RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 GSE1Q14687 1217 aa9.34□□□□□ -0.91
SCARNA6.1-201ENST00000516989 TPRNQ4KMQ1 711 aa9.34□□□□□ -0.91
SCARNA6.1-201ENST00000516989 KIF21BO75037 1637 aa9.34□□□□□ -0.91
SCARNA6.1-201ENST00000516989 IQGAP2Q13576 1575 aa9.33□□□□□ -0.92
SCARNA6.1-201ENST00000516989 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
SCARNA6.1-201ENST00000516989 HS6ST3Q8IZP7 471 aa9.33□□□□□ -0.92
SCARNA6.1-201ENST00000516989 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
SCARNA6.1-201ENST00000516989 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
SCARNA6.1-201ENST00000516989 PTPRGP23470 1445 aa9.31□□□□□ -0.92
SCARNA6.1-201ENST00000516989 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
SCARNA6.1-201ENST00000516989 TNIKQ9UKE5 1360 aa9.31□□□□□ -0.92
SCARNA6.1-201ENST00000516989 NUBP1P53384 320 aa9.3□□□□□ -0.92
SCARNA6.1-201ENST00000516989 DCAF8Q5TAQ9 597 aa9.3□□□□□ -0.92
SCARNA6.1-201ENST00000516989 RNF25Q96BH1 459 aaPredicted RBP9.3□□□□□ -0.92
SCARNA6.1-201ENST00000516989 UGGT2Q9NYU1 1516 aa9.3□□□□□ -0.92
SCARNA6.1-201ENST00000516989 DISP1Q96F81 1524 aa9.28□□□□□ -0.92
SCARNA6.1-201ENST00000516989 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
SCARNA6.1-201ENST00000516989 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
SCARNA6.1-201ENST00000516989 RIOK3O14730 519 aaKnown RBP9.25□□□□□ -0.93
SCARNA6.1-201ENST00000516989 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
SCARNA6.1-201ENST00000516989 KIAA0556O60303 1618 aa9.24□□□□□ -0.93
SCARNA6.1-201ENST00000516989 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
SCARNA6.1-201ENST00000516989 FHOD3Q2V2M9 1422 aa9.23□□□□□ -0.93
SCARNA6.1-201ENST00000516989 UACAQ9BZF9 1416 aa9.23□□□□□ -0.93
SCARNA6.1-201ENST00000516989 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
SCARNA6.1-201ENST00000516989 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
SCARNA6.1-201ENST00000516989 CLIP1P30622 1438 aa9.22□□□□□ -0.93
SCARNA6.1-201ENST00000516989 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
SCARNA6.1-201ENST00000516989 AKT1S1Q96B36 256 aa9.21□□□□□ -0.94
SCARNA6.1-201ENST00000516989 CREBZFQ9NS37 354 aa9.21□□□□□ -0.94
SCARNA6.1-201ENST00000516989 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.94
SCARNA6.1-201ENST00000516989 NBR1Q14596 966 aa9.2□□□□□ -0.94
SCARNA6.1-201ENST00000516989 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
SCARNA6.1-201ENST00000516989 PLB1Q6P1J6 1458 aa9.2□□□□□ -0.94
SCARNA6.1-201ENST00000516989 EFCAB5A4FU69 1503 aa9.2□□□□□ -0.94
SCARNA6.1-201ENST00000516989 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
SCARNA6.1-201ENST00000516989 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
SCARNA6.1-201ENST00000516989 STK25O00506 426 aa9.18□□□□□ -0.94
SCARNA6.1-201ENST00000516989 CEP162Q5TB80 1403 aa9.18□□□□□ -0.94
SCARNA6.1-201ENST00000516989 RBM42Q9BTD8 480 aaKnown RBP9.18□□□□□ -0.94
SCARNA6.1-201ENST00000516989 FMN1Q68DA7 1419 aa9.17□□□□□ -0.94
SCARNA6.1-201ENST00000516989 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
SCARNA6.1-201ENST00000516989 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
SCARNA6.1-201ENST00000516989 KCNH8Q96L42 1107 aa9.17□□□□□ -0.94
SCARNA6.1-201ENST00000516989 UHRF1BP1LA0JNW5 1464 aa9.16□□□□□ -0.94
SCARNA6.1-201ENST00000516989 CHRM1P11229 460 aaPredicted RBP9.16□□□□□ -0.94
SCARNA6.1-201ENST00000516989 ADCY10Q96PN6 1610 aa9.16□□□□□ -0.94
SCARNA6.1-201ENST00000516989 ABCC2Q92887 1545 aa9.15□□□□□ -0.94
SCARNA6.1-201ENST00000516989 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
SCARNA6.1-201ENST00000516989 FAM69CQ0P6D2 419 aa9.15□□□□□ -0.94
SCARNA6.1-201ENST00000516989 ABCA8O94911 1581 aa9.15□□□□□ -0.95
SCARNA6.1-201ENST00000516989 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
SCARNA6.1-201ENST00000516989 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
SCARNA6.1-201ENST00000516989 ATP10BO94823 1461 aa9.14□□□□□ -0.95
SCARNA6.1-201ENST00000516989 CDK11AQ9UQ88 783 aaPredicted RBP9.13□□□□□ -0.95
SCARNA6.1-201ENST00000516989 KDM5BQ9UGL1 1544 aa9.13□□□□□ -0.95
SCARNA6.1-201ENST00000516989 ASXL2Q76L83 1435 aa9.13□□□□□ -0.95
SCARNA6.1-201ENST00000516989 SGIP1Q9BQI5 828 aa9.11□□□□□ -0.95
SCARNA6.1-201ENST00000516989 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
SCARNA6.1-201ENST00000516989 NUP153P49790 1475 aaKnown RBP9.1□□□□□ -0.95
SCARNA6.1-201ENST00000516989 STK24Q9Y6E0 443 aa9.1□□□□□ -0.95
SCARNA6.1-201ENST00000516989 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
SCARNA6.1-201ENST00000516989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.09□□□□□ -0.95
SCARNA6.1-201ENST00000516989 PYGBP11216 843 aa9.09□□□□□ -0.95
SCARNA6.1-201ENST00000516989 ZFP91Q96JP5 570 aaPredicted RBP9.09□□□□□ -0.95
SCARNA6.1-201ENST00000516989 BCL11BQ9C0K0 894 aaPredicted RBP9.09□□□□□ -0.95
SCARNA6.1-201ENST00000516989 ZCCHC11Q5TAX3 1644 aaKnown RBP9.08□□□□□ -0.96
SCARNA6.1-201ENST00000516989 ABCC10Q5T3U5 1492 aa9.08□□□□□ -0.96
SCARNA6.1-201ENST00000516989 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
SCARNA6.1-201ENST00000516989 EPRSP07814 1512 aaKnown RBP9.07□□□□□ -0.96
SCARNA6.1-201ENST00000516989 VPS8Q8N3P4 1428 aa9.06□□□□□ -0.96
SCARNA6.1-201ENST00000516989 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
SCARNA6.1-201ENST00000516989 WDR7Q9Y4E6 1490 aa9.06□□□□□ -0.96
SCARNA6.1-201ENST00000516989 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
SCARNA6.1-201ENST00000516989 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
SCARNA6.1-201ENST00000516989 FYCO1Q9BQS8 1478 aa9.04□□□□□ -0.96
SCARNA6.1-201ENST00000516989 PCF11O94913 1555 aaKnown RBP9.03□□□□□ -0.96
SCARNA6.1-201ENST00000516989 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.96
SCARNA6.1-201ENST00000516989 CD109Q6YHK3 1445 aa9.02□□□□□ -0.97
SCARNA6.1-201ENST00000516989 MTUS2Q5JR59 1369 aa9.01□□□□□ -0.97
SCARNA6.1-201ENST00000516989 PITPNM1O00562 1244 aa9.01□□□□□ -0.97
SCARNA6.1-201ENST00000516989 TROQ12816 1431 aaPredicted RBP9.01□□□□□ -0.97
SCARNA6.1-201ENST00000516989 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
SCARNA6.1-201ENST00000516989 DIP2BQ9P265 1576 aa9□□□□□ -0.97
SCARNA6.1-201ENST00000516989 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
SCARNA6.1-201ENST00000516989 GLI2P10070 1586 aa8.99□□□□□ -0.97
SCARNA6.1-201ENST00000516989 EFCAB2Q5VUJ9 269 aa8.98□□□□□ -0.97
SCARNA6.1-201ENST00000516989 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
SCARNA6.1-201ENST00000516989 KIF13AQ9H1H9 1805 aa8.98□□□□□ -0.97
SCARNA6.1-201ENST00000516989 TSPOAP1O95153 1857 aa8.97□□□□□ -0.97
SCARNA6.1-201ENST00000516989 LRRIQ1Q96JM4 1722 aa8.97□□□□□ -0.97
SCARNA6.1-201ENST00000516989 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.98
SCARNA6.1-201ENST00000516989 CFDP1Q9UEE9 299 aaPredicted RBP8.96□□□□□ -0.98
SCARNA6.1-201ENST00000516989 MAGI3Q5TCQ9 1506 aa8.95□□□□□ -0.98
SCARNA6.1-201ENST00000516989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.95□□□□□ -0.98
SCARNA6.1-201ENST00000516989 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
SCARNA6.1-201ENST00000516989 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
SCARNA6.1-201ENST00000516989 PLCH2O75038 1416 aa8.95□□□□□ -0.98
SCARNA6.1-201ENST00000516989 TEX14Q8IWB6 1497 aa8.95□□□□□ -0.98
SCARNA6.1-201ENST00000516989 TIAM1Q13009 1591 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms