RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
RNU4-29P-201ENST00000515943 KIF3CO14782 793 aa8.59□□□□□ -1.03
RNU4-29P-201ENST00000515943 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
RNU4-29P-201ENST00000515943 CFAP44Q96MT7 982 aa8.58□□□□□ -1.04
RNU4-29P-201ENST00000515943 C2orf72A6NCS6 295 aa8.57□□□□□ -1.04
RNU4-29P-201ENST00000515943 SNPHO15079 494 aa8.55□□□□□ -1.04
RNU4-29P-201ENST00000515943 TMC2Q8TDI7 906 aa8.55□□□□□ -1.04
RNU4-29P-201ENST00000515943 CADPS2Q86UW7 1296 aa8.54□□□□□ -1.04
RNU4-29P-201ENST00000515943 CRISPLD2Q9H0B8 497 aa8.54□□□□□ -1.04
RNU4-29P-201ENST00000515943 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
RNU4-29P-201ENST00000515943 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
RNU4-29P-201ENST00000515943 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
RNU4-29P-201ENST00000515943 NCKAP5LQ9HCH0 1330 aa8.53□□□□□ -1.04
RNU4-29P-201ENST00000515943 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
RNU4-29P-201ENST00000515943 FOXK1P85037 733 aa8.5□□□□□ -1.05
RNU4-29P-201ENST00000515943 DSG2Q14126 1118 aa8.49□□□□□ -1.05
RNU4-29P-201ENST00000515943 DOK7Q18PE1 504 aa8.49□□□□□ -1.05
RNU4-29P-201ENST00000515943 ST18O60284 1047 aa8.48□□□□□ -1.05
RNU4-29P-201ENST00000515943 PDE4AP27815 886 aa8.48□□□□□ -1.05
RNU4-29P-201ENST00000515943 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
RNU4-29P-201ENST00000515943 MFSD10Q14728 455 aa8.47□□□□□ -1.05
RNU4-29P-201ENST00000515943 PLPP6Q8IY26 295 aa8.46□□□□□ -1.06
RNU4-29P-201ENST00000515943 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
RNU4-29P-201ENST00000515943 LARP6Q9BRS8 491 aaKnown RBP8.45□□□□□ -1.06
RNU4-29P-201ENST00000515943 RIMBP2O15034 1052 aa8.44□□□□□ -1.06
RNU4-29P-201ENST00000515943 SLC34A2O95436 690 aa8.44□□□□□ -1.06
RNU4-29P-201ENST00000515943 ZNF710Q8N1W2 664 aa8.44□□□□□ -1.06
RNU4-29P-201ENST00000515943 DDX27Q96GQ7 796 aaKnown RBP8.44□□□□□ -1.06
RNU4-29P-201ENST00000515943 ZSWIM6Q9HCJ5 1215 aa8.44□□□□□ -1.06
RNU4-29P-201ENST00000515943 TSHZ2Q9NRE2 1034 aa8.43□□□□□ -1.06
RNU4-29P-201ENST00000515943 HOXB1P14653 301 aaPredicted RBP8.42□□□□□ -1.06
RNU4-29P-201ENST00000515943 GPR153Q6NV75 609 aa8.41□□□□□ -1.06
RNU4-29P-201ENST00000515943 CDAN1Q8IWY9 1227 aa8.4□□□□□ -1.06
RNU4-29P-201ENST00000515943 PTCD2Q8WV60 388 aaKnown RBP8.39□□□□□ -1.07
RNU4-29P-201ENST00000515943 PCDHGA4Q9Y5G9 962 aa8.39□□□□□ -1.07
RNU4-29P-201ENST00000515943 ARSIQ5FYB1 569 aa8.38□□□□□ -1.07
RNU4-29P-201ENST00000515943 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
RNU4-29P-201ENST00000515943 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
RNU4-29P-201ENST00000515943 EMP3P54852 163 aa8.36□□□□□ -1.07
RNU4-29P-201ENST00000515943 CAMK2BQ13554 666 aa8.36□□□□□ -1.07
RNU4-29P-201ENST00000515943 KHSRPQ92945 711 aaKnown RBP eCLIP8.36□□□□□ -1.07
RNU4-29P-201ENST00000515943 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
RNU4-29P-201ENST00000515943 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
RNU4-29P-201ENST00000515943 KDM4FA0A1W2PPD8 638 aa8.33□□□□□ -1.08
RNU4-29P-201ENST00000515943 NUDT7P0C024 238 aa8.33□□□□□ -1.08
RNU4-29P-201ENST00000515943 HAP1P54257 671 aaPredicted RBP8.33□□□□□ -1.08
RNU4-29P-201ENST00000515943 TBC1D12O60347 775 aa8.31□□□□□ -1.08
RNU4-29P-201ENST00000515943 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
RNU4-29P-201ENST00000515943 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
RNU4-29P-201ENST00000515943 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
RNU4-29P-201ENST00000515943 HS3ST6Q96QI5 342 aa8.3□□□□□ -1.08
RNU4-29P-201ENST00000515943 POTEB3A0JP26 581 aa8.29□□□□□ -1.08
RNU4-29P-201ENST00000515943 E2F4Q16254 413 aa8.29□□□□□ -1.08
RNU4-29P-201ENST00000515943 POTEBQ6S5H4 581 aa8.29□□□□□ -1.08
RNU4-29P-201ENST00000515943 ERBB3P21860 1342 aa8.29□□□□□ -1.08
RNU4-29P-201ENST00000515943 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
RNU4-29P-201ENST00000515943 LHX6Q9UPM6 363 aa8.27□□□□□ -1.09
RNU4-29P-201ENST00000515943 DPYSL4O14531 572 aa8.26□□□□□ -1.09
RNU4-29P-201ENST00000515943 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
RNU4-29P-201ENST00000515943 EVI5O60447 810 aa8.25□□□□□ -1.09
RNU4-29P-201ENST00000515943 ARIH1Q9Y4X5 557 aaPredicted RBP8.25□□□□□ -1.09
RNU4-29P-201ENST00000515943 MMRN1Q13201 1228 aa8.24□□□□□ -1.09
RNU4-29P-201ENST00000515943 ANO8Q9HCE9 1232 aaPredicted RBP8.24□□□□□ -1.09
RNU4-29P-201ENST00000515943 KCNV2Q8TDN2 545 aa8.23□□□□□ -1.09
RNU4-29P-201ENST00000515943 KDM2AQ9Y2K7 1162 aa8.23□□□□□ -1.09
RNU4-29P-201ENST00000515943 PSDA5PKW4 1024 aaPredicted RBP8.22□□□□□ -1.09
RNU4-29P-201ENST00000515943 PDIA6Q15084 440 aa8.22□□□□□ -1.09
RNU4-29P-201ENST00000515943 ZNF687Q8N1G0 1237 aa8.21□□□□□ -1.1
RNU4-29P-201ENST00000515943 VSIG10Q8N0Z9 540 aa8.2□□□□□ -1.1
RNU4-29P-201ENST00000515943 FOSBP53539 338 aa8.19□□□□□ -1.1
RNU4-29P-201ENST00000515943 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
RNU4-29P-201ENST00000515943 JPH4Q96JJ6 628 aa8.19□□□□□ -1.1
RNU4-29P-201ENST00000515943 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
RNU4-29P-201ENST00000515943 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
RNU4-29P-201ENST00000515943 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
RNU4-29P-201ENST00000515943 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
RNU4-29P-201ENST00000515943 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
RNU4-29P-201ENST00000515943 SPNS2Q8IVW8 549 aa8.17□□□□□ -1.1
RNU4-29P-201ENST00000515943 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
RNU4-29P-201ENST00000515943 PBX2P40425 430 aa8.15□□□□□ -1.1
RNU4-29P-201ENST00000515943 PTGER2P43116 358 aa8.15□□□□□ -1.1
RNU4-29P-201ENST00000515943 POTEEQ6S8J3 1075 aa8.15□□□□□ -1.1
RNU4-29P-201ENST00000515943 PHF14O94880 888 aa8.14□□□□□ -1.11
RNU4-29P-201ENST00000515943 PCDHGA10Q9Y5H3 936 aa8.14□□□□□ -1.11
RNU4-29P-201ENST00000515943 DDX12PQ92771 950 aa8.12□□□□□ -1.11
RNU4-29P-201ENST00000515943 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
RNU4-29P-201ENST00000515943 BCL2L12Q9HB09 334 aa8.12□□□□□ -1.11
RNU4-29P-201ENST00000515943 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
RNU4-29P-201ENST00000515943 EPAS1Q99814 870 aa8.11□□□□□ -1.11
RNU4-29P-201ENST00000515943 ADAM33Q9BZ11 813 aa8.11□□□□□ -1.11
RNU4-29P-201ENST00000515943 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
RNU4-29P-201ENST00000515943 ARHGAP33O14559 1287 aa8.1□□□□□ -1.11
RNU4-29P-201ENST00000515943 FBXW7Q969H0 707 aa8.1□□□□□ -1.11
RNU4-29P-201ENST00000515943 LSM11P83369 360 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU4-29P-201ENST00000515943 KCNK17Q96T54 332 aa8.09□□□□□ -1.11
RNU4-29P-201ENST00000515943 PSEN2P49810 448 aa8.08□□□□□ -1.12
RNU4-29P-201ENST00000515943 NBR1Q14596 966 aa8.08□□□□□ -1.12
RNU4-29P-201ENST00000515943 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
RNU4-29P-201ENST00000515943 PTPREP23469 700 aa8.07□□□□□ -1.12
RNU4-29P-201ENST00000515943 DMRTA1Q5VZB9 504 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms