RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 ARHGAP5Q13017 1502 aa20.95■□□□□ 0.94
CDK7-213ENST00000515391 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
CDK7-213ENST00000515391 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
CDK7-213ENST00000515391 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
CDK7-213ENST00000515391 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
CDK7-213ENST00000515391 PREX2Q70Z35 1606 aa20.89■□□□□ 0.93
CDK7-213ENST00000515391 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
CDK7-213ENST00000515391 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
CDK7-213ENST00000515391 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
CDK7-213ENST00000515391 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
CDK7-213ENST00000515391 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
CDK7-213ENST00000515391 ZFYVE16Q7Z3T8 1539 aa20.86■□□□□ 0.93
CDK7-213ENST00000515391 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
CDK7-213ENST00000515391 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
CDK7-213ENST00000515391 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.92
CDK7-213ENST00000515391 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
CDK7-213ENST00000515391 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
CDK7-213ENST00000515391 ADAMTSL3P82987 1691 aa20.81■□□□□ 0.92
CDK7-213ENST00000515391 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
CDK7-213ENST00000515391 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
CDK7-213ENST00000515391 ABCC1P33527 1531 aa20.8■□□□□ 0.92
CDK7-213ENST00000515391 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
CDK7-213ENST00000515391 ZNF518AQ6AHZ1 1483 aa20.8■□□□□ 0.92
CDK7-213ENST00000515391 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
CDK7-213ENST00000515391 CCNB3Q8WWL7 1395 aa20.79■□□□□ 0.92
CDK7-213ENST00000515391 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
CDK7-213ENST00000515391 ITSN2Q9NZM3 1697 aa20.77■□□□□ 0.92
CDK7-213ENST00000515391 KDM5CP41229 1560 aa20.77■□□□□ 0.92
CDK7-213ENST00000515391 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.92
CDK7-213ENST00000515391 MLECQ14165 292 aa20.77■□□□□ 0.92
CDK7-213ENST00000515391 CFDP1Q9UEE9 299 aaPredicted RBP20.77■□□□□ 0.92
CDK7-213ENST00000515391 ATP10AO60312 1499 aa20.75■□□□□ 0.91
CDK7-213ENST00000515391 MADDQ8WXG6 1647 aa20.75■□□□□ 0.91
CDK7-213ENST00000515391 HNRNPMP52272 730 aaKnown RBP eCLIP20.75■□□□□ 0.912e-9■■■■■ 32.2
CDK7-213ENST00000515391 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
CDK7-213ENST00000515391 HECW2Q9P2P5 1572 aa20.73■□□□□ 0.91
CDK7-213ENST00000515391 PTPRMP28827 1452 aa20.73■□□□□ 0.91
CDK7-213ENST00000515391 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
CDK7-213ENST00000515391 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
CDK7-213ENST00000515391 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
CDK7-213ENST00000515391 MLH3Q9UHC1 1453 aa20.7■□□□□ 0.9
CDK7-213ENST00000515391 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
CDK7-213ENST00000515391 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
CDK7-213ENST00000515391 ABCA6Q8N139 1617 aa20.7■□□□□ 0.9
CDK7-213ENST00000515391 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.9
CDK7-213ENST00000515391 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
CDK7-213ENST00000515391 KANK4Q5T7N3 995 aaPredicted RBP20.68■□□□□ 0.9
CDK7-213ENST00000515391 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
CDK7-213ENST00000515391 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
CDK7-213ENST00000515391 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
CDK7-213ENST00000515391 KIAA1107Q9UPP5 1409 aa20.65■□□□□ 0.9
CDK7-213ENST00000515391 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.89
CDK7-213ENST00000515391 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
CDK7-213ENST00000515391 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
CDK7-213ENST00000515391 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
CDK7-213ENST00000515391 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
CDK7-213ENST00000515391 REREQ9P2R6 1566 aa20.59■□□□□ 0.89
CDK7-213ENST00000515391 MBD5Q9P267 1494 aa20.59■□□□□ 0.89
CDK7-213ENST00000515391 ATP7AQ04656 1500 aa20.58■□□□□ 0.89
CDK7-213ENST00000515391 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
CDK7-213ENST00000515391 INO80Q9ULG1 1556 aaPredicted RBP20.56■□□□□ 0.88
CDK7-213ENST00000515391 CEBPAP49715 358 aaPredicted RBP20.56■□□□□ 0.88
CDK7-213ENST00000515391 APLP2Q06481 763 aa20.56■□□□□ 0.88
CDK7-213ENST00000515391 AGLP35573 1532 aa20.55■□□□□ 0.88
CDK7-213ENST00000515391 A2MP01023 1474 aa20.5■□□□□ 0.87
CDK7-213ENST00000515391 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
CDK7-213ENST00000515391 MYOM3Q5VTT5 1437 aa20.48■□□□□ 0.87
CDK7-213ENST00000515391 LMTK3Q96Q04 1460 aa20.48■□□□□ 0.87
CDK7-213ENST00000515391 HSPA2P54652 639 aa20.47■□□□□ 0.87
CDK7-213ENST00000515391 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
CDK7-213ENST00000515391 RTEL1-TNFRSF6BF6WH68 1400 aa20.46■□□□□ 0.87
CDK7-213ENST00000515391 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
CDK7-213ENST00000515391 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
CDK7-213ENST00000515391 RSPH4AQ5TD94 716 aa20.45■□□□□ 0.86
CDK7-213ENST00000515391 ARHGEF5Q12774 1597 aa20.44■□□□□ 0.86
CDK7-213ENST00000515391 GGT6Q6P531 493 aa20.44■□□□□ 0.86
CDK7-213ENST00000515391 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
CDK7-213ENST00000515391 C3P01024 1663 aa20.42■□□□□ 0.86
CDK7-213ENST00000515391 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
CDK7-213ENST00000515391 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
CDK7-213ENST00000515391 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
CDK7-213ENST00000515391 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
CDK7-213ENST00000515391 KIF3BO15066 747 aa20.37■□□□□ 0.85
CDK7-213ENST00000515391 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
CDK7-213ENST00000515391 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
CDK7-213ENST00000515391 ZMYM3Q14202 1370 aa20.36■□□□□ 0.85
CDK7-213ENST00000515391 PREX1Q8TCU6 1659 aa20.36■□□□□ 0.85
CDK7-213ENST00000515391 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
CDK7-213ENST00000515391 MAST1Q9Y2H9 1570 aa20.34■□□□□ 0.85
CDK7-213ENST00000515391 MROH2AA6NES4 1674 aa20.33■□□□□ 0.85
CDK7-213ENST00000515391 SETD1BQ9UPS6 1966 aaKnown RBP20.32■□□□□ 0.84
CDK7-213ENST00000515391 ABCC5O15440 1437 aa20.32■□□□□ 0.84
CDK7-213ENST00000515391 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
CDK7-213ENST00000515391 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
CDK7-213ENST00000515391 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
CDK7-213ENST00000515391 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
CDK7-213ENST00000515391 DAPK1P53355 1430 aa20.27■□□□□ 0.84
CDK7-213ENST00000515391 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
CDK7-213ENST00000515391 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
CDK7-213ENST00000515391 RRP7BPQ9NSQ0 103 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms