RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZMYM4	Q5VZL5	1548 aa		38.54	■■■■□ 3.76
CNOT7-204	ENST00000518885	POGZ	Q7Z3K3	1410 aa		38.54	■■■■□ 3.76
CNOT7-204	ENST00000518885	MAGI2	Q86UL8	1455 aa		38.54	■■■■□ 3.76
CNOT7-204	ENST00000518885	MTUS2	Q5JR59	1369 aa		38.52	■■■■□ 3.76
CNOT7-204	ENST00000518885	PREX2	Q70Z35	1606 aa		38.5	■■■■□ 3.75
CNOT7-204	ENST00000518885	ARHGEF40	Q8TER5	1519 aa		38.5	■■■■□ 3.75
CNOT7-204	ENST00000518885	ZFYVE16	Q7Z3T8	1539 aa		38.45	■■■■□ 3.75
CNOT7-204	ENST00000518885	ZNF518A	Q6AHZ1	1483 aa		38.45	■■■■□ 3.75
CNOT7-204	ENST00000518885	CDC42BPB	Q9Y5S2	1711 aa		38.44	■■■■□ 3.74
CNOT7-204	ENST00000518885	ARID4B	Q4LE39	1312 aa	Predicted RBP	38.42	■■■■□ 3.74
CNOT7-204	ENST00000518885	EHBP1L1	Q8N3D4	1523 aa		38.4	■■■■□ 3.74
CNOT7-204	ENST00000518885	VPS8	Q8N3P4	1428 aa		38.39	■■■■□ 3.74
CNOT7-204	ENST00000518885	CDC42BPA	Q5VT25	1732 aa		38.38	■■■■□ 3.73
CNOT7-204	ENST00000518885	CCNB3	Q8WWL7	1395 aa		38.37	■■■■□ 3.73
CNOT7-204	ENST00000518885	GPATCH8	Q9UKJ3	1502 aa	Known RBP	38.33	■■■■□ 3.73
CNOT7-204	ENST00000518885	ABCC1	P33527	1531 aa		38.33	■■■■□ 3.73
CNOT7-204	ENST00000518885	YEATS2	Q9ULM3	1422 aa		38.31	■■■■□ 3.72
CNOT7-204	ENST00000518885	MYT1L	Q9UL68	1186 aa		38.3	■■■■□ 3.72
CNOT7-204	ENST00000518885	KDM5C	P41229	1560 aa		38.3	■■■■□ 3.72
CNOT7-204	ENST00000518885	CFDP1	Q9UEE9	299 aa	Predicted RBP	38.29	■■■■□ 3.72
CNOT7-204	ENST00000518885	ZNF777	Q9ULD5	760 aa	Predicted RBP	38.28	■■■■□ 3.72
CNOT7-204	ENST00000518885	AFAP1	Q8N556	730 aa		38.27	■■■■□ 3.72
CNOT7-204	ENST00000518885	ATP10A	O60312	1499 aa		38.26	■■■■□ 3.72
CNOT7-204	ENST00000518885	PLEKHH2	Q8IVE3	1493 aa		38.26	■■■■□ 3.72
CNOT7-204	ENST00000518885	BCORL1	Q5H9F3	1711 aa		38.26	■■■■□ 3.71
CNOT7-204	ENST00000518885	ITSN2	Q9NZM3	1697 aa		38.24	■■■■□ 3.71
CNOT7-204	ENST00000518885	TIAM1	Q13009	1591 aa		38.24	■■■■□ 3.71
CNOT7-204	ENST00000518885	HECW2	Q9P2P5	1572 aa		38.24	■■■■□ 3.71
CNOT7-204	ENST00000518885	ADAMTSL3	P82987	1691 aa		38.23	■■■■□ 3.71
CNOT7-204	ENST00000518885	C9orf84	Q5VXU9	1444 aa		38.22	■■■■□ 3.71
CNOT7-204	ENST00000518885	MLH3	Q9UHC1	1453 aa		38.21	■■■■□ 3.71
CNOT7-204	ENST00000518885	SAMD9L	Q8IVG5	1584 aa		38.19	■■■■□ 3.7
CNOT7-204	ENST00000518885	SUPT6H	Q7KZ85	1726 aa	Known RBP	38.18	■■■■□ 3.7
CNOT7-204	ENST00000518885	ARHGEF12	Q9NZN5	1544 aa		38.18	■■■■□ 3.7
CNOT7-204	ENST00000518885	TRAPPC8	Q9Y2L5	1435 aa		38.18	■■■■□ 3.7
CNOT7-204	ENST00000518885	KIAA1107	Q9UPP5	1409 aa		38.17	■■■■□ 3.7
CNOT7-204	ENST00000518885	MAP3K1	Q13233	1512 aa		38.15	■■■■□ 3.7
CNOT7-204	ENST00000518885	SYCP2	Q9BX26	1530 aa		38.13	■■■■□ 3.69
CNOT7-204	ENST00000518885	PTPRM	P28827	1452 aa		38.12	■■■■□ 3.69
CNOT7-204	ENST00000518885	MADD	Q8WXG6	1647 aa		38.11	■■■■□ 3.69
CNOT7-204	ENST00000518885	NCOA2	Q15596	1464 aa		38.1	■■■■□ 3.69
CNOT7-204	ENST00000518885	LRRC9	Q6ZRR7	1453 aa		38.09	■■■■□ 3.69
CNOT7-204	ENST00000518885	APLP2	Q06481	763 aa		38.09	■■■■□ 3.69
CNOT7-204	ENST00000518885	DIP2C	Q9Y2E4	1556 aa		38.08	■■■■□ 3.69
CNOT7-204	ENST00000518885	RERE	Q9P2R6	1566 aa		38.07	■■■■□ 3.69
CNOT7-204	ENST00000518885	HNRNPM	P52272	730 aa	Known RBP eCLIP	38.07	■■■■□ 3.68
CNOT7-204	ENST00000518885	SPAG9	O60271	1321 aa	Known RBP	38.06	■■■■□ 3.68
CNOT7-204	ENST00000518885	MLEC	Q14165	292 aa		38.03	■■■■□ 3.68
CNOT7-204	ENST00000518885	ABCA6	Q8N139	1617 aa		38.02	■■■■□ 3.68
CNOT7-204	ENST00000518885	SIGLEC1	Q9BZZ2	1709 aa		38.02	■■■■□ 3.68
CNOT7-204	ENST00000518885	RIMS1	Q86UR5	1692 aa	Known RBP	37.99	■■■■□ 3.67
CNOT7-204	ENST00000518885	KIDINS220	Q9ULH0	1771 aa		37.98	■■■■□ 3.67
CNOT7-204	ENST00000518885	AGL	P35573	1532 aa		37.94	■■■■□ 3.66
CNOT7-204	ENST00000518885	ATP7A	Q04656	1500 aa		37.94	■■■■□ 3.66
CNOT7-204	ENST00000518885	FER1L4	A9Z1Z3	1794 aa		37.93	■■■■□ 3.66
CNOT7-204	ENST00000518885	ZNF644	Q9H582	1327 aa	Predicted RBP	37.92	■■■■□ 3.66
CNOT7-204	ENST00000518885	RSPH4A	Q5TD94	716 aa		37.92	■■■■□ 3.66
CNOT7-204	ENST00000518885	CAMSAP2	Q08AD1	1489 aa		37.9	■■■■□ 3.66
CNOT7-204	ENST00000518885	INO80	Q9ULG1	1556 aa	Predicted RBP	37.89	■■■■□ 3.66
CNOT7-204	ENST00000518885	MBD5	Q9P267	1494 aa		37.89	■■■■□ 3.66
CNOT7-204	ENST00000518885	KANK4	Q5T7N3	995 aa	Predicted RBP	37.88	■■■■□ 3.65
CNOT7-204	ENST00000518885	ESF1	Q9H501	851 aa	Known RBP	37.86	■■■■□ 3.65
CNOT7-204	ENST00000518885	CCDC141	Q6ZP82	1450 aa		37.84	■■■■□ 3.65
CNOT7-204	ENST00000518885	RTEL1-TNFRSF6B	F6WH68	1400 aa		37.83	■■■■□ 3.65
CNOT7-204	ENST00000518885	MIA2	Q96PC5	1412 aa		37.8	■■■■□ 3.64
CNOT7-204	ENST00000518885	MYOM3	Q5VTT5	1437 aa		37.79	■■■■□ 3.64
CNOT7-204	ENST00000518885	A2M	P01023	1474 aa		37.79	■■■■□ 3.64
CNOT7-204	ENST00000518885	PLPPR3	Q6T4P5	718 aa		37.77	■■■■□ 3.64
CNOT7-204	ENST00000518885	ADGB	Q8N7X0	1667 aa		37.76	■■■■□ 3.64
CNOT7-204	ENST00000518885	ARHGEF5	Q12774	1597 aa		37.76	■■■■□ 3.63
CNOT7-204	ENST00000518885	TSPY4	P0CV99	314 aa		37.75	■■■■□ 3.63
CNOT7-204	ENST00000518885	TSPY10	P0CW01	314 aa		37.75	■■■■□ 3.63
CNOT7-204	ENST00000518885	CNTLN	Q9NXG0	1405 aa		37.73	■■■■□ 3.63
CNOT7-204	ENST00000518885	PLXNC1	O60486	1568 aa		37.72	■■■■□ 3.63
CNOT7-204	ENST00000518885	LMTK3	Q96Q04	1460 aa		37.64	■■■■□ 3.62
CNOT7-204	ENST00000518885	DHX29	Q7Z478	1369 aa	Known RBP	37.63	■■■■□ 3.61
CNOT7-204	ENST00000518885	PPP6R1	Q9UPN7	881 aa		37.61	■■■■□ 3.61
CNOT7-204	ENST00000518885	CEBPA	P49715	358 aa	Predicted RBP	37.58	■■■■□ 3.61
CNOT7-204	ENST00000518885	GGT6	Q6P531	493 aa		37.56	■■■■□ 3.6
CNOT7-204	ENST00000518885	MAST1	Q9Y2H9	1570 aa		37.55	■■■■□ 3.6
CNOT7-204	ENST00000518885	MROH2A	A6NES4	1674 aa		37.55	■■■■□ 3.6
CNOT7-204	ENST00000518885	PREX1	Q8TCU6	1659 aa		37.54	■■■■□ 3.6
CNOT7-204	ENST00000518885	C3	P01024	1663 aa		37.53	■■■■□ 3.6
CNOT7-204	ENST00000518885	PTPN23	Q9H3S7	1636 aa		37.52	■■■■□ 3.6
CNOT7-204	ENST00000518885	FGD6	Q6ZV73	1430 aa		37.52	■■■■□ 3.6
CNOT7-204	ENST00000518885	UHRF1BP1	Q6BDS2	1440 aa		37.5	■■■■□ 3.59
CNOT7-204	ENST00000518885	KIF3B	O15066	747 aa		37.47	■■■■□ 3.59
CNOT7-204	ENST00000518885	ZMYM3	Q14202	1370 aa		37.46	■■■■□ 3.59
CNOT7-204	ENST00000518885	SETD1B	Q9UPS6	1966 aa	Known RBP	37.45	■■■■□ 3.59
CNOT7-204	ENST00000518885	TCOF1	Q13428	1488 aa	Known RBP	37.45	■■■■□ 3.59
CNOT7-204	ENST00000518885	FAM135A	Q9P2D6	1515 aa		37.44	■■■■□ 3.58
CNOT7-204	ENST00000518885	SHANK2	Q9UPX8	1470 aa		37.44	■■■■□ 3.58
CNOT7-204	ENST00000518885	NPAT	Q14207	1427 aa		37.44	■■■■□ 3.58
CNOT7-204	ENST00000518885	CLTC	Q00610	1675 aa	Known RBP	37.44	■■■■□ 3.58
CNOT7-204	ENST00000518885	HSPA2	P54652	639 aa		37.4	■■■■□ 3.58
CNOT7-204	ENST00000518885	CROCC2	H7BZ55	1655 aa		37.37	■■■■□ 3.57
CNOT7-204	ENST00000518885	ABCC5	O15440	1437 aa		37.36	■■■■□ 3.57
CNOT7-204	ENST00000518885	DNMT1	P26358	1616 aa	Known RBP	37.36	■■■■□ 3.57
CNOT7-204	ENST00000518885	DAPK1	P53355	1430 aa		37.36	■■■■□ 3.57
CNOT7-204	ENST00000518885	KDM5D	Q9BY66	1539 aa		37.34	■■■■□ 3.57

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms