RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
PCDHGA11-202ENST00000518882 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
PCDHGA11-202ENST00000518882 ANKRD30BQ9BXX2 1392 aa22.97■■□□□ 1.27
PCDHGA11-202ENST00000518882 CCDC7Q96M83 1385 aa22.96■■□□□ 1.27
PCDHGA11-202ENST00000518882 RPRD2Q5VT52 1461 aaKnown RBP22.96■■□□□ 1.27
PCDHGA11-202ENST00000518882 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
PCDHGA11-202ENST00000518882 NBPF8Q3BBV2 869 aa22.95■■□□□ 1.26
PCDHGA11-202ENST00000518882 ABCC5O15440 1437 aa22.95■■□□□ 1.26
PCDHGA11-202ENST00000518882 ROCK1Q13464 1354 aa22.94■■□□□ 1.26
PCDHGA11-202ENST00000518882 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
PCDHGA11-202ENST00000518882 POLR1AO95602 1720 aaPredicted RBP22.92■■□□□ 1.26
PCDHGA11-202ENST00000518882 PRKRIP1Q9H875 184 aaPredicted RBP22.92■■□□□ 1.26
PCDHGA11-202ENST00000518882 KIAA0556O60303 1618 aa22.91■■□□□ 1.26
PCDHGA11-202ENST00000518882 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
PCDHGA11-202ENST00000518882 NUP153P49790 1475 aaKnown RBP22.9■■□□□ 1.26
PCDHGA11-202ENST00000518882 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
PCDHGA11-202ENST00000518882 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
PCDHGA11-202ENST00000518882 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
PCDHGA11-202ENST00000518882 RAPGEF6Q8TEU7 1601 aa22.86■■□□□ 1.25
PCDHGA11-202ENST00000518882 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
PCDHGA11-202ENST00000518882 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
PCDHGA11-202ENST00000518882 KIF7Q2M1P5 1343 aa22.84■■□□□ 1.25
PCDHGA11-202ENST00000518882 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
PCDHGA11-202ENST00000518882 MRS2Q9HD23 443 aa22.83■■□□□ 1.25
PCDHGA11-202ENST00000518882 PZPP20742 1482 aa22.81■■□□□ 1.24
PCDHGA11-202ENST00000518882 MSH5O43196 834 aa22.81■■□□□ 1.24
PCDHGA11-202ENST00000518882 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
PCDHGA11-202ENST00000518882 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
PCDHGA11-202ENST00000518882 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
PCDHGA11-202ENST00000518882 ADGBQ8N7X0 1667 aa22.77■■□□□ 1.24
PCDHGA11-202ENST00000518882 PRG4Q92954 1404 aaPredicted RBP22.77■■□□□ 1.23
PCDHGA11-202ENST00000518882 ERICH6BQ5W0A0 696 aa22.77■■□□□ 1.23
PCDHGA11-202ENST00000518882 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
PCDHGA11-202ENST00000518882 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
PCDHGA11-202ENST00000518882 MBD5Q9P267 1494 aa22.74■■□□□ 1.23
PCDHGA11-202ENST00000518882 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
PCDHGA11-202ENST00000518882 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
PCDHGA11-202ENST00000518882 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
PCDHGA11-202ENST00000518882 TROQ12816 1431 aaPredicted RBP22.73■■□□□ 1.23
PCDHGA11-202ENST00000518882 KIF14Q15058 1648 aa22.73■■□□□ 1.23
PCDHGA11-202ENST00000518882 CROCC2H7BZ55 1655 aa22.73■■□□□ 1.23
PCDHGA11-202ENST00000518882 FANCIQ9NVI1 1328 aa22.71■■□□□ 1.23
PCDHGA11-202ENST00000518882 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
PCDHGA11-202ENST00000518882 GPATCH8Q9UKJ3 1502 aaKnown RBP22.7■■□□□ 1.22
PCDHGA11-202ENST00000518882 DHX29Q7Z478 1369 aaKnown RBP22.69■■□□□ 1.22
PCDHGA11-202ENST00000518882 CFDP1Q9UEE9 299 aaPredicted RBP22.69■■□□□ 1.22
PCDHGA11-202ENST00000518882 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
PCDHGA11-202ENST00000518882 KIAA1107Q9UPP5 1409 aa22.68■■□□□ 1.22
PCDHGA11-202ENST00000518882 ADCY10Q96PN6 1610 aa22.68■■□□□ 1.22
PCDHGA11-202ENST00000518882 ADGRL2O95490 1459 aa22.67■■□□□ 1.22
PCDHGA11-202ENST00000518882 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
PCDHGA11-202ENST00000518882 USP47Q96K76 1375 aa22.65■■□□□ 1.22
PCDHGA11-202ENST00000518882 KDM5CP41229 1560 aa22.65■■□□□ 1.22
PCDHGA11-202ENST00000518882 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
PCDHGA11-202ENST00000518882 ZNF326Q5BKZ1 582 aaKnown RBP22.64■■□□□ 1.21
PCDHGA11-202ENST00000518882 PKD2Q13563 968 aa22.63■■□□□ 1.21
PCDHGA11-202ENST00000518882 CNGB1Q14028 1251 aaPredicted RBP22.63■■□□□ 1.21
PCDHGA11-202ENST00000518882 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
PCDHGA11-202ENST00000518882 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
PCDHGA11-202ENST00000518882 CDC42BPAQ5VT25 1732 aa22.58■■□□□ 1.21
PCDHGA11-202ENST00000518882 ANKRD30AQ9BXX3 1397 aa22.58■■□□□ 1.21
PCDHGA11-202ENST00000518882 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.2
PCDHGA11-202ENST00000518882 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
PCDHGA11-202ENST00000518882 UHRF1BP1Q6BDS2 1440 aa22.54■■□□□ 1.2
PCDHGA11-202ENST00000518882 RALGAPBQ86X10 1494 aa22.53■■□□□ 1.2
PCDHGA11-202ENST00000518882 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
PCDHGA11-202ENST00000518882 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
PCDHGA11-202ENST00000518882 SYNJ2O15056 1496 aa22.51■■□□□ 1.19
PCDHGA11-202ENST00000518882 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
PCDHGA11-202ENST00000518882 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
PCDHGA11-202ENST00000518882 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
PCDHGA11-202ENST00000518882 NUP155O75694 1391 aa22.5■■□□□ 1.19
PCDHGA11-202ENST00000518882 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
PCDHGA11-202ENST00000518882 ABCC10Q5T3U5 1492 aa22.48■■□□□ 1.19
PCDHGA11-202ENST00000518882 RNF123Q5XPI4 1314 aa22.48■■□□□ 1.19
PCDHGA11-202ENST00000518882 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
PCDHGA11-202ENST00000518882 ARHGEF12Q9NZN5 1544 aa22.47■■□□□ 1.19
PCDHGA11-202ENST00000518882 CARMIL2Q6F5E8 1435 aa22.47■■□□□ 1.19
PCDHGA11-202ENST00000518882 PNISRQ8TF01 805 aaKnown RBP22.47■■□□□ 1.19
PCDHGA11-202ENST00000518882 FBLN2P98095 1184 aa22.46■■□□□ 1.19
PCDHGA11-202ENST00000518882 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
PCDHGA11-202ENST00000518882 KDM5DQ9BY66 1539 aa22.46■■□□□ 1.19
PCDHGA11-202ENST00000518882 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
PCDHGA11-202ENST00000518882 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
PCDHGA11-202ENST00000518882 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
PCDHGA11-202ENST00000518882 ABCA8O94911 1581 aa22.45■■□□□ 1.18
PCDHGA11-202ENST00000518882 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
PCDHGA11-202ENST00000518882 NUP160Q12769 1436 aa22.43■■□□□ 1.18
PCDHGA11-202ENST00000518882 ATP10BO94823 1461 aa22.43■■□□□ 1.18
PCDHGA11-202ENST00000518882 E9PCH4 1651 aa22.42■■□□□ 1.18
PCDHGA11-202ENST00000518882 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
PCDHGA11-202ENST00000518882 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
PCDHGA11-202ENST00000518882 ST20-MTHFSA0A0A6YYL1 179 aa22.41■■□□□ 1.18
PCDHGA11-202ENST00000518882 TMC1Q8TDI8 760 aa22.41■■□□□ 1.18
PCDHGA11-202ENST00000518882 KIF15Q9NS87 1388 aa22.4■■□□□ 1.18
PCDHGA11-202ENST00000518882 PTPRGP23470 1445 aa22.39■■□□□ 1.18
PCDHGA11-202ENST00000518882 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
PCDHGA11-202ENST00000518882 DCAF11Q8TEB1 546 aa22.37■■□□□ 1.17
PCDHGA11-202ENST00000518882 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
PCDHGA11-202ENST00000518882 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms