RNA–Protein interactions for RNA: ENST00000518879.5

FAM49B-209, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-209ENST00000518879 SCAPERQ9BY12 1400 aa30.21■■■□□ 2.43
FAM49B-209ENST00000518879 EFCAB2Q5VUJ9 269 aa30.19■■■□□ 2.42
FAM49B-209ENST00000518879 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
FAM49B-209ENST00000518879 RIMS1Q86UR5 1692 aaKnown RBP30.18■■■□□ 2.42
FAM49B-209ENST00000518879 LRRIQ1Q96JM4 1722 aa30.17■■■□□ 2.42
FAM49B-209ENST00000518879 ILDR1Q86SU0 546 aaPredicted RBP30.17■■■□□ 2.42
FAM49B-209ENST00000518879 YEATS2Q9ULM3 1422 aa30.15■■■□□ 2.42
FAM49B-209ENST00000518879 ARHGAP5Q13017 1502 aa30.14■■■□□ 2.42
FAM49B-209ENST00000518879 CCDC18Q5T9S5 1454 aa30.11■■■□□ 2.41
FAM49B-209ENST00000518879 PCF11O94913 1555 aaKnown RBP30.11■■■□□ 2.41
FAM49B-209ENST00000518879 CASKIN1Q8WXD9 1431 aa30.08■■■□□ 2.41
FAM49B-209ENST00000518879 SIGLEC1Q9BZZ2 1709 aa30.08■■■□□ 2.41
FAM49B-209ENST00000518879 ZNF518AQ6AHZ1 1483 aa30.06■■■□□ 2.4
FAM49B-209ENST00000518879 FER1L4A9Z1Z3 1794 aa30.05■■■□□ 2.4
FAM49B-209ENST00000518879 MLECQ14165 292 aa30.04■■■□□ 2.4
FAM49B-209ENST00000518879 PLPPR3Q6T4P5 718 aa30.04■■■□□ 2.4
FAM49B-209ENST00000518879 ATP10AO60312 1499 aa30.04■■■□□ 2.4
FAM49B-209ENST00000518879 C9orf84Q5VXU9 1444 aa30.04■■■□□ 2.4
FAM49B-209ENST00000518879 MYT1LQ9UL68 1186 aa30.02■■■□□ 2.4
FAM49B-209ENST00000518879 CDC42BPBQ9Y5S2 1711 aa30.02■■■□□ 2.4
FAM49B-209ENST00000518879 FYCO1Q9BQS8 1478 aa30■■■□□ 2.39
FAM49B-209ENST00000518879 PREX2Q70Z35 1606 aa30■■■□□ 2.39
FAM49B-209ENST00000518879 LMTK3Q96Q04 1460 aa29.99■■■□□ 2.39
FAM49B-209ENST00000518879 KDM5CP41229 1560 aa29.97■■■□□ 2.39
FAM49B-209ENST00000518879 AFAP1Q8N556 730 aa29.95■■■□□ 2.39
FAM49B-209ENST00000518879 ARHGEF12Q9NZN5 1544 aa29.91■■■□□ 2.38
FAM49B-209ENST00000518879 CDC42BPAQ5VT25 1732 aa29.91■■■□□ 2.38
FAM49B-209ENST00000518879 ABCC1P33527 1531 aa29.9■■■□□ 2.38
FAM49B-209ENST00000518879 ITSN2Q9NZM3 1697 aa29.89■■■□□ 2.38
FAM49B-209ENST00000518879 DIP2CQ9Y2E4 1556 aa29.87■■■□□ 2.37
FAM49B-209ENST00000518879 MLH3Q9UHC1 1453 aa29.85■■■□□ 2.37
FAM49B-209ENST00000518879 ABCA6Q8N139 1617 aa29.84■■■□□ 2.37
FAM49B-209ENST00000518879 REREQ9P2R6 1566 aa29.83■■■□□ 2.37
FAM49B-209ENST00000518879 HSPA2P54652 639 aa29.83■■■□□ 2.37
FAM49B-209ENST00000518879 TRAPPC8Q9Y2L5 1435 aa29.81■■■□□ 2.36
FAM49B-209ENST00000518879 PREX1Q8TCU6 1659 aa29.79■■■□□ 2.36
FAM49B-209ENST00000518879 ZNF777Q9ULD5 760 aaPredicted RBP29.79■■■□□ 2.36
FAM49B-209ENST00000518879 FBXO41Q8TF61 875 aa29.77■■■□□ 2.36
FAM49B-209ENST00000518879 ESF1Q9H501 851 aaKnown RBP29.75■■■□□ 2.35
FAM49B-209ENST00000518879 KIDINS220Q9ULH0 1771 aa29.75■■■□□ 2.35
FAM49B-209ENST00000518879 SAMD9LQ8IVG5 1584 aa29.73■■■□□ 2.35
FAM49B-209ENST00000518879 GPATCH8Q9UKJ3 1502 aaKnown RBP29.73■■■□□ 2.35
FAM49B-209ENST00000518879 CEBPAP49715 358 aaPredicted RBP29.73■■■□□ 2.35
FAM49B-209ENST00000518879 MTUS2Q5JR59 1369 aa29.73■■■□□ 2.35
FAM49B-209ENST00000518879 AGLP35573 1532 aa29.72■■■□□ 2.35
FAM49B-209ENST00000518879 SYCP2Q9BX26 1530 aa29.71■■■□□ 2.35
FAM49B-209ENST00000518879 CCNB3Q8WWL7 1395 aa29.7■■■□□ 2.35
FAM49B-209ENST00000518879 CFDP1Q9UEE9 299 aaPredicted RBP29.68■■■□□ 2.34
FAM49B-209ENST00000518879 PLEKHH2Q8IVE3 1493 aa29.68■■■□□ 2.34
FAM49B-209ENST00000518879 SETD1BQ9UPS6 1966 aaKnown RBP29.67■■■□□ 2.34
FAM49B-209ENST00000518879 UHRF1BP1Q6BDS2 1440 aa29.66■■■□□ 2.34
FAM49B-209ENST00000518879 SPAG9O60271 1321 aaKnown RBP29.66■■■□□ 2.34
FAM49B-209ENST00000518879 C3P01024 1663 aa29.66■■■□□ 2.34
FAM49B-209ENST00000518879 HNRNPMP52272 730 aaKnown RBP eCLIP29.64■■■□□ 2.34
FAM49B-209ENST00000518879 KIAA1107Q9UPP5 1409 aa29.62■■■□□ 2.33
FAM49B-209ENST00000518879 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
FAM49B-209ENST00000518879 EHBP1L1Q8N3D4 1523 aa29.61■■■□□ 2.33
FAM49B-209ENST00000518879 CNTLNQ9NXG0 1405 aa29.61■■■□□ 2.33
FAM49B-209ENST00000518879 ATP7AQ04656 1500 aa29.6■■■□□ 2.33
FAM49B-209ENST00000518879 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
FAM49B-209ENST00000518879 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
FAM49B-209ENST00000518879 TIAM1Q13009 1591 aa29.56■■■□□ 2.32
FAM49B-209ENST00000518879 DMRT2Q9Y5R5 561 aa29.54■■■□□ 2.32
FAM49B-209ENST00000518879 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
FAM49B-209ENST00000518879 STRCQ7RTU9 1775 aa29.52■■■□□ 2.32
FAM49B-209ENST00000518879 A2MP01023 1474 aa29.5■■■□□ 2.31
FAM49B-209ENST00000518879 ADGBQ8N7X0 1667 aa29.49■■■□□ 2.31
FAM49B-209ENST00000518879 PLXNC1O60486 1568 aa29.48■■■□□ 2.31
FAM49B-209ENST00000518879 CERKQ8TCT0 537 aa29.48■■■□□ 2.31
FAM49B-209ENST00000518879 CLTCQ00610 1675 aaKnown RBP29.45■■■□□ 2.31
FAM49B-209ENST00000518879 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.3
FAM49B-209ENST00000518879 NPATQ14207 1427 aa29.43■■■□□ 2.3
FAM49B-209ENST00000518879 ZMYM3Q14202 1370 aa29.42■■■□□ 2.3
FAM49B-209ENST00000518879 GGT6Q6P531 493 aa29.4■■■□□ 2.3
FAM49B-209ENST00000518879 MBD5Q9P267 1494 aa29.4■■■□□ 2.3
FAM49B-209ENST00000518879 NCOA2Q15596 1464 aa29.39■■■□□ 2.3
FAM49B-209ENST00000518879 RTEL1-TNFRSF6BF6WH68 1400 aa29.37■■■□□ 2.29
FAM49B-209ENST00000518879 PTPRTO14522 1441 aa29.36■■■□□ 2.29
FAM49B-209ENST00000518879 PPP6R1Q9UPN7 881 aa29.34■■■□□ 2.29
FAM49B-209ENST00000518879 CAMSAP2Q08AD1 1489 aa29.34■■■□□ 2.29
FAM49B-209ENST00000518879 CCDC141Q6ZP82 1450 aa29.34■■■□□ 2.29
FAM49B-209ENST00000518879 NCOA1Q15788 1441 aa29.32■■■□□ 2.28
FAM49B-209ENST00000518879 CAMSAP1Q5T5Y3 1602 aa29.31■■■□□ 2.28
FAM49B-209ENST00000518879 VPS8Q8N3P4 1428 aa29.31■■■□□ 2.28
FAM49B-209ENST00000518879 RSPH4AQ5TD94 716 aa29.3■■■□□ 2.28
FAM49B-209ENST00000518879 MYO3AQ8NEV4 1616 aa29.3■■■□□ 2.28
FAM49B-209ENST00000518879 DHX29Q7Z478 1369 aaKnown RBP29.28■■■□□ 2.28
FAM49B-209ENST00000518879 ZNF142P52746 1687 aaPredicted RBP29.28■■■□□ 2.28
FAM49B-209ENST00000518879 LOC105371045A0A1W2PR82 267 aa29.27■■■□□ 2.28
FAM49B-209ENST00000518879 PTPRKQ15262 1439 aa29.27■■■□□ 2.28
FAM49B-209ENST00000518879 LRRC9Q6ZRR7 1453 aa29.24■■■□□ 2.27
FAM49B-209ENST00000518879 ARHGEF5Q12774 1597 aa29.23■■■□□ 2.27
FAM49B-209ENST00000518879 CEP170BQ9Y4F5 1589 aaPredicted RBP29.23■■■□□ 2.27
FAM49B-209ENST00000518879 KIF3BO15066 747 aa29.22■■■□□ 2.27
FAM49B-209ENST00000518879 TSPY4P0CV99 314 aa29.22■■■□□ 2.27
FAM49B-209ENST00000518879 TSPY10P0CW01 314 aa29.22■■■□□ 2.27
FAM49B-209ENST00000518879 KDM5DQ9BY66 1539 aa29.18■■■□□ 2.26
FAM49B-209ENST00000518879 FAM135AQ9P2D6 1515 aa29.18■■■□□ 2.26
FAM49B-209ENST00000518879 PLA2R1Q13018 1463 aa29.17■■■□□ 2.26
FAM49B-209ENST00000518879 NCKAP5LQ9HCH0 1330 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms