RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
VEGFA-224ENST00000523873 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
VEGFA-224ENST00000523873 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
VEGFA-224ENST00000523873 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
VEGFA-224ENST00000523873 FRMPD1Q5SYB0 1578 aa20.17■□□□□ 0.82
VEGFA-224ENST00000523873 RICTORQ6R327 1708 aa20.17■□□□□ 0.82
VEGFA-224ENST00000523873 APLP2Q06481 763 aa20.17■□□□□ 0.82
VEGFA-224ENST00000523873 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
VEGFA-224ENST00000523873 ADGRL1O94910 1474 aa20.14■□□□□ 0.81
VEGFA-224ENST00000523873 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
VEGFA-224ENST00000523873 PHLDB1Q86UU1 1377 aa20.13■□□□□ 0.81
VEGFA-224ENST00000523873 EFCAB2Q5VUJ9 269 aa20.13■□□□□ 0.81
VEGFA-224ENST00000523873 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
VEGFA-224ENST00000523873 DENND4BO75064 1496 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-224ENST00000523873 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-224ENST00000523873 ABCC1P33527 1531 aa20.1■□□□□ 0.81
VEGFA-224ENST00000523873 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
VEGFA-224ENST00000523873 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
VEGFA-224ENST00000523873 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-224ENST00000523873 POGZQ7Z3K3 1410 aa20.05■□□□□ 0.8
VEGFA-224ENST00000523873 SYCP2Q9BX26 1530 aa20.05■□□□□ 0.8
VEGFA-224ENST00000523873 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
VEGFA-224ENST00000523873 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.8
VEGFA-224ENST00000523873 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.79
VEGFA-224ENST00000523873 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.79
VEGFA-224ENST00000523873 CAMSAP2Q08AD1 1489 aa20■□□□□ 0.79
VEGFA-224ENST00000523873 MYOM3Q5VTT5 1437 aa20■□□□□ 0.79
VEGFA-224ENST00000523873 KDM5CP41229 1560 aa20■□□□□ 0.79
VEGFA-224ENST00000523873 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.791e-12■■■■■ 34.3
VEGFA-224ENST00000523873 AFAP1Q8N556 730 aa19.98■□□□□ 0.79
VEGFA-224ENST00000523873 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
VEGFA-224ENST00000523873 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
VEGFA-224ENST00000523873 HECW2Q9P2P5 1572 aa19.97■□□□□ 0.79
VEGFA-224ENST00000523873 PLEKHH2Q8IVE3 1493 aa19.97■□□□□ 0.79
VEGFA-224ENST00000523873 ZFYVE16Q7Z3T8 1539 aa19.97■□□□□ 0.79
VEGFA-224ENST00000523873 YEATS2Q9ULM3 1422 aa19.96■□□□□ 0.79
VEGFA-224ENST00000523873 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
VEGFA-224ENST00000523873 PTPN23Q9H3S7 1636 aa19.95■□□□□ 0.78
VEGFA-224ENST00000523873 SIGLEC1Q9BZZ2 1709 aa19.95■□□□□ 0.78
VEGFA-224ENST00000523873 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
VEGFA-224ENST00000523873 ABCA6Q8N139 1617 aa19.93■□□□□ 0.78
VEGFA-224ENST00000523873 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
VEGFA-224ENST00000523873 MIA2Q96PC5 1412 aa19.92■□□□□ 0.78
VEGFA-224ENST00000523873 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
VEGFA-224ENST00000523873 MAGI2Q86UL8 1455 aa19.91■□□□□ 0.78
VEGFA-224ENST00000523873 DIP2CQ9Y2E4 1556 aa19.91■□□□□ 0.78
VEGFA-224ENST00000523873 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
VEGFA-224ENST00000523873 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
VEGFA-224ENST00000523873 ARHGEF5Q12774 1597 aa19.89■□□□□ 0.77
VEGFA-224ENST00000523873 MLH3Q9UHC1 1453 aa19.88■□□□□ 0.77
VEGFA-224ENST00000523873 ATP7AQ04656 1500 aa19.87■□□□□ 0.77
VEGFA-224ENST00000523873 CROCC2H7BZ55 1655 aa19.87■□□□□ 0.77
VEGFA-224ENST00000523873 CCDC141Q6ZP82 1450 aa19.86■□□□□ 0.77
VEGFA-224ENST00000523873 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
VEGFA-224ENST00000523873 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
VEGFA-224ENST00000523873 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
VEGFA-224ENST00000523873 ATP10AO60312 1499 aa19.84■□□□□ 0.77
VEGFA-224ENST00000523873 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
VEGFA-224ENST00000523873 DNMT1P26358 1616 aaKnown RBP19.82■□□□□ 0.76
VEGFA-224ENST00000523873 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
VEGFA-224ENST00000523873 ARID4BQ4LE39 1312 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-224ENST00000523873 MAST1Q9Y2H9 1570 aa19.79■□□□□ 0.76
VEGFA-224ENST00000523873 KDM4FA0A1W2PPD8 638 aa19.79■□□□□ 0.76
VEGFA-224ENST00000523873 FAM50AQ14320 339 aaKnown RBP19.78■□□□□ 0.76
VEGFA-224ENST00000523873 REREQ9P2R6 1566 aa19.78■□□□□ 0.76
VEGFA-224ENST00000523873 ABCC5O15440 1437 aa19.77■□□□□ 0.76
VEGFA-224ENST00000523873 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.76
VEGFA-224ENST00000523873 DAPK1P53355 1430 aa19.76■□□□□ 0.75
VEGFA-224ENST00000523873 RSPH4AQ5TD94 716 aa19.76■□□□□ 0.75
VEGFA-224ENST00000523873 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
VEGFA-224ENST00000523873 MADDQ8WXG6 1647 aa19.75■□□□□ 0.75
VEGFA-224ENST00000523873 MLECQ14165 292 aa19.74■□□□□ 0.75
VEGFA-224ENST00000523873 FER1L4A9Z1Z3 1794 aa19.74■□□□□ 0.75
VEGFA-224ENST00000523873 PLXNC1O60486 1568 aa19.74■□□□□ 0.75
VEGFA-224ENST00000523873 RIMS1Q86UR5 1692 aaKnown RBP19.73■□□□□ 0.75
VEGFA-224ENST00000523873 TSPY4P0CV99 314 aa19.73■□□□□ 0.75
VEGFA-224ENST00000523873 TSPY10P0CW01 314 aa19.73■□□□□ 0.75
VEGFA-224ENST00000523873 A2MP01023 1474 aa19.73■□□□□ 0.75
VEGFA-224ENST00000523873 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
VEGFA-224ENST00000523873 AGLP35573 1532 aa19.71■□□□□ 0.75
VEGFA-224ENST00000523873 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
VEGFA-224ENST00000523873 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
VEGFA-224ENST00000523873 PTPRKQ15262 1439 aa19.67■□□□□ 0.74
VEGFA-224ENST00000523873 ITGAEP38570 1179 aa19.65■□□□□ 0.74
VEGFA-224ENST00000523873 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
VEGFA-224ENST00000523873 RRP7BPQ9NSQ0 103 aa19.63■□□□□ 0.73
VEGFA-224ENST00000523873 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
VEGFA-224ENST00000523873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.61■□□□□ 0.733e-7■■■□□ 14.6
VEGFA-224ENST00000523873 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
VEGFA-224ENST00000523873 CLTCQ00610 1675 aaKnown RBP19.61■□□□□ 0.73
VEGFA-224ENST00000523873 ADGRL2O95490 1459 aa19.6■□□□□ 0.73
VEGFA-224ENST00000523873 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
VEGFA-224ENST00000523873 EIF2AK4Q9P2K8 1649 aaKnown RBP19.6■□□□□ 0.73
VEGFA-224ENST00000523873 ANKRD30AQ9BXX3 1397 aa19.59■□□□□ 0.73
VEGFA-224ENST00000523873 PTPRMP28827 1452 aa19.59■□□□□ 0.73
VEGFA-224ENST00000523873 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
VEGFA-224ENST00000523873 KIF3BO15066 747 aa19.58■□□□□ 0.72
VEGFA-224ENST00000523873 GGT6Q6P531 493 aa19.58■□□□□ 0.72
VEGFA-224ENST00000523873 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
VEGFA-224ENST00000523873 C3P01024 1663 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms