RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.73
SQLE-202ENST00000518604 G3V3G9 751 aa10.51□□□□□ -0.73
SQLE-202ENST00000518604 SEC24BO95487 1268 aa10.51□□□□□ -0.73
SQLE-202ENST00000518604 MFSD10Q14728 455 aa10.51□□□□□ -0.73
SQLE-202ENST00000518604 MICALL2Q8IY33 904 aa10.5□□□□□ -0.73
SQLE-202ENST00000518604 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
SQLE-202ENST00000518604 TMEM121BQ9BXQ6 578 aaPredicted RBP10.5□□□□□ -0.73
SQLE-202ENST00000518604 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
SQLE-202ENST00000518604 E2F4Q16254 413 aa10.49□□□□□ -0.73
SQLE-202ENST00000518604 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
SQLE-202ENST00000518604 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
SQLE-202ENST00000518604 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
SQLE-202ENST00000518604 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.73
SQLE-202ENST00000518604 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
SQLE-202ENST00000518604 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
SQLE-202ENST00000518604 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
SQLE-202ENST00000518604 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
SQLE-202ENST00000518604 CAMK2BQ13554 666 aa10.41□□□□□ -0.74
SQLE-202ENST00000518604 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
SQLE-202ENST00000518604 ARIH1Q9Y4X5 557 aaPredicted RBP10.41□□□□□ -0.74
SQLE-202ENST00000518604 POTEFA5A3E0 1075 aa10.4□□□□□ -0.74
SQLE-202ENST00000518604 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
SQLE-202ENST00000518604 PCDH10Q9P2E7 1040 aa10.4□□□□□ -0.74
SQLE-202ENST00000518604 FOXK1P85037 733 aa10.38□□□□□ -0.75
SQLE-202ENST00000518604 KIF3CO14782 793 aa10.37□□□□□ -0.75
SQLE-202ENST00000518604 DSG2Q14126 1118 aa10.35□□□□□ -0.75
SQLE-202ENST00000518604 C2orf72A6NCS6 295 aa10.34□□□□□ -0.75
SQLE-202ENST00000518604 C3orf67Q6ZVT6 689 aa10.32□□□□□ -0.76
SQLE-202ENST00000518604 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
SQLE-202ENST00000518604 MAMSTRQ6ZN01 415 aa10.31□□□□□ -0.76
SQLE-202ENST00000518604 PLPP6Q8IY26 295 aa10.31□□□□□ -0.76
SQLE-202ENST00000518604 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
SQLE-202ENST00000518604 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.77
SQLE-202ENST00000518604 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
SQLE-202ENST00000518604 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
SQLE-202ENST00000518604 SPDYE16A6NNV3 312 aaPredicted RBP10.26□□□□□ -0.77
SQLE-202ENST00000518604 EMILIN3Q9NT22 766 aa10.26□□□□□ -0.77
SQLE-202ENST00000518604 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SQLE-202ENST00000518604 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
SQLE-202ENST00000518604 SEMA3EO15041 775 aa10.24□□□□□ -0.77
SQLE-202ENST00000518604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
SQLE-202ENST00000518604 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
SQLE-202ENST00000518604 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
SQLE-202ENST00000518604 DPYSL4O14531 572 aa10.21□□□□□ -0.77
SQLE-202ENST00000518604 PDIA6Q15084 440 aa10.21□□□□□ -0.77
SQLE-202ENST00000518604 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
SQLE-202ENST00000518604 LMOD2Q6P5Q4 547 aa10.2□□□□□ -0.78
SQLE-202ENST00000518604 SLC34A2O95436 690 aa10.19□□□□□ -0.78
SQLE-202ENST00000518604 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
SQLE-202ENST00000518604 TBC1D12O60347 775 aa10.17□□□□□ -0.78
SQLE-202ENST00000518604 PTCD2Q8WV60 388 aaKnown RBP10.17□□□□□ -0.78
SQLE-202ENST00000518604 UPF1Q92900 1129 aaKnown RBP eCLIP10.14□□□□□ -0.79
SQLE-202ENST00000518604 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
SQLE-202ENST00000518604 PTGER2P43116 358 aa10.11□□□□□ -0.79
SQLE-202ENST00000518604 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
SQLE-202ENST00000518604 CDAN1Q8IWY9 1227 aa10.09□□□□□ -0.79
SQLE-202ENST00000518604 EVI5O60447 810 aa10.08□□□□□ -0.8
SQLE-202ENST00000518604 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
SQLE-202ENST00000518604 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
SQLE-202ENST00000518604 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
SQLE-202ENST00000518604 ZC3H15Q8WU90 426 aaKnown RBP10.06□□□□□ -0.8
SQLE-202ENST00000518604 PCDHGA4Q9Y5G9 962 aa10.05□□□□□ -0.8
SQLE-202ENST00000518604 ZSWIM6Q9HCJ5 1215 aa10.04□□□□□ -0.8
SQLE-202ENST00000518604 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
SQLE-202ENST00000518604 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
SQLE-202ENST00000518604 RBM26Q5T8P6 1007 aaKnown RBP10.02□□□□□ -0.81
SQLE-202ENST00000518604 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
SQLE-202ENST00000518604 SNPHO15079 494 aa10□□□□□ -0.81
SQLE-202ENST00000518604 HOXB3P14651 431 aaPredicted RBP10□□□□□ -0.81
SQLE-202ENST00000518604 OSBPP22059 807 aa10□□□□□ -0.81
SQLE-202ENST00000518604 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
SQLE-202ENST00000518604 ST18O60284 1047 aa9.99□□□□□ -0.81
SQLE-202ENST00000518604 ZMYND10O75800 440 aa9.99□□□□□ -0.81
SQLE-202ENST00000518604 DDX12PQ92771 950 aa9.99□□□□□ -0.81
SQLE-202ENST00000518604 EPAS1Q99814 870 aa9.99□□□□□ -0.81
SQLE-202ENST00000518604 PHF14O94880 888 aa9.98□□□□□ -0.81
SQLE-202ENST00000518604 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
SQLE-202ENST00000518604 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
SQLE-202ENST00000518604 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
SQLE-202ENST00000518604 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
SQLE-202ENST00000518604 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
SQLE-202ENST00000518604 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
SQLE-202ENST00000518604 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
SQLE-202ENST00000518604 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
SQLE-202ENST00000518604 FCHSD2O94868 740 aa9.91□□□□□ -0.82
SQLE-202ENST00000518604 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
SQLE-202ENST00000518604 GPR37O15354 613 aa9.9□□□□□ -0.82
SQLE-202ENST00000518604 NUDT7P0C024 238 aa9.9□□□□□ -0.82
SQLE-202ENST00000518604 FOSBP53539 338 aa9.9□□□□□ -0.82
SQLE-202ENST00000518604 EN1Q05925 392 aaPredicted RBP9.9□□□□□ -0.82
SQLE-202ENST00000518604 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
SQLE-202ENST00000518604 HIC1Q14526 733 aa9.89□□□□□ -0.83
SQLE-202ENST00000518604 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
SQLE-202ENST00000518604 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
SQLE-202ENST00000518604 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
SQLE-202ENST00000518604 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
SQLE-202ENST00000518604 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
SQLE-202ENST00000518604 SPNS2Q8IVW8 549 aa9.87□□□□□ -0.83
SQLE-202ENST00000518604 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.83
SQLE-202ENST00000518604 AK7Q96M32 723 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms