RNA–Protein interactions for RNA: ENST00000518149.5

NKX2-1-203, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-203ENST00000518149 NCOA2Q15596 1464 aa26.52■■□□□ 1.84
NKX2-1-203ENST00000518149 TROQ12816 1431 aaPredicted RBP26.52■■□□□ 1.84
NKX2-1-203ENST00000518149 RAB3GAP2Q9H2M9 1393 aa26.5■■□□□ 1.83
NKX2-1-203ENST00000518149 KIF14Q15058 1648 aa26.48■■□□□ 1.83
NKX2-1-203ENST00000518149 NPM1P06748 294 aaKnown RBP eCLIP26.48■■□□□ 1.83
NKX2-1-203ENST00000518149 SUPT6HQ7KZ85 1726 aaKnown RBP26.47■■□□□ 1.83
NKX2-1-203ENST00000518149 PPP1R15AO75807 674 aaPredicted RBP26.43■■□□□ 1.82
NKX2-1-203ENST00000518149 FAM50AQ14320 339 aaKnown RBP26.42■■□□□ 1.82
NKX2-1-203ENST00000518149 CCER2I3L3R5 266 aa26.41■■□□□ 1.82
NKX2-1-203ENST00000518149 ASXL2Q76L83 1435 aa26.4■■□□□ 1.82
NKX2-1-203ENST00000518149 TRIM52Q96A61 297 aa26.38■■□□□ 1.81
NKX2-1-203ENST00000518149 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
NKX2-1-203ENST00000518149 MSH5O43196 834 aa26.38■■□□□ 1.81
NKX2-1-203ENST00000518149 WDR7Q9Y4E6 1490 aa26.35■■□□□ 1.81
NKX2-1-203ENST00000518149 MYOM3Q5VTT5 1437 aa26.35■■□□□ 1.81
NKX2-1-203ENST00000518149 SETD5Q9C0A6 1442 aa26.35■■□□□ 1.81
NKX2-1-203ENST00000518149 ANP32CO43423 234 aa26.33■■□□□ 1.81
NKX2-1-203ENST00000518149 FGD6Q6ZV73 1430 aa26.32■■□□□ 1.8
NKX2-1-203ENST00000518149 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
NKX2-1-203ENST00000518149 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
NKX2-1-203ENST00000518149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.3■■□□□ 1.8
NKX2-1-203ENST00000518149 TTC37Q6PGP7 1564 aa26.3■■□□□ 1.8
NKX2-1-203ENST00000518149 ZNF644Q9H582 1327 aaPredicted RBP26.3■■□□□ 1.8
NKX2-1-203ENST00000518149 ZNF777Q9ULD5 760 aaPredicted RBP26.29■■□□□ 1.8
NKX2-1-203ENST00000518149 GPATCH8Q9UKJ3 1502 aaKnown RBP26.29■■□□□ 1.8
NKX2-1-203ENST00000518149 FANCIQ9NVI1 1328 aa26.28■■□□□ 1.8
NKX2-1-203ENST00000518149 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
NKX2-1-203ENST00000518149 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
NKX2-1-203ENST00000518149 CDC42BPAQ5VT25 1732 aa26.23■■□□□ 1.79
NKX2-1-203ENST00000518149 PTPN23Q9H3S7 1636 aa26.21■■□□□ 1.79
NKX2-1-203ENST00000518149 HIRIP3Q9BW71 556 aaPredicted RBP26.21■■□□□ 1.79
NKX2-1-203ENST00000518149 ERICH6Q7L0X2 663 aa26.2■■□□□ 1.78
NKX2-1-203ENST00000518149 MIA2Q96PC5 1412 aa26.17■■□□□ 1.78
NKX2-1-203ENST00000518149 ITSN2Q9NZM3 1697 aa26.16■■□□□ 1.78
NKX2-1-203ENST00000518149 CDC42BPBQ9Y5S2 1711 aa26.16■■□□□ 1.78
NKX2-1-203ENST00000518149 ARHGAP5Q13017 1502 aa26.14■■□□□ 1.77
NKX2-1-203ENST00000518149 PREX2Q70Z35 1606 aa26.12■■□□□ 1.77
NKX2-1-203ENST00000518149 MYO5CQ9NQX4 1742 aa26.12■■□□□ 1.77
NKX2-1-203ENST00000518149 FAM69CQ0P6D2 419 aa26.12■■□□□ 1.77
NKX2-1-203ENST00000518149 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
NKX2-1-203ENST00000518149 ABCA9Q8IUA7 1624 aa26.11■■□□□ 1.77
NKX2-1-203ENST00000518149 PLCH2O75038 1416 aa26.1■■□□□ 1.77
NKX2-1-203ENST00000518149 TCOF1Q13428 1488 aaKnown RBP26.1■■□□□ 1.77
NKX2-1-203ENST00000518149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.1■■□□□ 1.77
NKX2-1-203ENST00000518149 CHIC2Q9UKJ5 165 aa26.09■■□□□ 1.77
NKX2-1-203ENST00000518149 PTPRKQ15262 1439 aa26.09■■□□□ 1.77
NKX2-1-203ENST00000518149 HNRNPMP52272 730 aaKnown RBP eCLIP26.08■■□□□ 1.77
NKX2-1-203ENST00000518149 CD109Q6YHK3 1445 aa26.07■■□□□ 1.76
NKX2-1-203ENST00000518149 SAMD9LQ8IVG5 1584 aa26.05■■□□□ 1.76
NKX2-1-203ENST00000518149 MYT1LQ9UL68 1186 aa26.04■■□□□ 1.76
NKX2-1-203ENST00000518149 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
NKX2-1-203ENST00000518149 DIP2BQ9P265 1576 aa26.03■■□□□ 1.76
NKX2-1-203ENST00000518149 IRX6P78412 446 aaPredicted RBP26.02■■□□□ 1.76
NKX2-1-203ENST00000518149 HNRNPUQ00839 825 aaKnown RBP eCLIP26.02■■□□□ 1.76
NKX2-1-203ENST00000518149 FANCAO15360 1455 aa26.01■■□□□ 1.75
NKX2-1-203ENST00000518149 ABCC5O15440 1437 aa25.99■■□□□ 1.75
NKX2-1-203ENST00000518149 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
NKX2-1-203ENST00000518149 DAPK1P53355 1430 aa25.98■■□□□ 1.75
NKX2-1-203ENST00000518149 ERICH6BQ5W0A0 696 aa25.97■■□□□ 1.75
NKX2-1-203ENST00000518149 ARHGEF12Q9NZN5 1544 aa25.96■■□□□ 1.75
NKX2-1-203ENST00000518149 TONSLQ96HA7 1378 aa25.96■■□□□ 1.75
NKX2-1-203ENST00000518149 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
NKX2-1-203ENST00000518149 TSPOAP1O95153 1857 aa25.95■■□□□ 1.75
NKX2-1-203ENST00000518149 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
NKX2-1-203ENST00000518149 DNMT1P26358 1616 aaKnown RBP25.94■■□□□ 1.74
NKX2-1-203ENST00000518149 MAP3K4Q9Y6R4 1608 aa25.93■■□□□ 1.74
NKX2-1-203ENST00000518149 GLI2P10070 1586 aa25.93■■□□□ 1.74
NKX2-1-203ENST00000518149 KIF13AQ9H1H9 1805 aa25.92■■□□□ 1.74
NKX2-1-203ENST00000518149 ARAP3Q8WWN8 1544 aa25.91■■□□□ 1.74
NKX2-1-203ENST00000518149 PPP4R2Q9NY27 417 aa25.91■■□□□ 1.74
NKX2-1-203ENST00000518149 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
NKX2-1-203ENST00000518149 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
NKX2-1-203ENST00000518149 AKNAQ7Z591 1439 aa25.89■■□□□ 1.74
NKX2-1-203ENST00000518149 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.74
NKX2-1-203ENST00000518149 ABCC1P33527 1531 aa25.89■■□□□ 1.74
NKX2-1-203ENST00000518149 ADGRL1O94910 1474 aa25.89■■□□□ 1.73
NKX2-1-203ENST00000518149 DEKP35659 375 aaKnown RBP25.88■■□□□ 1.73
NKX2-1-203ENST00000518149 SCAPERQ9BY12 1400 aa25.87■■□□□ 1.73
NKX2-1-203ENST00000518149 HFM1A2PYH4 1435 aa25.87■■□□□ 1.73
NKX2-1-203ENST00000518149 TSPY4P0CV99 314 aa25.87■■□□□ 1.73
NKX2-1-203ENST00000518149 TSPY10P0CW01 314 aa25.87■■□□□ 1.73
NKX2-1-203ENST00000518149 KIAA1107Q9UPP5 1409 aa25.86■■□□□ 1.73
NKX2-1-203ENST00000518149 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
NKX2-1-203ENST00000518149 PLEKHH2Q8IVE3 1493 aa25.84■■□□□ 1.73
NKX2-1-203ENST00000518149 C9orf84Q5VXU9 1444 aa25.83■■□□□ 1.73
NKX2-1-203ENST00000518149 ARHGEF5Q12774 1597 aa25.83■■□□□ 1.72
NKX2-1-203ENST00000518149 CROCC2H7BZ55 1655 aa25.82■■□□□ 1.72
NKX2-1-203ENST00000518149 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
NKX2-1-203ENST00000518149 PPRC1Q5VV67 1664 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-203ENST00000518149 NAIPQ13075 1403 aa25.8■■□□□ 1.72
NKX2-1-203ENST00000518149 RSPH4AQ5TD94 716 aa25.78■■□□□ 1.72
NKX2-1-203ENST00000518149 NCOA1Q15788 1441 aa25.78■■□□□ 1.72
NKX2-1-203ENST00000518149 NEO1Q92859 1461 aa25.76■■□□□ 1.71
NKX2-1-203ENST00000518149 CFAP74Q9C0B2 1584 aa25.75■■□□□ 1.71
NKX2-1-203ENST00000518149 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
NKX2-1-203ENST00000518149 KDM6BO15054 1643 aa25.74■■□□□ 1.71
NKX2-1-203ENST00000518149 SHANK2Q9UPX8 1470 aa25.74■■□□□ 1.71
NKX2-1-203ENST00000518149 ROCK1Q13464 1354 aa25.73■■□□□ 1.71
NKX2-1-203ENST00000518149 ANKRD30AQ9BXX3 1397 aa25.73■■□□□ 1.71
NKX2-1-203ENST00000518149 B4GALNT3Q6L9W6 998 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms