1556 aa29.48■■■□□ 2.31
CAPN1-203ENST00000525013 HNRNPMP52272 730 aaKnown RBP eCLIP29.48■■■□□ 2.31
CAPN1-203ENST00000525013 VPS8Q8N3P4 1428 aa29.47■■■□□ 2.31
CAPN1-203ENST00000525013 SYCP2Q9BX26 1530 aa29.47■■■□□ 2.31
CAPN1-203ENST00000525013 FER1L4A9Z1Z3 1794 aa29.47■■■□□ 2.31
CAPN1-203ENST00000525013 ABCA6Q8N139 1617 aa29.46■■■□□ 2.31
CAPN1-203ENST00000525013 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
CAPN1-203ENST00000525013 PLEKHH2Q8IVE3 1493 aa29.43■■■□□ 2.3
CAPN1-203ENST00000525013 KIDINS220Q9ULH0 1771 aa29.43■■■□□ 2.3
CAPN1-203ENST00000525013 KIAA1107Q9UPP5 1409 aa29.41■■■□□ 2.3
CAPN1-203ENST00000525013 SUPT6HQ7KZ85 1726 aaKnown RBP29.4■■■□□ 2.3
CAPN1-203ENST00000525013 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
CAPN1-203ENST00000525013 REREQ9P2R6 1566 aa29.39■■■□□ 2.29
CAPN1-203ENST00000525013 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
CAPN1-203ENST00000525013 NCOA2Q15596 1464 aa29.37■■■□□ 2.29
CAPN1-203ENST00000525013 AGLP35573 1532 aa29.3■■■□□ 2.28
CAPN1-203ENST00000525013 ATP7AQ04656 1500 aa29.3■■■□□ 2.28
CAPN1-203ENST00000525013 LRRC9Q6ZRR7 1453 aa29.3■■■□□ 2.28
CAPN1-203ENST00000525013 ESF1Q9H501 851 aaKnown RBP29.28■■■□□ 2.28
CAPN1-203ENST00000525013 INO80Q9ULG1 1556 aaPredicted RBP29.27■■■□□ 2.28
CAPN1-203ENST00000525013 LMTK3Q96Q04 1460 aa29.27■■■□□ 2.28
CAPN1-203ENST00000525013 CEBPAP49715 358 aaPredicted RBP29.26■■■□□ 2.27
CAPN1-203ENST00000525013 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
CAPN1-203ENST00000525013 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
CAPN1-203ENST00000525013 MBD5Q9P267 1494 aa29.24■■■□□ 2.27
CAPN1-203ENST00000525013 APLP2Q06481 763 aa29.22■■■□□ 2.27
CAPN1-203ENST00000525013 CAMSAP2Q08AD1 1489 aa29.22■■■□□ 2.27
CAPN1-203ENST00000525013 A2MP01023 1474 aa29.19■■■□□ 2.26
CAPN1-203ENST00000525013 HSPA2P54652 639 aa29.19■■■□□ 2.26
CAPN1-203ENST00000525013 ADGBQ8N7X0 1667 aa29.17■■■□□ 2.26
CAPN1-203ENST00000525013 SETD1BQ9UPS6 1966 aaKnown RBP29.16■■■□□ 2.26
CAPN1-203ENST00000525013 CCDC141Q6ZP82 1450 aa29.16■■■□□ 2.26
CAPN1-203ENST00000525013 C3P01024 1663 aa29.15■■■□□ 2.26
CAPN1-203ENST00000525013 RSPH4AQ5TD94 716 aa29.14■■■□□ 2.26
CAPN1-203ENST00000525013 PLXNC1O60486 1568 aa29.13■■■□□ 2.25
CAPN1-203ENST00000525013 RTEL1-TNFRSF6BF6WH68 1400 aa29.13■■■□□ 2.25
CAPN1-203ENST00000525013 PREX1Q8TCU6 1659 aa29.13■■■□□ 2.25
CAPN1-203ENST00000525013 CNTLNQ9NXG0 1405 aa29.12■■■□□ 2.25
CAPN1-203ENST00000525013 GGT6Q6P531 493 aa29.1■■■□□ 2.25
CAPN1-203ENST00000525013 TSPY4P0CV99 314 aa29.08■■■□□ 2.25
CAPN1-203ENST00000525013 TSPY10P0CW01 314 aa29.08■■■□□ 2.25
CAPN1-203ENST00000525013 MYOM3Q5VTT5 1437 aa29.08■■■□□ 2.25
CAPN1-203ENST00000525013 ARHGEF5Q12774 1597 aa29.08■■■□□ 2.25
CAPN1-203ENST00000525013 UHRF1BP1Q6BDS2 1440 aa29.04■■■□□ 2.24
CAPN1-203ENST00000525013 DHX29Q7Z478 1369 aaKnown RBP29.04■■■□□ 2.24
CAPN1-203ENST00000525013 CLTCQ00610 1675 aaKnown RBP29.04■■■□□ 2.24
CAPN1-203ENST00000525013 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
CAPN1-203ENST00000525013 MROH2AA6NES4 1674 aa29.03■■■□□ 2.24
CAPN1-203ENST00000525013 ZMYM3Q14202 1370 aa29.01■■■□□ 2.24
CAPN1-203ENST00000525013 KIF3BO15066 747 aa28.99■■■□□ 2.23
CAPN1-203ENST00000525013 PPP6R1Q9UPN7 881 aa28.97■■■□□ 2.23
CAPN1-203ENST00000525013 ILDR1Q86SU0 546 aaPredicted RBP28.96■■■□□ 2.23
CAPN1-203ENST00000525013 NPATQ14207 1427 aa28.93■■■□□ 2.22
CAPN1-203ENST00000525013 MAST1Q9Y2H9 1570 aa28.92■■■□□ 2.22
CAPN1-203ENST00000525013 PTPN23Q9H3S7 1636 aa28.91■■■□□ 2.22
CAPN1-203ENST00000525013 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
CAPN1-203ENST00000525013 STRCQ7RTU9 1775 aa28.86■■■□□ 2.21
CAPN1-203ENST00000525013 PTPRKQ15262 1439 aa28.86■■■□□ 2.21
CAPN1-203ENST00000525013 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
CAPN1-203ENST00000525013 DMRT2Q9Y5R5 561 aa28.83■■■□□ 2.21
CAPN1-203ENST00000525013 KDM5DQ9BY66 1539 aa28.81■■■□□ 2.2
CAPN1-203ENST00000525013 ABCC5O15440 1437 aa28.81■■■□□ 2.2
CAPN1-203ENST00000525013 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms