RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 HFM1A2PYH4 1435 aa9.71□□□□□ -0.85
SHPRH-210ENST00000523276 NUP160Q12769 1436 aa9.71□□□□□ -0.85
SHPRH-210ENST00000523276 NUP153P49790 1475 aaKnown RBP9.7□□□□□ -0.86
SHPRH-210ENST00000523276 MIA2Q96PC5 1412 aa9.69□□□□□ -0.86
SHPRH-210ENST00000523276 RAPGEF6Q8TEU7 1601 aa9.68□□□□□ -0.86
SHPRH-210ENST00000523276 NAIPQ13075 1403 aa9.68□□□□□ -0.86
SHPRH-210ENST00000523276 FBLN2P98095 1184 aa9.66□□□□□ -0.86
SHPRH-210ENST00000523276 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
SHPRH-210ENST00000523276 UACAQ9BZF9 1416 aa9.66□□□□□ -0.86
SHPRH-210ENST00000523276 ARID3CA6NKF2 412 aa9.66□□□□□ -0.86
SHPRH-210ENST00000523276 TIMELESSQ9UNS1 1208 aa9.66□□□□□ -0.86
SHPRH-210ENST00000523276 AKNAQ7Z591 1439 aa9.66□□□□□ -0.86
SHPRH-210ENST00000523276 JPH4Q96JJ6 628 aa9.65□□□□□ -0.87
SHPRH-210ENST00000523276 SIN3AQ96ST3 1273 aa9.65□□□□□ -0.87
SHPRH-210ENST00000523276 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-210ENST00000523276 MIER1Q8N108 512 aa9.64□□□□□ -0.87
SHPRH-210ENST00000523276 CDK11AQ9UQ88 783 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-210ENST00000523276 PLB1Q6P1J6 1458 aa9.63□□□□□ -0.87
SHPRH-210ENST00000523276 TROQ12816 1431 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-210ENST00000523276 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
SHPRH-210ENST00000523276 NEUROD1Q13562 356 aa9.62□□□□□ -0.87
SHPRH-210ENST00000523276 CAPN15O75808 1086 aa9.61□□□□□ -0.87
SHPRH-210ENST00000523276 CENPBP07199 599 aaPredicted RBP9.61□□□□□ -0.87
SHPRH-210ENST00000523276 GCC2Q8IWJ2 1684 aa9.61□□□□□ -0.87
SHPRH-210ENST00000523276 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
SHPRH-210ENST00000523276 RRP7BPQ9NSQ0 103 aa9.6□□□□□ -0.87
SHPRH-210ENST00000523276 DSG3P32926 999 aa9.6□□□□□ -0.87
SHPRH-210ENST00000523276 CHIC2Q9UKJ5 165 aa9.6□□□□□ -0.87
SHPRH-210ENST00000523276 DAPK1P53355 1430 aa9.59□□□□□ -0.87
SHPRH-210ENST00000523276 ABCA8O94911 1581 aa9.59□□□□□ -0.87
SHPRH-210ENST00000523276 ROCK1Q13464 1354 aa9.59□□□□□ -0.87
SHPRH-210ENST00000523276 ADCY10Q96PN6 1610 aa9.58□□□□□ -0.88
SHPRH-210ENST00000523276 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-210ENST00000523276 ABCC5O15440 1437 aa9.58□□□□□ -0.88
SHPRH-210ENST00000523276 DNMT1P26358 1616 aaKnown RBP9.58□□□□□ -0.88
SHPRH-210ENST00000523276 KDM6BO15054 1643 aa9.57□□□□□ -0.88
SHPRH-210ENST00000523276 GPATCH8Q9UKJ3 1502 aaKnown RBP9.56□□□□□ -0.88
SHPRH-210ENST00000523276 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-210ENST00000523276 TONSLQ96HA7 1378 aa9.56□□□□□ -0.88
SHPRH-210ENST00000523276 ZNF644Q9H582 1327 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-210ENST00000523276 DENND4BO75064 1496 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-210ENST00000523276 KIF14Q15058 1648 aa9.55□□□□□ -0.88
SHPRH-210ENST00000523276 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
SHPRH-210ENST00000523276 ATP10BO94823 1461 aa9.55□□□□□ -0.88
SHPRH-210ENST00000523276 CAMSAP2Q08AD1 1489 aa9.55□□□□□ -0.88
SHPRH-210ENST00000523276 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
SHPRH-210ENST00000523276 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-210ENST00000523276 ZNF219Q9P2Y4 722 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-210ENST00000523276 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-210ENST00000523276 PTPRGP23470 1445 aa9.54□□□□□ -0.88
SHPRH-210ENST00000523276 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
SHPRH-210ENST00000523276 ABCC10Q5T3U5 1492 aa9.53□□□□□ -0.88
SHPRH-210ENST00000523276 PLEKHD1A6NEE1 506 aa9.53□□□□□ -0.88
SHPRH-210ENST00000523276 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
SHPRH-210ENST00000523276 KDM5BQ9UGL1 1544 aa9.52□□□□□ -0.88
SHPRH-210ENST00000523276 CHD1O14646 1710 aa9.52□□□□□ -0.89
SHPRH-210ENST00000523276 MPHOSPH9Q99550 1183 aa9.52□□□□□ -0.89
SHPRH-210ENST00000523276 SHROOM2Q13796 1616 aa9.51□□□□□ -0.89
SHPRH-210ENST00000523276 ADGRL2O95490 1459 aa9.51□□□□□ -0.89
SHPRH-210ENST00000523276 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
SHPRH-210ENST00000523276 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
SHPRH-210ENST00000523276 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
SHPRH-210ENST00000523276 ADGBQ8N7X0 1667 aa9.48□□□□□ -0.89
SHPRH-210ENST00000523276 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-210ENST00000523276 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-210ENST00000523276 SHANK2Q9UPX8 1470 aa9.48□□□□□ -0.89
SHPRH-210ENST00000523276 ANKRD30BQ9BXX2 1392 aa9.48□□□□□ -0.89
SHPRH-210ENST00000523276 CDC42BPAQ5VT25 1732 aa9.48□□□□□ -0.89
SHPRH-210ENST00000523276 ANKRD30AQ9BXX3 1397 aa9.47□□□□□ -0.89
SHPRH-210ENST00000523276 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
SHPRH-210ENST00000523276 ABCB7O75027 752 aa9.46□□□□□ -0.89
SHPRH-210ENST00000523276 PZPP20742 1482 aa9.46□□□□□ -0.9
SHPRH-210ENST00000523276 DDX10Q13206 875 aaKnown RBP9.45□□□□□ -0.9
SHPRH-210ENST00000523276 BCANQ96GW7 911 aa9.45□□□□□ -0.9
SHPRH-210ENST00000523276 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
SHPRH-210ENST00000523276 ABCC2Q92887 1545 aa9.45□□□□□ -0.9
SHPRH-210ENST00000523276 RPRD2Q5VT52 1461 aaKnown RBP9.45□□□□□ -0.9
SHPRH-210ENST00000523276 C9orf84Q5VXU9 1444 aa9.45□□□□□ -0.9
SHPRH-210ENST00000523276 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
SHPRH-210ENST00000523276 ARHGEF5Q12774 1597 aa9.44□□□□□ -0.9
SHPRH-210ENST00000523276 HIRIP3Q9BW71 556 aaPredicted RBP9.44□□□□□ -0.9
SHPRH-210ENST00000523276 ANKRD50Q9ULJ7 1429 aa9.44□□□□□ -0.9
SHPRH-210ENST00000523276 MBD5Q9P267 1494 aa9.43□□□□□ -0.9
SHPRH-210ENST00000523276 ATXN8OSP0DMR3 200 aa9.43□□□□□ -0.9
SHPRH-210ENST00000523276 PREX2Q70Z35 1606 aa9.43□□□□□ -0.9
SHPRH-210ENST00000523276 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
SHPRH-210ENST00000523276 TEX14Q8IWB6 1497 aa9.42□□□□□ -0.9
SHPRH-210ENST00000523276 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
SHPRH-210ENST00000523276 KIAA1107Q9UPP5 1409 aa9.41□□□□□ -0.9
SHPRH-210ENST00000523276 TSPY4P0CV99 314 aa9.41□□□□□ -0.9
SHPRH-210ENST00000523276 TSPY10P0CW01 314 aa9.41□□□□□ -0.9
SHPRH-210ENST00000523276 CCDC141Q6ZP82 1450 aa9.41□□□□□ -0.9
SHPRH-210ENST00000523276 UHRF1BP1LA0JNW5 1464 aa9.4□□□□□ -0.9
SHPRH-210ENST00000523276 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.9
SHPRH-210ENST00000523276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.4□□□□□ -0.91
SHPRH-210ENST00000523276 KDM5DQ9BY66 1539 aa9.4□□□□□ -0.91
SHPRH-210ENST00000523276 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
SHPRH-210ENST00000523276 KIF15Q9NS87 1388 aa9.39□□□□□ -0.91
SHPRH-210ENST00000523276 TTC37Q6PGP7 1564 aa9.39□□□□□ -0.91
SHPRH-210ENST00000523276 CDC42BPBQ9Y5S2 1711 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms