RNA–Protein interactions for RNA: ENST00000517146.1

RNU4ATAC9P-201, Transcript of RNA, U4atac small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4ATAC9P, Length 126 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC9P-201ENST00000517146 A0A0G2JS52 829 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 IFFO2Q5TF58 517 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 KLHL34Q8N239 644 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 KCNH8Q96L42 1107 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 AXIN2Q9Y2T1 843 aa3.54□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 PSDA5PKW4 1024 aaPredicted RBP3.53□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 TK2O00142 265 aa3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 ARHGAP33O14559 1287 aa3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 LAPTM4AQ15012 233 aa3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 KHSRPQ92945 711 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 NUDT7P0C024 238 aa3.51□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 PTPN5P54829 565 aa3.51□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 TMEM92Q6UXU6 159 aa3.5□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 LHX6Q9UPM6 363 aa3.5□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 EFCAB3Q8N7B9 438 aa3.49□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 FBXO3Q9UK99 471 aa3.49□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 GOLGA8CPA6NN73 597 aa3.48□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 HRO43593 1189 aa3.47□□□□□ -1.85
RNU4ATAC9P-201ENST00000517146 SOX12O15370 315 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 PPP4R3BQ5MIZ7 849 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 TRAF7Q6Q0C0 670 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 POTEEQ6S8J3 1075 aa3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 CIZ1Q9ULV3 898 aaPredicted RBP3.46□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 EHMT2Q96KQ7 1210 aa3.45□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 PCDHGA4Q9Y5G9 962 aa3.45□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 PSEN2P49810 448 aa3.44□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 DMRTA1Q5VZB9 504 aa3.44□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 THSD4Q6ZMP0 1018 aa3.43□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 WNT2BQ93097 391 aa3.43□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 KCNK17Q96T54 332 aa3.43□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 GFRA3O60609 400 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 SLC34A2O95436 690 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 ZNF787Q6DD87 383 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 TMC2Q8TDI7 906 aa3.42□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 NLRP6P59044 892 aa3.41□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 MRPL50Q8N5N7 158 aaKnown RBP3.41□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 TRIM41Q8WV44 630 aa3.41□□□□□ -1.86
RNU4ATAC9P-201ENST00000517146 C2orf72A6NCS6 295 aa3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 VASPP50552 380 aaPredicted RBP3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 NBPF3Q9H094 633 aa3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 PHF8Q9UPP1 1060 aa3.4□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 NRG2O14511 850 aaPredicted RBP3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ITGBL1O95965 494 aaPredicted RBP3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 SPOCK2Q92563 424 aa3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 MS4A4AQ96JQ5 239 aa3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 VPS9D1Q9Y2B5 631 aa3.39□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 FKBP8Q14318 412 aa3.38□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 TBC1D12O60347 775 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 KCNC4Q03721 635 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 NYAP1Q6ZVC0 841 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ANKK1Q8NFD2 765 aa3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ZNF775Q96BV0 537 aaPredicted RBP3.37□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 KIF3CO14782 793 aa3.36□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 LCE2BO14633 110 aa3.35□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 RIOK3O14730 519 aaKnown RBP3.35□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 SLC4A5Q9BY07 1137 aa3.35□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 VGFO15240 615 aaPredicted RBP3.34□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 PTPREP23469 700 aa3.34□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 TAOK2Q9UL54 1235 aa3.34□□□□□ -1.87
RNU4ATAC9P-201ENST00000517146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.33□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 ZFP91Q96JP5 570 aaPredicted RBP3.33□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BHMG1C9JSJ3 638 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 ZNF454Q8N9F8 522 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 PTCD2Q8WV60 388 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 PRKD2Q9BZL6 878 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BCL2L12Q9HB09 334 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 STK17AQ9UEE5 414 aa3.32□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 PDZRN3Q9UPQ7 1066 aa3.31□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 FBXO22Q8NEZ5 403 aa3.3□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 V9GY48 417 aaPredicted RBP3.3□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 KDM4FA0A1W2PPD8 638 aa3.29□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BCAMP50895 628 aa3.29□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 ZBED2Q9BTP6 218 aa3.29□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 SOWAHBA6NEL2 793 aa3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 TREML4Q6UXN2 200 aa3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 BCL11BQ9C0K0 894 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 STK24Q9Y6E0 443 aa3.28□□□□□ -1.88
RNU4ATAC9P-201ENST00000517146 INSM1Q01101 510 aaPredicted RBP3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 PKDCCQ504Y2 493 aa3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 LAPTM4BQ86VI4 370 aa3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 PLPP6Q8IY26 295 aa3.27□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 MFRPQ9BY79 579 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 WBP1LQ9NX94 342 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 RABGEF1Q9UJ41 708 aa3.26□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 FAM181BA6NEQ2 426 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 GGCXP38435 758 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 FOXK1P85037 733 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 LRCH3Q96II8 777 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 TSR3Q9UJK0 312 aaKnown RBP3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 HPS5Q9UPZ3 1129 aa3.25□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 PPP1R3GB7ZBB8 358 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 FOSBP53539 338 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 IFNLR1Q8IU57 520 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 ZDHHC16Q969W1 377 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 JPH4Q96JJ6 628 aa3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 ZFRQ96KR1 1074 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC9P-201ENST00000517146 STK25O00506 426 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms