RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CDC42BPBQ9Y5S2 1711 aa25.69■■□□□ 1.7
TNPO1-212ENST00000520850 PREX2Q70Z35 1606 aa25.69■■□□□ 1.7
TNPO1-212ENST00000520850 ARHGAP5Q13017 1502 aa25.68■■□□□ 1.7
TNPO1-212ENST00000520850 ADGRL1O94910 1474 aa25.68■■□□□ 1.7
TNPO1-212ENST00000520850 SCAPERQ9BY12 1400 aa25.68■■□□□ 1.7
TNPO1-212ENST00000520850 LRRC9Q6ZRR7 1453 aa25.66■■□□□ 1.7
TNPO1-212ENST00000520850 CDC42BPAQ5VT25 1732 aa25.66■■□□□ 1.7
TNPO1-212ENST00000520850 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
TNPO1-212ENST00000520850 RICTORQ6R327 1708 aa25.64■■□□□ 1.7
TNPO1-212ENST00000520850 FRMPD1Q5SYB0 1578 aa25.64■■□□□ 1.69
TNPO1-212ENST00000520850 MAGI2Q86UL8 1455 aa25.63■■□□□ 1.69
TNPO1-212ENST00000520850 APLP2Q06481 763 aa25.62■■□□□ 1.69
TNPO1-212ENST00000520850 POGZQ7Z3K3 1410 aa25.62■■□□□ 1.69
TNPO1-212ENST00000520850 CFDP1Q9UEE9 299 aaPredicted RBP25.61■■□□□ 1.69
TNPO1-212ENST00000520850 ZMYM4Q5VZL5 1548 aa25.61■■□□□ 1.69
TNPO1-212ENST00000520850 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
TNPO1-212ENST00000520850 KIAA1107Q9UPP5 1409 aa25.58■■□□□ 1.69
TNPO1-212ENST00000520850 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
TNPO1-212ENST00000520850 ZNF518AQ6AHZ1 1483 aa25.58■■□□□ 1.69
TNPO1-212ENST00000520850 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
TNPO1-212ENST00000520850 PLEKHH2Q8IVE3 1493 aa25.56■■□□□ 1.68
TNPO1-212ENST00000520850 ABCC1P33527 1531 aa25.55■■□□□ 1.68
TNPO1-212ENST00000520850 ITSN2Q9NZM3 1697 aa25.53■■□□□ 1.68
TNPO1-212ENST00000520850 KDM5CP41229 1560 aa25.52■■□□□ 1.68
TNPO1-212ENST00000520850 AFAP1Q8N556 730 aa25.52■■□□□ 1.68
TNPO1-212ENST00000520850 ARHGEF12Q9NZN5 1544 aa25.52■■□□□ 1.68
TNPO1-212ENST00000520850 SAMD9LQ8IVG5 1584 aa25.51■■□□□ 1.67
TNPO1-212ENST00000520850 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
TNPO1-212ENST00000520850 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
TNPO1-212ENST00000520850 KDM4FA0A1W2PPD8 638 aa25.48■■□□□ 1.67
TNPO1-212ENST00000520850 ARHGEF40Q8TER5 1519 aa25.47■■□□□ 1.67
TNPO1-212ENST00000520850 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
TNPO1-212ENST00000520850 RSPH4AQ5TD94 716 aa25.47■■□□□ 1.67
TNPO1-212ENST00000520850 ZFYVE16Q7Z3T8 1539 aa25.47■■□□□ 1.67
TNPO1-212ENST00000520850 HNRNPMP52272 730 aaKnown RBP eCLIP25.44■■□□□ 1.669e-6■■■■□ 22.2
TNPO1-212ENST00000520850 MIA2Q96PC5 1412 aa25.44■■□□□ 1.66
TNPO1-212ENST00000520850 ATP10AO60312 1499 aa25.43■■□□□ 1.66
TNPO1-212ENST00000520850 YEATS2Q9ULM3 1422 aa25.43■■□□□ 1.66
TNPO1-212ENST00000520850 MBD5Q9P267 1494 aa25.41■■□□□ 1.66
TNPO1-212ENST00000520850 SYCP2Q9BX26 1530 aa25.41■■□□□ 1.66
TNPO1-212ENST00000520850 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
TNPO1-212ENST00000520850 HECW2Q9P2P5 1572 aa25.4■■□□□ 1.66
TNPO1-212ENST00000520850 MYOM3Q5VTT5 1437 aa25.4■■□□□ 1.66
TNPO1-212ENST00000520850 C9orf84Q5VXU9 1444 aa25.37■■□□□ 1.65
TNPO1-212ENST00000520850 SPAG9O60271 1321 aaKnown RBP25.36■■□□□ 1.65
TNPO1-212ENST00000520850 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
TNPO1-212ENST00000520850 RTEL1-TNFRSF6BF6WH68 1400 aa25.34■■□□□ 1.65
TNPO1-212ENST00000520850 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
TNPO1-212ENST00000520850 KIDINS220Q9ULH0 1771 aa25.33■■□□□ 1.65
TNPO1-212ENST00000520850 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
TNPO1-212ENST00000520850 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
TNPO1-212ENST00000520850 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
TNPO1-212ENST00000520850 DIP2CQ9Y2E4 1556 aa25.31■■□□□ 1.64
TNPO1-212ENST00000520850 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
TNPO1-212ENST00000520850 ADAMTSL3P82987 1691 aa25.29■■□□□ 1.64
TNPO1-212ENST00000520850 BCORL1Q5H9F3 1711 aa25.29■■□□□ 1.64
TNPO1-212ENST00000520850 AGLP35573 1532 aa25.27■■□□□ 1.64
TNPO1-212ENST00000520850 ATP7AQ04656 1500 aa25.27■■□□□ 1.64
TNPO1-212ENST00000520850 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
TNPO1-212ENST00000520850 ABCA6Q8N139 1617 aa25.26■■□□□ 1.63
TNPO1-212ENST00000520850 TSPY4P0CV99 314 aa25.26■■□□□ 1.63
TNPO1-212ENST00000520850 TSPY10P0CW01 314 aa25.26■■□□□ 1.63
TNPO1-212ENST00000520850 FGD6Q6ZV73 1430 aa25.24■■□□□ 1.63
TNPO1-212ENST00000520850 SIGLEC1Q9BZZ2 1709 aa25.23■■□□□ 1.63
TNPO1-212ENST00000520850 TCOF1Q13428 1488 aaKnown RBP25.22■■□□□ 1.63
TNPO1-212ENST00000520850 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
TNPO1-212ENST00000520850 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
TNPO1-212ENST00000520850 A2MP01023 1474 aa25.17■■□□□ 1.62
TNPO1-212ENST00000520850 ADGBQ8N7X0 1667 aa25.17■■□□□ 1.62
TNPO1-212ENST00000520850 DHX29Q7Z478 1369 aaKnown RBP25.16■■□□□ 1.62
TNPO1-212ENST00000520850 PLXNC1O60486 1568 aa25.15■■□□□ 1.62
TNPO1-212ENST00000520850 PPP6R1Q9UPN7 881 aa25.14■■□□□ 1.62
TNPO1-212ENST00000520850 PTPRMP28827 1452 aa25.14■■□□□ 1.61
TNPO1-212ENST00000520850 MADDQ8WXG6 1647 aa25.12■■□□□ 1.61
TNPO1-212ENST00000520850 ABCC5O15440 1437 aa25.12■■□□□ 1.61
TNPO1-212ENST00000520850 SHANK2Q9UPX8 1470 aa25.11■■□□□ 1.61
TNPO1-212ENST00000520850 MLECQ14165 292 aa25.11■■□□□ 1.61
TNPO1-212ENST00000520850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.08■■□□□ 1.61
TNPO1-212ENST00000520850 DAPK1P53355 1430 aa25.08■■□□□ 1.61
TNPO1-212ENST00000520850 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.6
TNPO1-212ENST00000520850 FER1L4A9Z1Z3 1794 aa25.05■■□□□ 1.6
TNPO1-212ENST00000520850 CNTLNQ9NXG0 1405 aa25.04■■□□□ 1.6
TNPO1-212ENST00000520850 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
TNPO1-212ENST00000520850 CROCC2H7BZ55 1655 aa25.02■■□□□ 1.6
TNPO1-212ENST00000520850 FAM50AQ14320 339 aaKnown RBP25.01■■□□□ 1.59
TNPO1-212ENST00000520850 ESF1Q9H501 851 aaKnown RBP25.01■■□□□ 1.59
TNPO1-212ENST00000520850 DUOX2Q9NRD8 1548 aa24.98■■□□□ 1.59
TNPO1-212ENST00000520850 ANKRD30AQ9BXX3 1397 aa24.98■■□□□ 1.59
TNPO1-212ENST00000520850 KIF3BO15066 747 aa24.98■■□□□ 1.59
TNPO1-212ENST00000520850 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
TNPO1-212ENST00000520850 FAM135AQ9P2D6 1515 aa24.97■■□□□ 1.59
TNPO1-212ENST00000520850 NCOA1Q15788 1441 aa24.97■■□□□ 1.59
TNPO1-212ENST00000520850 GGT6Q6P531 493 aa24.97■■□□□ 1.59
TNPO1-212ENST00000520850 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
TNPO1-212ENST00000520850 RRBP1Q9P2E9 1410 aaKnown RBP24.95■■□□□ 1.59
TNPO1-212ENST00000520850 KIF15Q9NS87 1388 aa24.95■■□□□ 1.59
TNPO1-212ENST00000520850 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
TNPO1-212ENST00000520850 MROH2AA6NES4 1674 aa24.93■■□□□ 1.58
TNPO1-212ENST00000520850 ERBINQ96RT1 1412 aa24.93■■□□□ 1.58
TNPO1-212ENST00000520850 RRP7BPQ9NSQ0 103 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms