RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 OCEL1Q9H607 264 aa7.23□□□□□ -1.25
NPM1-210ENST00000523339 EIF4G3O43432 1585 aaKnown RBP7.23□□□□□ -1.25
NPM1-210ENST00000523339 PCDH10Q9P2E7 1040 aa7.22□□□□□ -1.25
NPM1-210ENST00000523339 WIZO95785 1651 aa7.21□□□□□ -1.26
NPM1-210ENST00000523339 CHRM1P11229 460 aaPredicted RBP7.2□□□□□ -1.26
NPM1-210ENST00000523339 CHD1O14646 1710 aa7.2□□□□□ -1.26
NPM1-210ENST00000523339 TOPBP1Q92547 1522 aa7.19□□□□□ -1.26
NPM1-210ENST00000523339 PDCD7Q8N8D1 485 aaKnown RBP7.19□□□□□ -1.26
NPM1-210ENST00000523339 ABCC8Q09428 1581 aa7.18□□□□□ -1.26
NPM1-210ENST00000523339 DPY19L2Q6NUT2 758 aa7.18□□□□□ -1.26
NPM1-210ENST00000523339 CDAN1Q8IWY9 1227 aa7.18□□□□□ -1.26
NPM1-210ENST00000523339 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
NPM1-210ENST00000523339 GSE1Q14687 1217 aa7.17□□□□□ -1.26
NPM1-210ENST00000523339 TDRD9Q8NDG6 1382 aaKnown RBP7.17□□□□□ -1.26
NPM1-210ENST00000523339 SYNJ1O43426 1573 aa7.16□□□□□ -1.26
NPM1-210ENST00000523339 PSEN1P49768 467 aa7.16□□□□□ -1.26
NPM1-210ENST00000523339 SNAPC4Q5SXM2 1469 aa7.15□□□□□ -1.27
NPM1-210ENST00000523339 ZNF467Q7Z7K2 595 aaPredicted RBP7.13□□□□□ -1.27
NPM1-210ENST00000523339 DNMBPQ6XZF7 1577 aa7.12□□□□□ -1.27
NPM1-210ENST00000523339 SOGA1O94964 1423 aa7.12□□□□□ -1.27
NPM1-210ENST00000523339 FAM69CQ0P6D2 419 aa7.12□□□□□ -1.27
NPM1-210ENST00000523339 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.12□□□□□ -1.27
NPM1-210ENST00000523339 TOP2AP11388 1531 aaKnown RBP7.11□□□□□ -1.27
NPM1-210ENST00000523339 CLASP1Q7Z460 1538 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 KDM4FA0A1W2PPD8 638 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 POTEB3A0JP26 581 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 POTEBQ6S5H4 581 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 SPOCK2Q92563 424 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 MARVELD3Q96A59 401 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.11□□□□□ -1.27
NPM1-210ENST00000523339 CIZ1Q9ULV3 898 aaPredicted RBP7.11□□□□□ -1.27
NPM1-210ENST00000523339 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
NPM1-210ENST00000523339 MKRN3Q13064 507 aaKnown RBP7.1□□□□□ -1.27
NPM1-210ENST00000523339 SYNJ2O15056 1496 aa7.09□□□□□ -1.27
NPM1-210ENST00000523339 POLA1P09884 1462 aaPredicted RBP7.09□□□□□ -1.27
NPM1-210ENST00000523339 MAGI1Q96QZ7 1491 aaPredicted RBP7.09□□□□□ -1.27
NPM1-210ENST00000523339 CABP2Q9NPB3 220 aa7.08□□□□□ -1.28
NPM1-210ENST00000523339 GRIN2BQ13224 1484 aa7.08□□□□□ -1.28
NPM1-210ENST00000523339 TARBP1Q13395 1621 aaKnown RBP7.08□□□□□ -1.28
NPM1-210ENST00000523339 PDAP1Q13442 181 aaKnown RBP7.07□□□□□ -1.28
NPM1-210ENST00000523339 CCDC88BA6NC98 1476 aa7.06□□□□□ -1.28
NPM1-210ENST00000523339 PRDM2Q13029 1718 aa7.05□□□□□ -1.28
NPM1-210ENST00000523339 GOLGA2Q08379 1002 aa7.05□□□□□ -1.28
NPM1-210ENST00000523339 FBXO41Q8TF61 875 aa7.05□□□□□ -1.28
NPM1-210ENST00000523339 L3MBTL3Q96JM7 780 aaPredicted RBP7.05□□□□□ -1.28
NPM1-210ENST00000523339 SPNS2Q8IVW8 549 aa7.04□□□□□ -1.28
NPM1-210ENST00000523339 KDM6BO15054 1643 aa7.02□□□□□ -1.29
NPM1-210ENST00000523339 SNPHO15079 494 aa7.02□□□□□ -1.29
NPM1-210ENST00000523339 EFCAB3Q8N7B9 438 aa7.02□□□□□ -1.29
NPM1-210ENST00000523339 FGD5Q6ZNL6 1462 aa7.02□□□□□ -1.29
NPM1-210ENST00000523339 HOXB3P14651 431 aaPredicted RBP7.01□□□□□ -1.29
NPM1-210ENST00000523339 MMRN1Q13201 1228 aa7.01□□□□□ -1.29
NPM1-210ENST00000523339 TMEM121BQ9BXQ6 578 aaPredicted RBP7.01□□□□□ -1.29
NPM1-210ENST00000523339 WDR97A6NE52 1622 aa7.01□□□□□ -1.29
NPM1-210ENST00000523339 ERCC6L2Q5T890 1561 aa7□□□□□ -1.29
NPM1-210ENST00000523339 LMTK3Q96Q04 1460 aa7□□□□□ -1.29
NPM1-210ENST00000523339 C3orf67Q6ZVT6 689 aa7□□□□□ -1.29
NPM1-210ENST00000523339 RNF25Q96BH1 459 aaPredicted RBP7□□□□□ -1.29
NPM1-210ENST00000523339 BOLA1Q9Y3E2 137 aa7□□□□□ -1.29
NPM1-210ENST00000523339 ABCC10Q5T3U5 1492 aa6.99□□□□□ -1.29
NPM1-210ENST00000523339 TMEM92Q6UXU6 159 aa6.99□□□□□ -1.29
NPM1-210ENST00000523339 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
NPM1-210ENST00000523339 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
NPM1-210ENST00000523339 ADGRL1O94910 1474 aa6.98□□□□□ -1.29
NPM1-210ENST00000523339 FAM205CA6NFA0 338 aa6.98□□□□□ -1.29
NPM1-210ENST00000523339 HECW2Q9P2P5 1572 aa6.98□□□□□ -1.29
NPM1-210ENST00000523339 TTBK1Q5TCY1 1321 aaPredicted RBP6.98□□□□□ -1.29
NPM1-210ENST00000523339 CEP170Q5SW79 1584 aa6.97□□□□□ -1.29
NPM1-210ENST00000523339 PRG4Q92954 1404 aaPredicted RBP6.97□□□□□ -1.29
NPM1-210ENST00000523339 HS3ST6Q96QI5 342 aa6.97□□□□□ -1.29
NPM1-210ENST00000523339 GRIN2AQ12879 1464 aa6.97□□□□□ -1.29
NPM1-210ENST00000523339 MS4A4AQ96JQ5 239 aa6.96□□□□□ -1.3
NPM1-210ENST00000523339 KIF13AQ9H1H9 1805 aa6.95□□□□□ -1.3
NPM1-210ENST00000523339 EMP3P54852 163 aa6.95□□□□□ -1.3
NPM1-210ENST00000523339 JPH4Q96JJ6 628 aa6.94□□□□□ -1.3
NPM1-210ENST00000523339 DISP3Q9P2K9 1392 aa6.94□□□□□ -1.3
NPM1-210ENST00000523339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.93□□□□□ -1.3
NPM1-210ENST00000523339 SOCS7O14512 581 aa6.93□□□□□ -1.3
NPM1-210ENST00000523339 ZFP91Q96JP5 570 aaPredicted RBP6.93□□□□□ -1.3
NPM1-210ENST00000523339 PBRM1Q86U86 1689 aa6.93□□□□□ -1.3
NPM1-210ENST00000523339 DIP2BQ9P265 1576 aa6.92□□□□□ -1.3
NPM1-210ENST00000523339 PHF8Q9UPP1 1060 aa6.92□□□□□ -1.3
NPM1-210ENST00000523339 NUP160Q12769 1436 aa6.92□□□□□ -1.3
NPM1-210ENST00000523339 MAPKBP1O60336 1514 aa6.91□□□□□ -1.3
NPM1-210ENST00000523339 TSPOAP1O95153 1857 aa6.9□□□□□ -1.3
NPM1-210ENST00000523339 HOXB1P14653 301 aaPredicted RBP6.9□□□□□ -1.3
NPM1-210ENST00000523339 MICALL2Q8IY33 904 aa6.9□□□□□ -1.3
NPM1-210ENST00000523339 FHAD1B1AJZ9 1412 aa6.9□□□□□ -1.31
NPM1-210ENST00000523339 CUX1P39880 1505 aa6.9□□□□□ -1.31
NPM1-210ENST00000523339 RIOK3O14730 519 aaKnown RBP6.89□□□□□ -1.31
NPM1-210ENST00000523339 ABCA10Q8WWZ4 1543 aa6.88□□□□□ -1.31
NPM1-210ENST00000523339 WRNQ14191 1432 aaPredicted RBP eCLIP6.87□□□□□ -1.313e-7■■□□□ 13.1
NPM1-210ENST00000523339 SOX12O15370 315 aa6.87□□□□□ -1.31
NPM1-210ENST00000523339 SHROOM2Q13796 1616 aa6.87□□□□□ -1.31
NPM1-210ENST00000523339 ADAMTS12P58397 1594 aa6.86□□□□□ -1.31
NPM1-210ENST00000523339 G3V3G9 751 aa6.86□□□□□ -1.31
NPM1-210ENST00000523339 GPR153Q6NV75 609 aa6.86□□□□□ -1.31
NPM1-210ENST00000523339 ABCA5Q8WWZ7 1642 aa6.86□□□□□ -1.31
NPM1-210ENST00000523339 ILDR2Q71H61 639 aa6.85□□□□□ -1.31
NPM1-210ENST00000523339 FBXO22Q8NEZ5 403 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms