RNA–Protein interactions for RNA: ENST00000513735.5

PAPD4-214, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 5

Gene PAPD4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-214ENST00000513735 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
PAPD4-214ENST00000513735 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
PAPD4-214ENST00000513735 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
PAPD4-214ENST00000513735 TMEM92Q6UXU6 159 aa11.8□□□□□ -0.52
PAPD4-214ENST00000513735 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
PAPD4-214ENST00000513735 BCANQ96GW7 911 aa11.74□□□□□ -0.53
PAPD4-214ENST00000513735 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
PAPD4-214ENST00000513735 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
PAPD4-214ENST00000513735 KIF3CO14782 793 aa11.67□□□□□ -0.54
PAPD4-214ENST00000513735 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
PAPD4-214ENST00000513735 SNPHO15079 494 aa11.65□□□□□ -0.54
PAPD4-214ENST00000513735 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-214ENST00000513735 ST18O60284 1047 aa11.62□□□□□ -0.55
PAPD4-214ENST00000513735 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
PAPD4-214ENST00000513735 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
PAPD4-214ENST00000513735 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
PAPD4-214ENST00000513735 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
PAPD4-214ENST00000513735 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
PAPD4-214ENST00000513735 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
PAPD4-214ENST00000513735 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
PAPD4-214ENST00000513735 POTEMA6NI47 508 aa11.53□□□□□ -0.56
PAPD4-214ENST00000513735 FOXK1P85037 733 aa11.53□□□□□ -0.56
PAPD4-214ENST00000513735 DSG2Q14126 1118 aa11.52□□□□□ -0.57
PAPD4-214ENST00000513735 POTEGQ6S5H5 508 aa11.52□□□□□ -0.57
PAPD4-214ENST00000513735 PDE4AP27815 886 aa11.5□□□□□ -0.57
PAPD4-214ENST00000513735 PLPP6Q8IY26 295 aa11.5□□□□□ -0.57
PAPD4-214ENST00000513735 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
PAPD4-214ENST00000513735 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
PAPD4-214ENST00000513735 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
PAPD4-214ENST00000513735 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
PAPD4-214ENST00000513735 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
PAPD4-214ENST00000513735 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
PAPD4-214ENST00000513735 SLC34A2O95436 690 aa11.46□□□□□ -0.57
PAPD4-214ENST00000513735 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
PAPD4-214ENST00000513735 MFSD10Q14728 455 aa11.45□□□□□ -0.58
PAPD4-214ENST00000513735 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
PAPD4-214ENST00000513735 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
PAPD4-214ENST00000513735 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
PAPD4-214ENST00000513735 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.588e-8■■■■■ 32.5
PAPD4-214ENST00000513735 EMP3P54852 163 aa11.42□□□□□ -0.58
PAPD4-214ENST00000513735 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
PAPD4-214ENST00000513735 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
PAPD4-214ENST00000513735 NBR1Q14596 966 aa11.39□□□□□ -0.59
PAPD4-214ENST00000513735 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
PAPD4-214ENST00000513735 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
PAPD4-214ENST00000513735 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
PAPD4-214ENST00000513735 FAM205CA6NFA0 338 aa11.37□□□□□ -0.59
PAPD4-214ENST00000513735 NUDT7P0C024 238 aa11.35□□□□□ -0.59
PAPD4-214ENST00000513735 OXER1Q8TDS5 423 aa11.35□□□□□ -0.59
PAPD4-214ENST00000513735 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
PAPD4-214ENST00000513735 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
PAPD4-214ENST00000513735 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
PAPD4-214ENST00000513735 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
PAPD4-214ENST00000513735 ERBB3P21860 1342 aa11.32□□□□□ -0.6
PAPD4-214ENST00000513735 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
PAPD4-214ENST00000513735 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
PAPD4-214ENST00000513735 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
PAPD4-214ENST00000513735 TBC1D12O60347 775 aa11.29□□□□□ -0.6
PAPD4-214ENST00000513735 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
PAPD4-214ENST00000513735 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
PAPD4-214ENST00000513735 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
PAPD4-214ENST00000513735 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
PAPD4-214ENST00000513735 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
PAPD4-214ENST00000513735 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
PAPD4-214ENST00000513735 EVI5O60447 810 aa11.21□□□□□ -0.61
PAPD4-214ENST00000513735 DPYSL4O14531 572 aa11.2□□□□□ -0.62
PAPD4-214ENST00000513735 E2F4Q16254 413 aa11.2□□□□□ -0.62
PAPD4-214ENST00000513735 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
PAPD4-214ENST00000513735 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
PAPD4-214ENST00000513735 KRTAP3-3Q9BYR6 98 aa11.2□□□□□ -0.62
PAPD4-214ENST00000513735 KRTAP3-2Q9BYR7 98 aa11.2□□□□□ -0.62
PAPD4-214ENST00000513735 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
PAPD4-214ENST00000513735 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
PAPD4-214ENST00000513735 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
PAPD4-214ENST00000513735 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
PAPD4-214ENST00000513735 FOSBP53539 338 aa11.11□□□□□ -0.63
PAPD4-214ENST00000513735 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
PAPD4-214ENST00000513735 ZNF454Q8N9F8 522 aa11.11□□□□□ -0.63
PAPD4-214ENST00000513735 PDIA6Q15084 440 aa11.09□□□□□ -0.63
PAPD4-214ENST00000513735 JPH4Q96JJ6 628 aa11.09□□□□□ -0.63
PAPD4-214ENST00000513735 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
PAPD4-214ENST00000513735 PBX2P40425 430 aa11.06□□□□□ -0.64
PAPD4-214ENST00000513735 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
PAPD4-214ENST00000513735 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
PAPD4-214ENST00000513735 PTGER2P43116 358 aa11.05□□□□□ -0.64
PAPD4-214ENST00000513735 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
PAPD4-214ENST00000513735 PSEN2P49810 448 aa11.04□□□□□ -0.64
PAPD4-214ENST00000513735 PHF14O94880 888 aa11.03□□□□□ -0.64
PAPD4-214ENST00000513735 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
PAPD4-214ENST00000513735 DDX12PQ92771 950 aa11.03□□□□□ -0.64
PAPD4-214ENST00000513735 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
PAPD4-214ENST00000513735 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
PAPD4-214ENST00000513735 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
PAPD4-214ENST00000513735 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
PAPD4-214ENST00000513735 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
PAPD4-214ENST00000513735 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
PAPD4-214ENST00000513735 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
PAPD4-214ENST00000513735 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
PAPD4-214ENST00000513735 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
PAPD4-214ENST00000513735 TYW1BQ6NUM6 668 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms