RNA–Protein interactions for RNA: ENST00000517146.1

RNU4ATAC9P-201, Transcript of RNA, U4atac small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4ATAC9P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC9P-201ENST00000517146 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
RNU4ATAC9P-201ENST00000517146 CHIC1Q5VXU3 224 aa8.2□□□□□ -1.1
RNU4ATAC9P-201ENST00000517146 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
RNU4ATAC9P-201ENST00000517146 PHF23Q9BUL5 403 aaPredicted RBP7.31□□□□□ -1.24
RNU4ATAC9P-201ENST00000517146 POTEDQ86YR6 584 aa7.13□□□□□ -1.27
RNU4ATAC9P-201ENST00000517146 FOXD1Q16676 465 aa6.97□□□□□ -1.29
RNU4ATAC9P-201ENST00000517146 MSH5O43196 834 aa6.78□□□□□ -1.32
RNU4ATAC9P-201ENST00000517146 PIAS4Q8N2W9 510 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC9P-201ENST00000517146 PLPPR3Q6T4P5 718 aa6.21□□□□□ -1.42
RNU4ATAC9P-201ENST00000517146 ADRA2BP18089 450 aa6.19□□□□□ -1.42
RNU4ATAC9P-201ENST00000517146 PPP6R1Q9UPN7 881 aa6.17□□□□□ -1.42
RNU4ATAC9P-201ENST00000517146 CACNB1Q02641 598 aaPredicted RBP6.03□□□□□ -1.44
RNU4ATAC9P-201ENST00000517146 DMRT2Q9Y5R5 561 aa5.87□□□□□ -1.47
RNU4ATAC9P-201ENST00000517146 SCAF1Q9H7N4 1312 aaKnown RBP5.82□□□□□ -1.48
RNU4ATAC9P-201ENST00000517146 MAPK8IP2Q13387 824 aaPredicted RBP5.76□□□□□ -1.49
RNU4ATAC9P-201ENST00000517146 DCAF8L1A6NGE4 600 aa5.75□□□□□ -1.49
RNU4ATAC9P-201ENST00000517146 RNF39Q9H2S5 420 aa5.67□□□□□ -1.5
RNU4ATAC9P-201ENST00000517146 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
RNU4ATAC9P-201ENST00000517146 POTEHQ6S545 545 aa5.55□□□□□ -1.52
RNU4ATAC9P-201ENST00000517146 HOXD11P31277 338 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC9P-201ENST00000517146 DNAJC5BQ9UF47 199 aa5.4□□□□□ -1.54
RNU4ATAC9P-201ENST00000517146 RNF216Q9NWF9 866 aaPredicted RBP5.39□□□□□ -1.55
RNU4ATAC9P-201ENST00000517146 CNKSR2Q8WXI2 1034 aa5.36□□□□□ -1.55
RNU4ATAC9P-201ENST00000517146 PPP4R3CPQ6ZMV5 832 aa5.35□□□□□ -1.55
RNU4ATAC9P-201ENST00000517146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.33□□□□□ -1.56
RNU4ATAC9P-201ENST00000517146 CAPN15O75808 1086 aa5.22□□□□□ -1.57
RNU4ATAC9P-201ENST00000517146 DSG3P32926 999 aa5.18□□□□□ -1.58
RNU4ATAC9P-201ENST00000517146 NCBP3Q53F19 620 aaKnown RBP5.14□□□□□ -1.59
RNU4ATAC9P-201ENST00000517146 SPINK5Q9NQ38 1064 aaPredicted RBP5.11□□□□□ -1.59
RNU4ATAC9P-201ENST00000517146 APLP2Q06481 763 aa5.1□□□□□ -1.59
RNU4ATAC9P-201ENST00000517146 RBM42Q9BTD8 480 aaKnown RBP5.08□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 U3KPZ7 1027 aaPredicted RBP5.08□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 SP7Q8TDD2 431 aaPredicted RBP5.05□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 ZNF219Q9P2Y4 722 aaPredicted RBP5.05□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 CHRDL2Q6WN34 429 aa5.04□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 TRHP20396 242 aaPredicted RBP5.03□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 ABCB7O75027 752 aa5.02□□□□□ -1.61
RNU4ATAC9P-201ENST00000517146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.96□□□□□ -1.62
RNU4ATAC9P-201ENST00000517146 HNRNPUL2Q1KMD3 747 aaKnown RBP4.96□□□□□ -1.62
RNU4ATAC9P-201ENST00000517146 NPM3O75607 178 aaKnown RBP4.94□□□□□ -1.62
RNU4ATAC9P-201ENST00000517146 HAX1O00165 279 aa4.88□□□□□ -1.63
RNU4ATAC9P-201ENST00000517146 SAMD1Q6SPF0 538 aaPredicted RBP4.88□□□□□ -1.63
RNU4ATAC9P-201ENST00000517146 AKT1S1Q96B36 256 aa4.82□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 PIP4P2Q8N4L2 257 aa4.81□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 PLSCR2Q9NRY7 297 aa4.8□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 POLA2Q14181 598 aa4.78□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 SLC4A2P04920 1241 aa4.76□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 ZBTB12Q9Y330 459 aaPredicted RBP4.76□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 REM2Q8IYK8 340 aaPredicted RBP4.75□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 LHX8Q68G74 356 aa4.73□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 FXR2P51116 673 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU4ATAC9P-201ENST00000517146 PITPNM1O00562 1244 aa4.7□□□□□ -1.66
RNU4ATAC9P-201ENST00000517146 MYCNP04198 464 aaPredicted RBP4.65□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 OSCARQ8IYS5 282 aa4.65□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 EVX2Q03828 476 aa4.64□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 GABBR2O75899 941 aa4.6□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 PRKAR2AP13861 404 aaKnown RBP4.6□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 C19orf67A6NJJ6 358 aa4.58□□□□□ -1.68
RNU4ATAC9P-201ENST00000517146 CLEC11AQ9Y240 323 aa4.56□□□□□ -1.68
RNU4ATAC9P-201ENST00000517146 SPDYE1Q8NFV5 336 aaPredicted RBP4.55□□□□□ -1.68
RNU4ATAC9P-201ENST00000517146 SPDYE2BA6NHP3 402 aa4.52□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 SPDYE6P0CI01 402 aa4.52□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 SPDYE2Q495Y8 402 aa4.52□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 KCNA4P22459 653 aa4.51□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 CLCN6P51797 869 aa4.5□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 DCBLD2Q96PD2 775 aa4.5□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 POTEMA6NI47 508 aa4.48□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 FBLN2P98095 1184 aa4.48□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 PCDH10Q9P2E7 1040 aa4.47□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 CD44P16070 742 aaKnown RBP4.46□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 POTEGQ6S5H5 508 aa4.46□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 CHADLQ6NUI6 762 aa4.44□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 ATF5Q9Y2D1 282 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 PRR29P0C7W0 189 aa4.43□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 POTEIP0CG38 1075 aa4.43□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 ZNF692Q9BU19 519 aaPredicted RBP4.41□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 FOXD4L1Q9NU39 408 aa4.39□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 OTUD5Q96G74 571 aa4.37□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 SSUH2Q9Y2M2 353 aa4.36□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 FARP1Q9Y4F1 1045 aaPredicted RBP4.36□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 ZNF579Q8NAF0 562 aaKnown RBP4.35□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 MAMSTRQ6ZN01 415 aa4.34□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 ZRANB1Q9UGI0 708 aa4.34□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 PAK3O75914 559 aaPredicted RBP4.32□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 PABPN1Q86U42 306 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 ATXN8OSP0DMR3 200 aa4.3□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 SCUBE2Q9NQ36 999 aa4.29□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 GALR2O43603 387 aaPredicted RBP4.28□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 FAM163AQ96GL9 167 aaPredicted RBP4.28□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 POTEB2H3BUK9 544 aa4.27□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 SLC4A1APQ9BWU0 796 aaKnown RBP4.26□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 METRNQ9UJH8 293 aa4.26□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 SLC39A7Q92504 469 aa4.25□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 C7P10643 843 aa4.24□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 MKRN4PQ13434 485 aaPredicted RBP4.23□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 CDAN1Q8IWY9 1227 aa4.22□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 PHF12Q96QT6 1004 aa4.21□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 NPM1P06748 294 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 ASTLQ6HA08 431 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms