RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 PLCH2O75038 1416 aa9.82□□□□□ -0.84
RN7SKP238-201ENST00000516483 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
RN7SKP238-201ENST00000516483 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 FYCO1Q9BQS8 1478 aa9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 EFCAB2Q5VUJ9 269 aa9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 ZFYVE16Q7Z3T8 1539 aa9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 CEP162Q5TB80 1403 aa9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
RN7SKP238-201ENST00000516483 CCDC18Q5T9S5 1454 aa9.8□□□□□ -0.84
RN7SKP238-201ENST00000516483 MADDQ8WXG6 1647 aa9.8□□□□□ -0.84
RN7SKP238-201ENST00000516483 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
RN7SKP238-201ENST00000516483 AFAP1Q8N556 730 aa9.79□□□□□ -0.84
RN7SKP238-201ENST00000516483 BCORL1Q5H9F3 1711 aa9.78□□□□□ -0.84
RN7SKP238-201ENST00000516483 CDC42BPBQ9Y5S2 1711 aa9.78□□□□□ -0.84
RN7SKP238-201ENST00000516483 PTPRMP28827 1452 aa9.78□□□□□ -0.84
RN7SKP238-201ENST00000516483 ADAMTSL3P82987 1691 aa9.77□□□□□ -0.84
RN7SKP238-201ENST00000516483 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.84
RN7SKP238-201ENST00000516483 ZMYM4Q5VZL5 1548 aa9.77□□□□□ -0.84
RN7SKP238-201ENST00000516483 PREX2Q70Z35 1606 aa9.76□□□□□ -0.85
RN7SKP238-201ENST00000516483 MTUS2Q5JR59 1369 aa9.75□□□□□ -0.85
RN7SKP238-201ENST00000516483 TRAPPC8Q9Y2L5 1435 aa9.75□□□□□ -0.85
RN7SKP238-201ENST00000516483 CDC42BPAQ5VT25 1732 aa9.75□□□□□ -0.85
RN7SKP238-201ENST00000516483 ZNF518AQ6AHZ1 1483 aa9.74□□□□□ -0.85
RN7SKP238-201ENST00000516483 ABCC1P33527 1531 aa9.74□□□□□ -0.85
RN7SKP238-201ENST00000516483 ARHGEF12Q9NZN5 1544 aa9.74□□□□□ -0.85
RN7SKP238-201ENST00000516483 SYCP2Q9BX26 1530 aa9.73□□□□□ -0.85
RN7SKP238-201ENST00000516483 ITSN2Q9NZM3 1697 aa9.73□□□□□ -0.85
RN7SKP238-201ENST00000516483 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
RN7SKP238-201ENST00000516483 ATP10AO60312 1499 aa9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 SAMD9LQ8IVG5 1584 aa9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 HNRNPMP52272 730 aaKnown RBP eCLIP9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 FER1L4A9Z1Z3 1794 aa9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 CCNB3Q8WWL7 1395 aa9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 MAGI2Q86UL8 1455 aa9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 GPATCH8Q9UKJ3 1502 aaKnown RBP9.72□□□□□ -0.85
RN7SKP238-201ENST00000516483 KDM5CP41229 1560 aa9.71□□□□□ -0.85
RN7SKP238-201ENST00000516483 CEBPAP49715 358 aaPredicted RBP9.71□□□□□ -0.86
RN7SKP238-201ENST00000516483 HSPA2P54652 639 aa9.71□□□□□ -0.86
RN7SKP238-201ENST00000516483 CFDP1Q9UEE9 299 aaPredicted RBP9.71□□□□□ -0.86
RN7SKP238-201ENST00000516483 ZNF644Q9H582 1327 aaPredicted RBP9.71□□□□□ -0.86
RN7SKP238-201ENST00000516483 DIP2CQ9Y2E4 1556 aa9.71□□□□□ -0.86
RN7SKP238-201ENST00000516483 EHBP1L1Q8N3D4 1523 aa9.69□□□□□ -0.86
RN7SKP238-201ENST00000516483 TIAM1Q13009 1591 aa9.68□□□□□ -0.86
RN7SKP238-201ENST00000516483 LMTK3Q96Q04 1460 aa9.67□□□□□ -0.86
RN7SKP238-201ENST00000516483 SPAG9O60271 1321 aaKnown RBP9.67□□□□□ -0.86
RN7SKP238-201ENST00000516483 KIDINS220Q9ULH0 1771 aa9.67□□□□□ -0.86
RN7SKP238-201ENST00000516483 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
RN7SKP238-201ENST00000516483 NCOA2Q15596 1464 aa9.66□□□□□ -0.86
RN7SKP238-201ENST00000516483 MLH3Q9UHC1 1453 aa9.66□□□□□ -0.86
RN7SKP238-201ENST00000516483 ESF1Q9H501 851 aaKnown RBP9.65□□□□□ -0.86
RN7SKP238-201ENST00000516483 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.87
RN7SKP238-201ENST00000516483 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
RN7SKP238-201ENST00000516483 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
RN7SKP238-201ENST00000516483 ATP7AQ04656 1500 aa9.64□□□□□ -0.87
RN7SKP238-201ENST00000516483 CAMSAP2Q08AD1 1489 aa9.62□□□□□ -0.87
RN7SKP238-201ENST00000516483 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
RN7SKP238-201ENST00000516483 INO80Q9ULG1 1556 aaPredicted RBP9.62□□□□□ -0.87
RN7SKP238-201ENST00000516483 LRRC9Q6ZRR7 1453 aa9.61□□□□□ -0.87
RN7SKP238-201ENST00000516483 GGT6Q6P531 493 aa9.61□□□□□ -0.87
RN7SKP238-201ENST00000516483 REREQ9P2R6 1566 aa9.6□□□□□ -0.87
RN7SKP238-201ENST00000516483 KIAA1107Q9UPP5 1409 aa9.6□□□□□ -0.87
RN7SKP238-201ENST00000516483 C3P01024 1663 aa9.6□□□□□ -0.87
RN7SKP238-201ENST00000516483 A2MP01023 1474 aa9.59□□□□□ -0.87
RN7SKP238-201ENST00000516483 AGLP35573 1532 aa9.59□□□□□ -0.87
RN7SKP238-201ENST00000516483 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
RN7SKP238-201ENST00000516483 PREX1Q8TCU6 1659 aa9.58□□□□□ -0.88
RN7SKP238-201ENST00000516483 APLP2Q06481 763 aa9.58□□□□□ -0.88
RN7SKP238-201ENST00000516483 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
RN7SKP238-201ENST00000516483 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
RN7SKP238-201ENST00000516483 UHRF1BP1Q6BDS2 1440 aa9.57□□□□□ -0.88
RN7SKP238-201ENST00000516483 PLXNC1O60486 1568 aa9.57□□□□□ -0.88
RN7SKP238-201ENST00000516483 ADGBQ8N7X0 1667 aa9.56□□□□□ -0.88
RN7SKP238-201ENST00000516483 KIF3BO15066 747 aa9.56□□□□□ -0.88
RN7SKP238-201ENST00000516483 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
RN7SKP238-201ENST00000516483 MYOM3Q5VTT5 1437 aa9.54□□□□□ -0.88
RN7SKP238-201ENST00000516483 CNTLNQ9NXG0 1405 aa9.54□□□□□ -0.88
RN7SKP238-201ENST00000516483 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
RN7SKP238-201ENST00000516483 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
RN7SKP238-201ENST00000516483 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
RN7SKP238-201ENST00000516483 DHX29Q7Z478 1369 aaKnown RBP9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 ARHGEF5Q12774 1597 aa9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 STRCQ7RTU9 1775 aa9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 CHIC2Q9UKJ5 165 aa9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 MROH2AA6NES4 1674 aa9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
RN7SKP238-201ENST00000516483 NCKAP5LQ9HCH0 1330 aa9.5□□□□□ -0.89
RN7SKP238-201ENST00000516483 WASHC2CQ9Y4E1 1318 aa9.5□□□□□ -0.89
RN7SKP238-201ENST00000516483 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
RN7SKP238-201ENST00000516483 MYO3AQ8NEV4 1616 aa9.49□□□□□ -0.89
RN7SKP238-201ENST00000516483 PTPN23Q9H3S7 1636 aa9.49□□□□□ -0.89
RN7SKP238-201ENST00000516483 PTPRKQ15262 1439 aa9.49□□□□□ -0.89
RN7SKP238-201ENST00000516483 FAM50AQ14320 339 aaKnown RBP9.49□□□□□ -0.89
RN7SKP238-201ENST00000516483 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
RN7SKP238-201ENST00000516483 CAMSAP1Q5T5Y3 1602 aa9.49□□□□□ -0.89
RN7SKP238-201ENST00000516483 NPATQ14207 1427 aa9.48□□□□□ -0.89
RN7SKP238-201ENST00000516483 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms