RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
CHD7-202ENST00000524602 RRP7BPQ9NSQ0 103 aa11.63□□□□□ -0.55
CHD7-202ENST00000524602 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
CHD7-202ENST00000524602 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
CHD7-202ENST00000524602 CHD1O14646 1710 aa11.61□□□□□ -0.55
CHD7-202ENST00000524602 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
CHD7-202ENST00000524602 NEFLP07196 543 aa11.61□□□□□ -0.55
CHD7-202ENST00000524602 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
CHD7-202ENST00000524602 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
CHD7-202ENST00000524602 CHIC2Q9UKJ5 165 aa11.6□□□□□ -0.55
CHD7-202ENST00000524602 PLB1Q6P1J6 1458 aa11.6□□□□□ -0.55
CHD7-202ENST00000524602 RPRD2Q5VT52 1461 aaKnown RBP11.6□□□□□ -0.55
CHD7-202ENST00000524602 CDK11AQ9UQ88 783 aaPredicted RBP11.6□□□□□ -0.55
CHD7-202ENST00000524602 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
CHD7-202ENST00000524602 TSHZ2Q9NRE2 1034 aa11.59□□□□□ -0.55
CHD7-202ENST00000524602 ADCY10Q96PN6 1610 aa11.59□□□□□ -0.55
CHD7-202ENST00000524602 ABCC5O15440 1437 aa11.59□□□□□ -0.55
CHD7-202ENST00000524602 EIF4G2P78344 907 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD7-202ENST00000524602 ADGBQ8N7X0 1667 aa11.59□□□□□ -0.55
CHD7-202ENST00000524602 FKBP8Q14318 412 aa11.58□□□□□ -0.56
CHD7-202ENST00000524602 ANKRD30BQ9BXX2 1392 aa11.58□□□□□ -0.56
CHD7-202ENST00000524602 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
CHD7-202ENST00000524602 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
CHD7-202ENST00000524602 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
CHD7-202ENST00000524602 WASHC2AQ641Q2 1341 aa11.57□□□□□ -0.56
CHD7-202ENST00000524602 TROQ12816 1431 aaPredicted RBP11.56□□□□□ -0.56
CHD7-202ENST00000524602 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
CHD7-202ENST00000524602 NCOA1Q15788 1441 aa11.56□□□□□ -0.56
CHD7-202ENST00000524602 ADGRL2O95490 1459 aa11.55□□□□□ -0.56
CHD7-202ENST00000524602 L3MBTL2Q969R5 705 aa11.54□□□□□ -0.56
CHD7-202ENST00000524602 ABCA8O94911 1581 aa11.54□□□□□ -0.56
CHD7-202ENST00000524602 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
CHD7-202ENST00000524602 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
CHD7-202ENST00000524602 CCDC7Q96M83 1385 aa11.52□□□□□ -0.57
CHD7-202ENST00000524602 PRKCSHP14314 528 aaPredicted RBP11.52□□□□□ -0.57
CHD7-202ENST00000524602 KIF14Q15058 1648 aa11.52□□□□□ -0.57
CHD7-202ENST00000524602 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
CHD7-202ENST00000524602 PZPP20742 1482 aa11.51□□□□□ -0.57
CHD7-202ENST00000524602 GPATCH8Q9UKJ3 1502 aaKnown RBP11.5□□□□□ -0.57
CHD7-202ENST00000524602 SHROOM2Q13796 1616 aa11.5□□□□□ -0.57
CHD7-202ENST00000524602 ANP32EQ9BTT0 268 aa11.49□□□□□ -0.57
CHD7-202ENST00000524602 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
CHD7-202ENST00000524602 MBD5Q9P267 1494 aa11.49□□□□□ -0.57
CHD7-202ENST00000524602 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
CHD7-202ENST00000524602 BCANQ96GW7 911 aa11.49□□□□□ -0.57
CHD7-202ENST00000524602 SHANK2Q9UPX8 1470 aa11.48□□□□□ -0.57
CHD7-202ENST00000524602 ATP10BO94823 1461 aa11.48□□□□□ -0.57
CHD7-202ENST00000524602 HNRNPUQ00839 825 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD7-202ENST00000524602 ZNF644Q9H582 1327 aaPredicted RBP11.48□□□□□ -0.57
CHD7-202ENST00000524602 PTPRGP23470 1445 aa11.48□□□□□ -0.57
CHD7-202ENST00000524602 KIAA1107Q9UPP5 1409 aa11.48□□□□□ -0.57
CHD7-202ENST00000524602 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
CHD7-202ENST00000524602 ANKRD30AQ9BXX3 1397 aa11.47□□□□□ -0.57
CHD7-202ENST00000524602 FOXD1Q16676 465 aa11.46□□□□□ -0.57
CHD7-202ENST00000524602 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.57
CHD7-202ENST00000524602 ERCC6L2Q5T890 1561 aa11.46□□□□□ -0.58
CHD7-202ENST00000524602 NBPF8Q3BBV2 869 aa11.46□□□□□ -0.58
CHD7-202ENST00000524602 CDC42BPAQ5VT25 1732 aa11.46□□□□□ -0.58
CHD7-202ENST00000524602 KDM5DQ9BY66 1539 aa11.45□□□□□ -0.58
CHD7-202ENST00000524602 ARID4BQ4LE39 1312 aaPredicted RBP11.45□□□□□ -0.58
CHD7-202ENST00000524602 PLEKHD1A6NEE1 506 aa11.44□□□□□ -0.58
CHD7-202ENST00000524602 ABCC10Q5T3U5 1492 aa11.43□□□□□ -0.58
CHD7-202ENST00000524602 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
CHD7-202ENST00000524602 C11orf95C9JLR9 678 aaPredicted RBP11.43□□□□□ -0.58
CHD7-202ENST00000524602 KIF7Q2M1P5 1343 aa11.43□□□□□ -0.58
CHD7-202ENST00000524602 UHRF1BP1Q6BDS2 1440 aa11.42□□□□□ -0.58
CHD7-202ENST00000524602 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
CHD7-202ENST00000524602 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
CHD7-202ENST00000524602 ZBED9Q6R2W3 1325 aa11.42□□□□□ -0.58
CHD7-202ENST00000524602 ARHGEF5Q12774 1597 aa11.42□□□□□ -0.58
CHD7-202ENST00000524602 KDM5CP41229 1560 aa11.41□□□□□ -0.58
CHD7-202ENST00000524602 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
CHD7-202ENST00000524602 RALGAPBQ86X10 1494 aa11.4□□□□□ -0.59
CHD7-202ENST00000524602 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
CHD7-202ENST00000524602 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
CHD7-202ENST00000524602 ROCK2O75116 1388 aaKnown RBP11.39□□□□□ -0.59
CHD7-202ENST00000524602 USP47Q96K76 1375 aa11.39□□□□□ -0.59
CHD7-202ENST00000524602 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
CHD7-202ENST00000524602 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
CHD7-202ENST00000524602 ABCC2Q92887 1545 aa11.37□□□□□ -0.59
CHD7-202ENST00000524602 PKD2Q13563 968 aa11.37□□□□□ -0.59
CHD7-202ENST00000524602 DHX29Q7Z478 1369 aaKnown RBP11.37□□□□□ -0.59
CHD7-202ENST00000524602 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
CHD7-202ENST00000524602 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
CHD7-202ENST00000524602 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
CHD7-202ENST00000524602 CDC42BPBQ9Y5S2 1711 aa11.35□□□□□ -0.59
CHD7-202ENST00000524602 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
CHD7-202ENST00000524602 NUP155O75694 1391 aa11.34□□□□□ -0.59
CHD7-202ENST00000524602 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
CHD7-202ENST00000524602 TSPY4P0CV99 314 aa11.34□□□□□ -0.59
CHD7-202ENST00000524602 TSPY10P0CW01 314 aa11.34□□□□□ -0.59
CHD7-202ENST00000524602 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
CHD7-202ENST00000524602 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
CHD7-202ENST00000524602 TTC37Q6PGP7 1564 aa11.33□□□□□ -0.6
CHD7-202ENST00000524602 CCDC141Q6ZP82 1450 aa11.33□□□□□ -0.6
CHD7-202ENST00000524602 MAST1Q9Y2H9 1570 aa11.33□□□□□ -0.6
CHD7-202ENST00000524602 ZCCHC11Q5TAX3 1644 aaKnown RBP11.33□□□□□ -0.6
CHD7-202ENST00000524602 KIF15Q9NS87 1388 aa11.32□□□□□ -0.6
CHD7-202ENST00000524602 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
CHD7-202ENST00000524602 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms