RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
SPARC-202ENST00000520687 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
SPARC-202ENST00000520687 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
SPARC-202ENST00000520687 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.08
SPARC-202ENST00000520687 UHRF1BP1LA0JNW5 1464 aa14.58□□□□□ -0.08
SPARC-202ENST00000520687 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
SPARC-202ENST00000520687 ITGAEP38570 1179 aa14.56□□□□□ -0.08
SPARC-202ENST00000520687 MIA2Q96PC5 1412 aa14.56□□□□□ -0.08
SPARC-202ENST00000520687 TIMELESSQ9UNS1 1208 aa14.56□□□□□ -0.08
SPARC-202ENST00000520687 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
SPARC-202ENST00000520687 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
SPARC-202ENST00000520687 TCOF1Q13428 1488 aaKnown RBP14.53□□□□□ -0.08
SPARC-202ENST00000520687 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.09
SPARC-202ENST00000520687 HSPA2P54652 639 aa14.51□□□□□ -0.09
SPARC-202ENST00000520687 KDM5BQ9UGL1 1544 aa14.5□□□□□ -0.09
SPARC-202ENST00000520687 HFM1A2PYH4 1435 aa14.5□□□□□ -0.09
SPARC-202ENST00000520687 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
SPARC-202ENST00000520687 MADDQ8WXG6 1647 aa14.49□□□□□ -0.09
SPARC-202ENST00000520687 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
SPARC-202ENST00000520687 BCORL1Q5H9F3 1711 aa14.48□□□□□ -0.09
SPARC-202ENST00000520687 NUP153P49790 1475 aaKnown RBP14.47□□□□□ -0.09
SPARC-202ENST00000520687 PTPN23Q9H3S7 1636 aa14.47□□□□□ -0.09
SPARC-202ENST00000520687 CD109Q6YHK3 1445 aa14.46□□□□□ -0.09
SPARC-202ENST00000520687 ABCA8O94911 1581 aa14.45□□□□□ -0.1
SPARC-202ENST00000520687 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
SPARC-202ENST00000520687 WDR7Q9Y4E6 1490 aa14.45□□□□□ -0.1
SPARC-202ENST00000520687 CDK13Q14004 1512 aaKnown RBP14.44□□□□□ -0.1
SPARC-202ENST00000520687 ARAP3Q8WWN8 1544 aa14.43□□□□□ -0.1
SPARC-202ENST00000520687 TROQ12816 1431 aaPredicted RBP14.43□□□□□ -0.1
SPARC-202ENST00000520687 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
SPARC-202ENST00000520687 NAIPQ13075 1403 aa14.41□□□□□ -0.1
SPARC-202ENST00000520687 RIMS1Q86UR5 1692 aaKnown RBP14.41□□□□□ -0.1
SPARC-202ENST00000520687 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
SPARC-202ENST00000520687 PTPRKQ15262 1439 aa14.4□□□□□ -0.1
SPARC-202ENST00000520687 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
SPARC-202ENST00000520687 IQSEC2Q5JU85 1478 aa14.37□□□□□ -0.11
SPARC-202ENST00000520687 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
SPARC-202ENST00000520687 PLEKHD1A6NEE1 506 aa14.35□□□□□ -0.11
SPARC-202ENST00000520687 YEATS2Q9ULM3 1422 aa14.35□□□□□ -0.11
SPARC-202ENST00000520687 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
SPARC-202ENST00000520687 GCC2Q8IWJ2 1684 aa14.32□□□□□ -0.12
SPARC-202ENST00000520687 DAPK1P53355 1430 aa14.32□□□□□ -0.12
SPARC-202ENST00000520687 KIF14Q15058 1648 aa14.31□□□□□ -0.12
SPARC-202ENST00000520687 CFDP1Q9UEE9 299 aaPredicted RBP14.3□□□□□ -0.12
SPARC-202ENST00000520687 DNMT1P26358 1616 aaKnown RBP14.3□□□□□ -0.12
SPARC-202ENST00000520687 ATP10BO94823 1461 aa14.3□□□□□ -0.12
SPARC-202ENST00000520687 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
SPARC-202ENST00000520687 GPATCH8Q9UKJ3 1502 aaKnown RBP14.29□□□□□ -0.12
SPARC-202ENST00000520687 ABCC5O15440 1437 aa14.29□□□□□ -0.12
SPARC-202ENST00000520687 POGZQ7Z3K3 1410 aa14.29□□□□□ -0.12
SPARC-202ENST00000520687 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
SPARC-202ENST00000520687 ARID3CA6NKF2 412 aa14.28□□□□□ -0.12
SPARC-202ENST00000520687 CENPBP07199 599 aaPredicted RBP14.28□□□□□ -0.12
SPARC-202ENST00000520687 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
SPARC-202ENST00000520687 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.12
SPARC-202ENST00000520687 PREX1Q8TCU6 1659 aa14.27□□□□□ -0.12
SPARC-202ENST00000520687 SENP3Q9H4L4 574 aaPredicted RBP14.26□□□□□ -0.13
SPARC-202ENST00000520687 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
SPARC-202ENST00000520687 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
SPARC-202ENST00000520687 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
SPARC-202ENST00000520687 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
SPARC-202ENST00000520687 STRCQ7RTU9 1775 aa14.25□□□□□ -0.13
SPARC-202ENST00000520687 PTPRTO14522 1441 aa14.25□□□□□ -0.13
SPARC-202ENST00000520687 ADGRL2O95490 1459 aa14.25□□□□□ -0.13
SPARC-202ENST00000520687 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
SPARC-202ENST00000520687 CDC42BPAQ5VT25 1732 aa14.25□□□□□ -0.13
SPARC-202ENST00000520687 MED1Q15648 1581 aaPredicted RBP14.24□□□□□ -0.13
SPARC-202ENST00000520687 ARHGEF40Q8TER5 1519 aa14.24□□□□□ -0.13
SPARC-202ENST00000520687 RAPGEF3O95398 923 aa14.24□□□□□ -0.13
SPARC-202ENST00000520687 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
SPARC-202ENST00000520687 CHIC2Q9UKJ5 165 aa14.24□□□□□ -0.13
SPARC-202ENST00000520687 FANCAO15360 1455 aa14.23□□□□□ -0.13
SPARC-202ENST00000520687 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
SPARC-202ENST00000520687 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
SPARC-202ENST00000520687 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
SPARC-202ENST00000520687 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
SPARC-202ENST00000520687 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
SPARC-202ENST00000520687 NEO1Q92859 1461 aa14.21□□□□□ -0.13
SPARC-202ENST00000520687 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.14
SPARC-202ENST00000520687 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
SPARC-202ENST00000520687 CROCC2H7BZ55 1655 aa14.2□□□□□ -0.14
SPARC-202ENST00000520687 PREX2Q70Z35 1606 aa14.2□□□□□ -0.14
SPARC-202ENST00000520687 FRMPD1Q5SYB0 1578 aa14.19□□□□□ -0.14
SPARC-202ENST00000520687 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
SPARC-202ENST00000520687 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
SPARC-202ENST00000520687 MIER1Q8N108 512 aa14.18□□□□□ -0.14
SPARC-202ENST00000520687 FER1L4A9Z1Z3 1794 aa14.18□□□□□ -0.14
SPARC-202ENST00000520687 UBAP1LF5GYI3 381 aa14.17□□□□□ -0.14
SPARC-202ENST00000520687 TSPY4P0CV99 314 aa14.17□□□□□ -0.14
SPARC-202ENST00000520687 TSPY10P0CW01 314 aa14.17□□□□□ -0.14
SPARC-202ENST00000520687 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
SPARC-202ENST00000520687 MYO5CQ9NQX4 1742 aa14.16□□□□□ -0.14
SPARC-202ENST00000520687 ARHGEF5Q12774 1597 aa14.16□□□□□ -0.14
SPARC-202ENST00000520687 UHRF1BP1Q6BDS2 1440 aa14.16□□□□□ -0.14
SPARC-202ENST00000520687 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.15
SPARC-202ENST00000520687 CDC42BPBQ9Y5S2 1711 aa14.14□□□□□ -0.15
SPARC-202ENST00000520687 PLEKHH2Q8IVE3 1493 aa14.14□□□□□ -0.15
SPARC-202ENST00000520687 ANKRD30BQ9BXX2 1392 aa14.13□□□□□ -0.15
SPARC-202ENST00000520687 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
SPARC-202ENST00000520687 DENND4BO75064 1496 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms