RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
SNF8-214ENST00000515174 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
SNF8-214ENST00000515174 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
SNF8-214ENST00000515174 TEX14Q8IWB6 1497 aa15.26■□□□□ 0.03
SNF8-214ENST00000515174 PPRC1Q5VV67 1664 aaKnown RBP15.25■□□□□ 0.03
SNF8-214ENST00000515174 HECW2Q9P2P5 1572 aa15.25■□□□□ 0.03
SNF8-214ENST00000515174 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
SNF8-214ENST00000515174 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
SNF8-214ENST00000515174 WDR7Q9Y4E6 1490 aa15.24■□□□□ 0.03
SNF8-214ENST00000515174 CDC42BPBQ9Y5S2 1711 aa15.23■□□□□ 0.03
SNF8-214ENST00000515174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNF8-214ENST00000515174 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.03
SNF8-214ENST00000515174 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
SNF8-214ENST00000515174 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
SNF8-214ENST00000515174 SETD5Q9C0A6 1442 aa15.18■□□□□ 0.02
SNF8-214ENST00000515174 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
SNF8-214ENST00000515174 MAP3K4Q9Y6R4 1608 aa15.17■□□□□ 0.02
SNF8-214ENST00000515174 CROCC2H7BZ55 1655 aa15.16■□□□□ 0.02
SNF8-214ENST00000515174 KCNH8Q96L42 1107 aa15.16■□□□□ 0.02
SNF8-214ENST00000515174 DHX57Q6P158 1386 aaKnown RBP15.14■□□□□ 0.01
SNF8-214ENST00000515174 PLEKHD1A6NEE1 506 aa15.14■□□□□ 0.01
SNF8-214ENST00000515174 SAMD9LQ8IVG5 1584 aa15.14■□□□□ 0.01
SNF8-214ENST00000515174 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
SNF8-214ENST00000515174 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
SNF8-214ENST00000515174 RAB3GAP2Q9H2M9 1393 aa15.11■□□□□ 0.01
SNF8-214ENST00000515174 CD109Q6YHK3 1445 aa15.11■□□□□ 0.01
SNF8-214ENST00000515174 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
SNF8-214ENST00000515174 CAMSAP2Q08AD1 1489 aa15.1■□□□□ 0.01
SNF8-214ENST00000515174 FBXO41Q8TF61 875 aa15.1■□□□□ 0.01
SNF8-214ENST00000515174 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
SNF8-214ENST00000515174 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
SNF8-214ENST00000515174 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
SNF8-214ENST00000515174 ITGAEP38570 1179 aa15.09■□□□□ 0.01
SNF8-214ENST00000515174 CFAP74Q9C0B2 1584 aa15.09■□□□□ 0.01
SNF8-214ENST00000515174 ARAP3Q8WWN8 1544 aa15.08■□□□□ 0.01
SNF8-214ENST00000515174 ADGBQ8N7X0 1667 aa15.08■□□□□ 0
SNF8-214ENST00000515174 PTPRKQ15262 1439 aa15.08■□□□□ 0
SNF8-214ENST00000515174 ABCC1P33527 1531 aa15.07■□□□□ 0
SNF8-214ENST00000515174 SYCP2Q9BX26 1530 aa15.06■□□□□ 0
SNF8-214ENST00000515174 ROCK1Q13464 1354 aa15.05■□□□□ -0
SNF8-214ENST00000515174 GCC2Q8IWJ2 1684 aa15.03■□□□□ -0
SNF8-214ENST00000515174 NAIPQ13075 1403 aa15.03■□□□□ -0
SNF8-214ENST00000515174 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
SNF8-214ENST00000515174 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
SNF8-214ENST00000515174 PLCH2O75038 1416 aa15□□□□□ -0.01
SNF8-214ENST00000515174 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
SNF8-214ENST00000515174 ABCC5O15440 1437 aa14.99□□□□□ -0.01
SNF8-214ENST00000515174 DAPK1P53355 1430 aa14.99□□□□□ -0.01
SNF8-214ENST00000515174 ARID4BQ4LE39 1312 aaPredicted RBP14.98□□□□□ -0.01
SNF8-214ENST00000515174 FANCAO15360 1455 aa14.98□□□□□ -0.01
SNF8-214ENST00000515174 RSPH4AQ5TD94 716 aa14.98□□□□□ -0.01
SNF8-214ENST00000515174 RICTORQ6R327 1708 aa14.97□□□□□ -0.01
SNF8-214ENST00000515174 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.02
SNF8-214ENST00000515174 PTPRMP28827 1452 aa14.95□□□□□ -0.02
SNF8-214ENST00000515174 ZNF644Q9H582 1327 aaPredicted RBP14.95□□□□□ -0.02
SNF8-214ENST00000515174 MAST1Q9Y2H9 1570 aa14.95□□□□□ -0.02
SNF8-214ENST00000515174 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
SNF8-214ENST00000515174 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
SNF8-214ENST00000515174 RAPGEF3O95398 923 aa14.94□□□□□ -0.02
SNF8-214ENST00000515174 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
SNF8-214ENST00000515174 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
SNF8-214ENST00000515174 SHANK2Q9UPX8 1470 aa14.94□□□□□ -0.02
SNF8-214ENST00000515174 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
SNF8-214ENST00000515174 MBD5Q9P267 1494 aa14.93□□□□□ -0.02
SNF8-214ENST00000515174 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
SNF8-214ENST00000515174 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
SNF8-214ENST00000515174 PLXNC1O60486 1568 aa14.92□□□□□ -0.02
SNF8-214ENST00000515174 ZFYVE16Q7Z3T8 1539 aa14.92□□□□□ -0.02
SNF8-214ENST00000515174 NEO1Q92859 1461 aa14.91□□□□□ -0.02
SNF8-214ENST00000515174 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
SNF8-214ENST00000515174 KDM5CP41229 1560 aa14.9□□□□□ -0.02
SNF8-214ENST00000515174 RRP7BPQ9NSQ0 103 aa14.89□□□□□ -0.03
SNF8-214ENST00000515174 KIAA1107Q9UPP5 1409 aa14.89□□□□□ -0.03
SNF8-214ENST00000515174 KIDINS220Q9ULH0 1771 aa14.88□□□□□ -0.03
SNF8-214ENST00000515174 CHIC2Q9UKJ5 165 aa14.88□□□□□ -0.03
SNF8-214ENST00000515174 ADAMTSL3P82987 1691 aa14.87□□□□□ -0.03
SNF8-214ENST00000515174 C9orf84Q5VXU9 1444 aa14.87□□□□□ -0.03
SNF8-214ENST00000515174 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
SNF8-214ENST00000515174 ABCA6Q8N139 1617 aa14.87□□□□□ -0.03
SNF8-214ENST00000515174 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
SNF8-214ENST00000515174 ANKRD30AQ9BXX3 1397 aa14.86□□□□□ -0.03
SNF8-214ENST00000515174 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
SNF8-214ENST00000515174 TSPY4P0CV99 314 aa14.85□□□□□ -0.03
SNF8-214ENST00000515174 TSPY10P0CW01 314 aa14.85□□□□□ -0.03
SNF8-214ENST00000515174 EFCAB2Q5VUJ9 269 aa14.85□□□□□ -0.03
SNF8-214ENST00000515174 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
SNF8-214ENST00000515174 SCAPERQ9BY12 1400 aa14.83□□□□□ -0.03
SNF8-214ENST00000515174 ZMYM4Q5VZL5 1548 aa14.83□□□□□ -0.04
SNF8-214ENST00000515174 HSPA2P54652 639 aa14.83□□□□□ -0.04
SNF8-214ENST00000515174 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
SNF8-214ENST00000515174 ZNF518AQ6AHZ1 1483 aa14.82□□□□□ -0.04
SNF8-214ENST00000515174 LMTK3Q96Q04 1460 aa14.82□□□□□ -0.04
SNF8-214ENST00000515174 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
SNF8-214ENST00000515174 HNRNPMP52272 730 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNF8-214ENST00000515174 DIP2CQ9Y2E4 1556 aa14.81□□□□□ -0.04
SNF8-214ENST00000515174 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
SNF8-214ENST00000515174 DENND4BO75064 1496 aaPredicted RBP14.8□□□□□ -0.04
SNF8-214ENST00000515174 RIMS1Q86UR5 1692 aaKnown RBP14.79□□□□□ -0.04
SNF8-214ENST00000515174 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
SNF8-214ENST00000515174 MLECQ14165 292 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms