RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
DENND3-221ENST00000523308 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
DENND3-221ENST00000523308 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
DENND3-221ENST00000523308 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
DENND3-221ENST00000523308 IGSF3O75054 1194 aa17.01■□□□□ 0.31
DENND3-221ENST00000523308 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
DENND3-221ENST00000523308 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
DENND3-221ENST00000523308 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
DENND3-221ENST00000523308 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
DENND3-221ENST00000523308 PTPRKQ15262 1439 aa17■□□□□ 0.31
DENND3-221ENST00000523308 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
DENND3-221ENST00000523308 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
DENND3-221ENST00000523308 FGD6Q6ZV73 1430 aa16.98■□□□□ 0.31
DENND3-221ENST00000523308 SECISBP2LQ93073 1101 aaKnown RBP16.98■□□□□ 0.31
DENND3-221ENST00000523308 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
DENND3-221ENST00000523308 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
DENND3-221ENST00000523308 TEX2Q8IWB9 1127 aa16.96■□□□□ 0.31
DENND3-221ENST00000523308 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
DENND3-221ENST00000523308 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
DENND3-221ENST00000523308 FKBP8Q14318 412 aa16.94■□□□□ 0.3
DENND3-221ENST00000523308 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
DENND3-221ENST00000523308 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
DENND3-221ENST00000523308 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
DENND3-221ENST00000523308 CHRM1P11229 460 aaPredicted RBP16.92■□□□□ 0.3
DENND3-221ENST00000523308 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
DENND3-221ENST00000523308 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
DENND3-221ENST00000523308 FOXD1Q16676 465 aa16.91■□□□□ 0.3
DENND3-221ENST00000523308 CNPY4Q8N129 248 aa16.91■□□□□ 0.3
DENND3-221ENST00000523308 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
DENND3-221ENST00000523308 ANP32CO43423 234 aa16.9■□□□□ 0.3
DENND3-221ENST00000523308 CUL7Q14999 1698 aa16.9■□□□□ 0.3
DENND3-221ENST00000523308 NCOA2Q15596 1464 aa16.9■□□□□ 0.3
DENND3-221ENST00000523308 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
DENND3-221ENST00000523308 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
DENND3-221ENST00000523308 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
DENND3-221ENST00000523308 NAIPQ13075 1403 aa16.85■□□□□ 0.29
DENND3-221ENST00000523308 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
DENND3-221ENST00000523308 PRDM10Q9NQV6 1147 aa16.84■□□□□ 0.29
DENND3-221ENST00000523308 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
DENND3-221ENST00000523308 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
DENND3-221ENST00000523308 STAC3Q96MF2 364 aa16.83■□□□□ 0.28
DENND3-221ENST00000523308 HFM1A2PYH4 1435 aa16.83■□□□□ 0.28
DENND3-221ENST00000523308 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.28
DENND3-221ENST00000523308 MAGI3Q5TCQ9 1506 aa16.82■□□□□ 0.28
DENND3-221ENST00000523308 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
DENND3-221ENST00000523308 PTPN23Q9H3S7 1636 aa16.82■□□□□ 0.28
DENND3-221ENST00000523308 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
DENND3-221ENST00000523308 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
DENND3-221ENST00000523308 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
DENND3-221ENST00000523308 C11orf95C9JLR9 678 aaPredicted RBP16.8■□□□□ 0.28
DENND3-221ENST00000523308 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
DENND3-221ENST00000523308 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
DENND3-221ENST00000523308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
DENND3-221ENST00000523308 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
DENND3-221ENST00000523308 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
DENND3-221ENST00000523308 CDK13Q14004 1512 aaKnown RBP16.79■□□□□ 0.28
DENND3-221ENST00000523308 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
DENND3-221ENST00000523308 KCNG1Q9UIX4 513 aa16.78■□□□□ 0.28
DENND3-221ENST00000523308 PRDM4Q9UKN5 801 aa16.78■□□□□ 0.28
DENND3-221ENST00000523308 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
DENND3-221ENST00000523308 RRP9O43818 475 aaKnown RBP16.77■□□□□ 0.28
DENND3-221ENST00000523308 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.27
DENND3-221ENST00000523308 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
DENND3-221ENST00000523308 NBR1Q14596 966 aa16.76■□□□□ 0.27
DENND3-221ENST00000523308 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
DENND3-221ENST00000523308 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
DENND3-221ENST00000523308 KDM6BO15054 1643 aa16.74■□□□□ 0.27
DENND3-221ENST00000523308 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.74■□□□□ 0.27
DENND3-221ENST00000523308 TICAM2Q86XR7 235 aa16.72■□□□□ 0.27
DENND3-221ENST00000523308 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
DENND3-221ENST00000523308 WWC1Q8IX03 1113 aa16.72■□□□□ 0.27
DENND3-221ENST00000523308 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
DENND3-221ENST00000523308 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
DENND3-221ENST00000523308 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
DENND3-221ENST00000523308 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
DENND3-221ENST00000523308 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
DENND3-221ENST00000523308 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
DENND3-221ENST00000523308 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
DENND3-221ENST00000523308 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
DENND3-221ENST00000523308 FBLN2P98095 1184 aa16.68■□□□□ 0.26
DENND3-221ENST00000523308 EPRSP07814 1512 aaKnown RBP16.68■□□□□ 0.26
DENND3-221ENST00000523308 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
DENND3-221ENST00000523308 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
DENND3-221ENST00000523308 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
DENND3-221ENST00000523308 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
DENND3-221ENST00000523308 KDM5BQ9UGL1 1544 aa16.67■□□□□ 0.26
DENND3-221ENST00000523308 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
DENND3-221ENST00000523308 RGS3P49796 1198 aa16.67■□□□□ 0.26
DENND3-221ENST00000523308 ZNF592Q92610 1267 aa16.66■□□□□ 0.26
DENND3-221ENST00000523308 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
DENND3-221ENST00000523308 TMED8Q6PL24 325 aaPredicted RBP16.66■□□□□ 0.26
DENND3-221ENST00000523308 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
DENND3-221ENST00000523308 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
DENND3-221ENST00000523308 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
DENND3-221ENST00000523308 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
DENND3-221ENST00000523308 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
DENND3-221ENST00000523308 CALD1Q05682 793 aaKnown RBP16.62■□□□□ 0.25
DENND3-221ENST00000523308 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
DENND3-221ENST00000523308 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
DENND3-221ENST00000523308 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms