RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 DDX27Q96GQ7 796 aaKnown RBP7.15□□□□□ -1.26
SKP1-203ENST00000517625 GPHNQ9NQX3 736 aaPredicted RBP7.15□□□□□ -1.26
SKP1-203ENST00000517625 METRNQ9UJH8 293 aa7.15□□□□□ -1.26
SKP1-203ENST00000517625 ARHGEF1Q92888 912 aaKnown RBP7.14□□□□□ -1.27
SKP1-203ENST00000517625 LARP6Q9BRS8 491 aaKnown RBP7.14□□□□□ -1.27
SKP1-203ENST00000517625 DPY19L2Q6NUT2 758 aa7.13□□□□□ -1.27
SKP1-203ENST00000517625 KCNV2Q8TDN2 545 aa7.13□□□□□ -1.27
SKP1-203ENST00000517625 ARIH1Q9Y4X5 557 aaPredicted RBP7.13□□□□□ -1.27
SKP1-203ENST00000517625 POTEIP0CG38 1075 aa7.12□□□□□ -1.27
SKP1-203ENST00000517625 TMC2Q8TDI7 906 aa7.12□□□□□ -1.27
SKP1-203ENST00000517625 CAMK2BQ13554 666 aa7.11□□□□□ -1.27
SKP1-203ENST00000517625 COLQQ9Y215 455 aaPredicted RBP7.11□□□□□ -1.27
SKP1-203ENST00000517625 FOXK1P85037 733 aa7.1□□□□□ -1.27
SKP1-203ENST00000517625 PPP1R15BQ5SWA1 713 aa7.1□□□□□ -1.27
SKP1-203ENST00000517625 POTEFA5A3E0 1075 aa7.08□□□□□ -1.28
SKP1-203ENST00000517625 KIF3CO14782 793 aa7.08□□□□□ -1.28
SKP1-203ENST00000517625 C3orf67Q6ZVT6 689 aa7.07□□□□□ -1.28
SKP1-203ENST00000517625 TULP1O00294 542 aaPredicted RBP7.06□□□□□ -1.28
SKP1-203ENST00000517625 C2orf72A6NCS6 295 aa7.05□□□□□ -1.28
SKP1-203ENST00000517625 DSG2Q14126 1118 aa7.05□□□□□ -1.28
SKP1-203ENST00000517625 SPDYE16A6NNV3 312 aaPredicted RBP7.02□□□□□ -1.29
SKP1-203ENST00000517625 PLPP6Q8IY26 295 aa7.02□□□□□ -1.29
SKP1-203ENST00000517625 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.02□□□□□ -1.29
SKP1-203ENST00000517625 SMYD5Q6GMV2 418 aa7□□□□□ -1.29
SKP1-203ENST00000517625 TMEM92Q6UXU6 159 aa7□□□□□ -1.29
SKP1-203ENST00000517625 MAMSTRQ6ZN01 415 aa7□□□□□ -1.29
SKP1-203ENST00000517625 TESPA1A2RU30 521 aaPredicted RBP6.99□□□□□ -1.29
SKP1-203ENST00000517625 PDIA6Q15084 440 aa6.99□□□□□ -1.29
SKP1-203ENST00000517625 PLSCR2Q9NRY7 297 aa6.99□□□□□ -1.29
SKP1-203ENST00000517625 SLC34A2O95436 690 aa6.98□□□□□ -1.29
SKP1-203ENST00000517625 EMILIN3Q9NT22 766 aa6.98□□□□□ -1.29
SKP1-203ENST00000517625 ZNF316A6NFI3 1004 aaPredicted RBP6.97□□□□□ -1.29
SKP1-203ENST00000517625 DPYSL4O14531 572 aa6.96□□□□□ -1.3
SKP1-203ENST00000517625 OXER1Q8TDS5 423 aa6.96□□□□□ -1.3
SKP1-203ENST00000517625 SCUBE2Q9NQ36 999 aa6.96□□□□□ -1.3
SKP1-203ENST00000517625 SEMA3EO15041 775 aa6.95□□□□□ -1.3
SKP1-203ENST00000517625 TBC1D12O60347 775 aa6.95□□□□□ -1.3
SKP1-203ENST00000517625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.95□□□□□ -1.3
SKP1-203ENST00000517625 PTCD2Q8WV60 388 aaKnown RBP6.95□□□□□ -1.3
SKP1-203ENST00000517625 MAP3K9P80192 1104 aa6.94□□□□□ -1.3
SKP1-203ENST00000517625 TPRNQ4KMQ1 711 aa6.94□□□□□ -1.3
SKP1-203ENST00000517625 LMOD2Q6P5Q4 547 aa6.94□□□□□ -1.3
SKP1-203ENST00000517625 PTGER2P43116 358 aa6.91□□□□□ -1.3
SKP1-203ENST00000517625 DOK7Q18PE1 504 aa6.9□□□□□ -1.3
SKP1-203ENST00000517625 ZSWIM6Q9HCJ5 1215 aa6.9□□□□□ -1.3
SKP1-203ENST00000517625 RIMBP2O15034 1052 aa6.89□□□□□ -1.31
SKP1-203ENST00000517625 POTEJP0CG39 1038 aa6.89□□□□□ -1.31
SKP1-203ENST00000517625 UPF1Q92900 1129 aaKnown RBP eCLIP6.89□□□□□ -1.31
SKP1-203ENST00000517625 POTEB2H3BUK9 544 aa6.88□□□□□ -1.31
SKP1-203ENST00000517625 SLAIN1Q8ND83 568 aa6.88□□□□□ -1.31
SKP1-203ENST00000517625 SNPHO15079 494 aa6.87□□□□□ -1.31
SKP1-203ENST00000517625 EVI5O60447 810 aa6.87□□□□□ -1.31
SKP1-203ENST00000517625 ANO8Q9HCE9 1232 aaPredicted RBP6.87□□□□□ -1.31
SKP1-203ENST00000517625 MLLT3P42568 568 aaPredicted RBP6.86□□□□□ -1.31
SKP1-203ENST00000517625 PCDHGA4Q9Y5G9 962 aa6.86□□□□□ -1.31
SKP1-203ENST00000517625 PRKCSHP14314 528 aaPredicted RBP6.85□□□□□ -1.31
SKP1-203ENST00000517625 EPAS1Q99814 870 aa6.84□□□□□ -1.31
SKP1-203ENST00000517625 GPIHBP1Q8IV16 184 aa6.83□□□□□ -1.32
SKP1-203ENST00000517625 ZC3H15Q8WU90 426 aaKnown RBP6.83□□□□□ -1.32
SKP1-203ENST00000517625 KDM4FA0A1W2PPD8 638 aa6.82□□□□□ -1.32
SKP1-203ENST00000517625 PHF14O94880 888 aa6.82□□□□□ -1.32
SKP1-203ENST00000517625 HOXB3P14651 431 aaPredicted RBP6.82□□□□□ -1.32
SKP1-203ENST00000517625 JPH4Q96JJ6 628 aa6.82□□□□□ -1.32
SKP1-203ENST00000517625 PSDA5PKW4 1024 aaPredicted RBP6.81□□□□□ -1.32
SKP1-203ENST00000517625 GRXCR2A6NFK2 248 aa6.81□□□□□ -1.32
SKP1-203ENST00000517625 ZNF710Q8N1W2 664 aa6.81□□□□□ -1.32
SKP1-203ENST00000517625 FBXW7Q969H0 707 aa6.81□□□□□ -1.32
SKP1-203ENST00000517625 ZMYND10O75800 440 aa6.8□□□□□ -1.32
SKP1-203ENST00000517625 OSBPP22059 807 aa6.8□□□□□ -1.32
SKP1-203ENST00000517625 RBM26Q5T8P6 1007 aaKnown RBP6.8□□□□□ -1.32
SKP1-203ENST00000517625 LHX8Q68G74 356 aa6.79□□□□□ -1.32
SKP1-203ENST00000517625 TYW1BQ6NUM6 668 aa6.79□□□□□ -1.32
SKP1-203ENST00000517625 DDX12PQ92771 950 aa6.79□□□□□ -1.32
SKP1-203ENST00000517625 GPR153Q6NV75 609 aa6.78□□□□□ -1.32
SKP1-203ENST00000517625 BARGINQ6ZT62 677 aa6.78□□□□□ -1.32
SKP1-203ENST00000517625 FOSBP53539 338 aa6.77□□□□□ -1.33
SKP1-203ENST00000517625 EN1Q05925 392 aaPredicted RBP6.77□□□□□ -1.33
SKP1-203ENST00000517625 OTUD5Q96G74 571 aa6.77□□□□□ -1.33
SKP1-203ENST00000517625 GPR37O15354 613 aa6.76□□□□□ -1.33
SKP1-203ENST00000517625 FCHSD2O94868 740 aa6.76□□□□□ -1.33
SKP1-203ENST00000517625 HOXB1P14653 301 aaPredicted RBP6.76□□□□□ -1.33
SKP1-203ENST00000517625 HIC1Q14526 733 aa6.76□□□□□ -1.33
SKP1-203ENST00000517625 PCDHGA10Q9Y5H3 936 aa6.76□□□□□ -1.33
SKP1-203ENST00000517625 NUTM2FA1L443 756 aa6.75□□□□□ -1.33
SKP1-203ENST00000517625 ARSIQ5FYB1 569 aa6.75□□□□□ -1.33
SKP1-203ENST00000517625 CERKQ8TCT0 537 aa6.75□□□□□ -1.33
SKP1-203ENST00000517625 NUDT7P0C024 238 aa6.74□□□□□ -1.33
SKP1-203ENST00000517625 ZDHHC16Q969W1 377 aa6.74□□□□□ -1.33
SKP1-203ENST00000517625 GNPATO15228 680 aa6.73□□□□□ -1.33
SKP1-203ENST00000517625 MAP3K7O43318 606 aa6.73□□□□□ -1.33
SKP1-203ENST00000517625 PTGDRQ13258 359 aa6.73□□□□□ -1.33
SKP1-203ENST00000517625 PPP4R3BQ5MIZ7 849 aa6.73□□□□□ -1.33
SKP1-203ENST00000517625 MAP2K5Q13163 448 aa6.72□□□□□ -1.33
SKP1-203ENST00000517625 ZNF454Q8N9F8 522 aa6.72□□□□□ -1.33
SKP1-203ENST00000517625 AK7Q96M32 723 aa6.72□□□□□ -1.33
SKP1-203ENST00000517625 RBM27Q9P2N5 1060 aaKnown RBP6.72□□□□□ -1.33
SKP1-203ENST00000517625 MINK1Q8N4C8 1332 aaPredicted RBP6.72□□□□□ -1.33
SKP1-203ENST00000517625 PRIM1P49642 420 aaKnown RBP6.7□□□□□ -1.34
SKP1-203ENST00000517625 KRI1Q8N9T8 703 aaKnown RBP6.7□□□□□ -1.34
SKP1-203ENST00000517625 LHX6Q9UPM6 363 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms