RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
RACK1-234ENST00000515417 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
RACK1-234ENST00000515417 TIAM1Q13009 1591 aa15.37■□□□□ 0.05
RACK1-234ENST00000515417 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
RACK1-234ENST00000515417 FRMPD1Q5SYB0 1578 aa15.36■□□□□ 0.05
RACK1-234ENST00000515417 DENND4BO75064 1496 aaPredicted RBP15.36■□□□□ 0.05
RACK1-234ENST00000515417 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
RACK1-234ENST00000515417 SCAPERQ9BY12 1400 aa15.35■□□□□ 0.05
RACK1-234ENST00000515417 CFAP74Q9C0B2 1584 aa15.35■□□□□ 0.05
RACK1-234ENST00000515417 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
RACK1-234ENST00000515417 HSPA2P54652 639 aa15.34■□□□□ 0.05
RACK1-234ENST00000515417 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
RACK1-234ENST00000515417 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
RACK1-234ENST00000515417 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.05
RACK1-234ENST00000515417 PREX2Q70Z35 1606 aa15.33■□□□□ 0.04
RACK1-234ENST00000515417 MADDQ8WXG6 1647 aa15.33■□□□□ 0.04
RACK1-234ENST00000515417 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.04
RACK1-234ENST00000515417 CDC42BPBQ9Y5S2 1711 aa15.32■□□□□ 0.04
RACK1-234ENST00000515417 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
RACK1-234ENST00000515417 POGZQ7Z3K3 1410 aa15.31■□□□□ 0.04
RACK1-234ENST00000515417 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
RACK1-234ENST00000515417 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
RACK1-234ENST00000515417 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
RACK1-234ENST00000515417 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
RACK1-234ENST00000515417 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
RACK1-234ENST00000515417 LMTK3Q96Q04 1460 aa15.29■□□□□ 0.04
RACK1-234ENST00000515417 CFDP1Q9UEE9 299 aaPredicted RBP15.29■□□□□ 0.04
RACK1-234ENST00000515417 RICTORQ6R327 1708 aa15.29■□□□□ 0.04
RACK1-234ENST00000515417 APLP2Q06481 763 aa15.28■□□□□ 0.04
RACK1-234ENST00000515417 AFAP1Q8N556 730 aa15.28■□□□□ 0.04
RACK1-234ENST00000515417 ABCC1P33527 1531 aa15.27■□□□□ 0.04
RACK1-234ENST00000515417 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.04
RACK1-234ENST00000515417 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
RACK1-234ENST00000515417 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
RACK1-234ENST00000515417 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
RACK1-234ENST00000515417 RIMS1Q86UR5 1692 aaKnown RBP15.26■□□□□ 0.03
RACK1-234ENST00000515417 MLECQ14165 292 aa15.26■□□□□ 0.03
RACK1-234ENST00000515417 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
RACK1-234ENST00000515417 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
RACK1-234ENST00000515417 ZMYM4Q5VZL5 1548 aa15.25■□□□□ 0.03
RACK1-234ENST00000515417 ARHGEF40Q8TER5 1519 aa15.25■□□□□ 0.03
RACK1-234ENST00000515417 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
RACK1-234ENST00000515417 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.032e-9■■■□□ 17.5
RACK1-234ENST00000515417 ZFYVE16Q7Z3T8 1539 aa15.23■□□□□ 0.03
RACK1-234ENST00000515417 ZNF518AQ6AHZ1 1483 aa15.23■□□□□ 0.03
RACK1-234ENST00000515417 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
RACK1-234ENST00000515417 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
RACK1-234ENST00000515417 KDM5CP41229 1560 aa15.2■□□□□ 0.02
RACK1-234ENST00000515417 PPARGC1BQ86YN6 1023 aaKnown RBP15.18■□□□□ 0.02
RACK1-234ENST00000515417 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
RACK1-234ENST00000515417 MAGI2Q86UL8 1455 aa15.18■□□□□ 0.02
RACK1-234ENST00000515417 PLEKHH2Q8IVE3 1493 aa15.18■□□□□ 0.02
RACK1-234ENST00000515417 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
RACK1-234ENST00000515417 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
RACK1-234ENST00000515417 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
RACK1-234ENST00000515417 SPAG9O60271 1321 aaKnown RBP15.16■□□□□ 0.02
RACK1-234ENST00000515417 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
RACK1-234ENST00000515417 DIP2CQ9Y2E4 1556 aa15.15■□□□□ 0.02
RACK1-234ENST00000515417 ATP10AO60312 1499 aa15.14■□□□□ 0.01
RACK1-234ENST00000515417 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
RACK1-234ENST00000515417 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
RACK1-234ENST00000515417 CERKQ8TCT0 537 aa15.14■□□□□ 0.01
RACK1-234ENST00000515417 C9orf84Q5VXU9 1444 aa15.14■□□□□ 0.01
RACK1-234ENST00000515417 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
RACK1-234ENST00000515417 ATP7AQ04656 1500 aa15.11■□□□□ 0.01
RACK1-234ENST00000515417 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
RACK1-234ENST00000515417 FGD6Q6ZV73 1430 aa15.09■□□□□ 0.01
RACK1-234ENST00000515417 MIA2Q96PC5 1412 aa15.09■□□□□ 0.01
RACK1-234ENST00000515417 ILDR2Q71H61 639 aa15.09■□□□□ 0.01
RACK1-234ENST00000515417 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
RACK1-234ENST00000515417 FER1L4A9Z1Z3 1794 aa15.07■□□□□ 0
RACK1-234ENST00000515417 PTPN23Q9H3S7 1636 aa15.06■□□□□ 0
RACK1-234ENST00000515417 ARHGEF5Q12774 1597 aa15.06■□□□□ 0
RACK1-234ENST00000515417 REREQ9P2R6 1566 aa15.03■□□□□ -0
RACK1-234ENST00000515417 A2MP01023 1474 aa15.03■□□□□ -0
RACK1-234ENST00000515417 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
RACK1-234ENST00000515417 TCOF1Q13428 1488 aaKnown RBP15.02■□□□□ -0
RACK1-234ENST00000515417 RTEL1-TNFRSF6BF6WH68 1400 aa15.02■□□□□ -0
RACK1-234ENST00000515417 TSPY4P0CV99 314 aa15.02■□□□□ -0
RACK1-234ENST00000515417 TSPY10P0CW01 314 aa15.02■□□□□ -0
RACK1-234ENST00000515417 STRCQ7RTU9 1775 aa15.02□□□□□ -0.01
RACK1-234ENST00000515417 ABCC5O15440 1437 aa15.01□□□□□ -0.01
RACK1-234ENST00000515417 RSPH4AQ5TD94 716 aa15.01□□□□□ -0.01
RACK1-234ENST00000515417 AGLP35573 1532 aa15.01□□□□□ -0.01
RACK1-234ENST00000515417 PLXNC1O60486 1568 aa15□□□□□ -0.01
RACK1-234ENST00000515417 CHIC2Q9UKJ5 165 aa14.99□□□□□ -0.01
RACK1-234ENST00000515417 DAPK1P53355 1430 aa14.99□□□□□ -0.01
RACK1-234ENST00000515417 DHX29Q7Z478 1369 aaKnown RBP14.98□□□□□ -0.01
RACK1-234ENST00000515417 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
RACK1-234ENST00000515417 ADGBQ8N7X0 1667 aa14.97□□□□□ -0.01
RACK1-234ENST00000515417 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
RACK1-234ENST00000515417 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
RACK1-234ENST00000515417 GGT6Q6P531 493 aa14.96□□□□□ -0.01
RACK1-234ENST00000515417 MAST1Q9Y2H9 1570 aa14.96□□□□□ -0.01
RACK1-234ENST00000515417 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
RACK1-234ENST00000515417 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
RACK1-234ENST00000515417 CROCC2H7BZ55 1655 aa14.94□□□□□ -0.02
RACK1-234ENST00000515417 KIF3BO15066 747 aa14.94□□□□□ -0.02
RACK1-234ENST00000515417 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
RACK1-234ENST00000515417 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms