RNA–Protein interactions for RNA: ENST00000518879.5

FAM49B-209, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-209ENST00000518879 NISCHQ9Y2I1 1504 aa46.04■■■■■ 4.96
FAM49B-209ENST00000518879 CCDC180Q9P1Z9 1646 aa41.37■■■■■ 4.21
FAM49B-209ENST00000518879 ABCC9O60706 1549 aa41.26■■■■■ 4.2
FAM49B-209ENST00000518879 RB1CC1Q8TDY2 1594 aa39.36■■■■□ 3.89
FAM49B-209ENST00000518879 NACADO15069 1562 aa39.08■■■■□ 3.85
FAM49B-209ENST00000518879 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
FAM49B-209ENST00000518879 DNAJC5BQ9UF47 199 aa38.52■■■■□ 3.76
FAM49B-209ENST00000518879 MYO15BQ96JP2 1530 aa38.51■■■■□ 3.76
FAM49B-209ENST00000518879 UNC13AQ9UPW8 1703 aa38.46■■■■□ 3.75
FAM49B-209ENST00000518879 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
FAM49B-209ENST00000518879 ZCCHC6Q5VYS8 1495 aaKnown RBP38.17■■■■□ 3.7
FAM49B-209ENST00000518879 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
FAM49B-209ENST00000518879 DCAF1Q9Y4B6 1507 aa38.04■■■■□ 3.68
FAM49B-209ENST00000518879 SCRIBQ14160 1630 aa37.69■■■■□ 3.62
FAM49B-209ENST00000518879 SHROOM4Q9ULL8 1493 aa37.68■■■■□ 3.62
FAM49B-209ENST00000518879 CC2D2AQ9P2K1 1620 aa37.29■■■■□ 3.56
FAM49B-209ENST00000518879 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
FAM49B-209ENST00000518879 CECR2Q9BXF3 1484 aa37.17■■■■□ 3.54
FAM49B-209ENST00000518879 NCAPD3P42695 1498 aa36.01■■■■□ 3.36
FAM49B-209ENST00000518879 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
FAM49B-209ENST00000518879 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
FAM49B-209ENST00000518879 SMARCA2P51531 1590 aa35.89■■■■□ 3.34
FAM49B-209ENST00000518879 HMGXB3Q12766 1538 aa35.8■■■■□ 3.32
FAM49B-209ENST00000518879 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
FAM49B-209ENST00000518879 ERCC6Q03468 1493 aa35.7■■■■□ 3.31
FAM49B-209ENST00000518879 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
FAM49B-209ENST00000518879 CUX2O14529 1486 aa35.57■■■■□ 3.28
FAM49B-209ENST00000518879 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
FAM49B-209ENST00000518879 MROH2BQ7Z745 1585 aa35.46■■■■□ 3.27
FAM49B-209ENST00000518879 NESP48681 1621 aa35.43■■■■□ 3.26
FAM49B-209ENST00000518879 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
FAM49B-209ENST00000518879 LAMC3Q9Y6N6 1575 aa35.26■■■■□ 3.24
FAM49B-209ENST00000518879 THOC2Q8NI27 1593 aaKnown RBP35.09■■■■□ 3.21
FAM49B-209ENST00000518879 WIZO95785 1651 aa35.08■■■■□ 3.21
FAM49B-209ENST00000518879 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
FAM49B-209ENST00000518879 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
FAM49B-209ENST00000518879 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
FAM49B-209ENST00000518879 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
FAM49B-209ENST00000518879 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
FAM49B-209ENST00000518879 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
FAM49B-209ENST00000518879 WDR62O43379 1518 aa34.64■■■■□ 3.14
FAM49B-209ENST00000518879 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
FAM49B-209ENST00000518879 FANCD2Q9BXW9 1451 aa34.57■■■■□ 3.12
FAM49B-209ENST00000518879 CFTRP13569 1480 aa34.54■■■■□ 3.12
FAM49B-209ENST00000518879 PRDM2Q13029 1718 aa34.34■■■■□ 3.09
FAM49B-209ENST00000518879 URB2Q14146 1524 aaKnown RBP34.24■■■■□ 3.07
FAM49B-209ENST00000518879 CCDC88BA6NC98 1476 aa34.21■■■■□ 3.07
FAM49B-209ENST00000518879 TRIM41Q8WV44 630 aa33.97■■■■□ 3.03
FAM49B-209ENST00000518879 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
FAM49B-209ENST00000518879 IFT140Q96RY7 1462 aa33.92■■■■□ 3.02
FAM49B-209ENST00000518879 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
FAM49B-209ENST00000518879 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
FAM49B-209ENST00000518879 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
FAM49B-209ENST00000518879 ZNF608Q9ULD9 1512 aaPredicted RBP33.8■■■■□ 3
FAM49B-209ENST00000518879 EIF4G3O43432 1585 aaKnown RBP33.69■■■□□ 2.98
FAM49B-209ENST00000518879 TARBP1Q13395 1621 aaKnown RBP33.6■■■□□ 2.97
FAM49B-209ENST00000518879 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
FAM49B-209ENST00000518879 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.96
FAM49B-209ENST00000518879 RIMBP3CA6NJZ7 1639 aa33.5■■■□□ 2.95
FAM49B-209ENST00000518879 RIMBP3BA6NNM3 1639 aa33.5■■■□□ 2.95
FAM49B-209ENST00000518879 RIMBP3Q9UFD9 1639 aa33.5■■■□□ 2.95
FAM49B-209ENST00000518879 CHD1O14646 1710 aa33.45■■■□□ 2.95
FAM49B-209ENST00000518879 SOGA1O94964 1423 aa33.43■■■□□ 2.94
FAM49B-209ENST00000518879 RAD54L2Q9Y4B4 1467 aa33.42■■■□□ 2.94
FAM49B-209ENST00000518879 ARHGEF11O15085 1522 aa33.38■■■□□ 2.93
FAM49B-209ENST00000518879 FBLN2P98095 1184 aa33.37■■■□□ 2.93
FAM49B-209ENST00000518879 FGD5Q6ZNL6 1462 aa33.37■■■□□ 2.93
FAM49B-209ENST00000518879 CUX1P39880 1505 aa33.33■■■□□ 2.93
FAM49B-209ENST00000518879 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
FAM49B-209ENST00000518879 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
FAM49B-209ENST00000518879 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
FAM49B-209ENST00000518879 SNAPC4Q5SXM2 1469 aa33.22■■■□□ 2.91
FAM49B-209ENST00000518879 MAGI1Q96QZ7 1491 aaPredicted RBP33.15■■■□□ 2.9
FAM49B-209ENST00000518879 GRIN2BQ13224 1484 aa33.14■■■□□ 2.9
FAM49B-209ENST00000518879 CYB5RLQ6IPT4 315 aa33.14■■■□□ 2.9
FAM49B-209ENST00000518879 CHMP7Q8WUX9 453 aaPredicted RBP33.12■■■□□ 2.89
FAM49B-209ENST00000518879 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
FAM49B-209ENST00000518879 SYNJ1O43426 1573 aa33.07■■■□□ 2.88
FAM49B-209ENST00000518879 GAPVD1Q14C86 1478 aa33.04■■■□□ 2.88
FAM49B-209ENST00000518879 ARAP1Q96P48 1450 aa33.04■■■□□ 2.88
FAM49B-209ENST00000518879 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
FAM49B-209ENST00000518879 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
FAM49B-209ENST00000518879 ABCA10Q8WWZ4 1543 aa32.99■■■□□ 2.87
FAM49B-209ENST00000518879 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.86
FAM49B-209ENST00000518879 WRNQ14191 1432 aaPredicted RBP eCLIP32.91■■■□□ 2.86
FAM49B-209ENST00000518879 BIVM-ERCC5R4GMW8 1640 aa32.86■■■□□ 2.85
FAM49B-209ENST00000518879 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
FAM49B-209ENST00000518879 TRHP20396 242 aaPredicted RBP32.82■■■□□ 2.84
FAM49B-209ENST00000518879 ADAMTS12P58397 1594 aa32.71■■■□□ 2.83
FAM49B-209ENST00000518879 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
FAM49B-209ENST00000518879 FHAD1B1AJZ9 1412 aa32.61■■■□□ 2.81
FAM49B-209ENST00000518879 ERICH3Q5RHP9 1530 aa32.61■■■□□ 2.81
FAM49B-209ENST00000518879 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
FAM49B-209ENST00000518879 NUP160Q12769 1436 aa32.56■■■□□ 2.8
FAM49B-209ENST00000518879 ERCC6L2Q5T890 1561 aa32.46■■■□□ 2.79
FAM49B-209ENST00000518879 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
FAM49B-209ENST00000518879 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
FAM49B-209ENST00000518879 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
FAM49B-209ENST00000518879 RUSC2Q8N2Y8 1516 aa32.25■■■□□ 2.75
FAM49B-209ENST00000518879 KIF27Q86VH2 1401 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms