RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 BCORL1Q5H9F3 1711 aa14.8□□□□□ -0.04
PABPC4-218ENST00000513632 TTC37Q6PGP7 1564 aa14.8□□□□□ -0.04
PABPC4-218ENST00000513632 TROQ12816 1431 aaPredicted RBP14.79□□□□□ -0.04
PABPC4-218ENST00000513632 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
PABPC4-218ENST00000513632 HECW1Q76N89 1606 aa14.79□□□□□ -0.04
PABPC4-218ENST00000513632 MADDQ8WXG6 1647 aa14.77□□□□□ -0.04
PABPC4-218ENST00000513632 ATP10AO60312 1499 aa14.77□□□□□ -0.04
PABPC4-218ENST00000513632 AFAP1Q8N556 730 aa14.77□□□□□ -0.05
PABPC4-218ENST00000513632 PCF11O94913 1555 aaKnown RBP14.77□□□□□ -0.05
PABPC4-218ENST00000513632 RICTORQ6R327 1708 aa14.76□□□□□ -0.05
PABPC4-218ENST00000513632 HSPA2P54652 639 aa14.76□□□□□ -0.05
PABPC4-218ENST00000513632 ZNF518AQ6AHZ1 1483 aa14.75□□□□□ -0.05
PABPC4-218ENST00000513632 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
PABPC4-218ENST00000513632 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
PABPC4-218ENST00000513632 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
PABPC4-218ENST00000513632 ARHGAP5Q13017 1502 aa14.73□□□□□ -0.05
PABPC4-218ENST00000513632 KIF14Q15058 1648 aa14.72□□□□□ -0.05
PABPC4-218ENST00000513632 RIMS1Q86UR5 1692 aaKnown RBP14.71□□□□□ -0.06
PABPC4-218ENST00000513632 CASKIN1Q8WXD9 1431 aa14.7□□□□□ -0.06
PABPC4-218ENST00000513632 CEBPAP49715 358 aaPredicted RBP14.7□□□□□ -0.06
PABPC4-218ENST00000513632 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
PABPC4-218ENST00000513632 ZNF777Q9ULD5 760 aaPredicted RBP14.68□□□□□ -0.06
PABPC4-218ENST00000513632 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
PABPC4-218ENST00000513632 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
PABPC4-218ENST00000513632 ARHGEF12Q9NZN5 1544 aa14.65□□□□□ -0.06
PABPC4-218ENST00000513632 MLH3Q9UHC1 1453 aa14.64□□□□□ -0.07
PABPC4-218ENST00000513632 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
PABPC4-218ENST00000513632 TRAPPC8Q9Y2L5 1435 aa14.63□□□□□ -0.07
PABPC4-218ENST00000513632 KDM5CP41229 1560 aa14.62□□□□□ -0.07
PABPC4-218ENST00000513632 UHRF1BP1Q6BDS2 1440 aa14.62□□□□□ -0.07
PABPC4-218ENST00000513632 CFDP1Q9UEE9 299 aaPredicted RBP14.62□□□□□ -0.07
PABPC4-218ENST00000513632 FYCO1Q9BQS8 1478 aa14.62□□□□□ -0.07
PABPC4-218ENST00000513632 SPAG9O60271 1321 aaKnown RBP14.61□□□□□ -0.07
PABPC4-218ENST00000513632 HNRNPMP52272 730 aaKnown RBP eCLIP14.6□□□□□ -0.07
PABPC4-218ENST00000513632 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
PABPC4-218ENST00000513632 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
PABPC4-218ENST00000513632 CCNB3Q8WWL7 1395 aa14.59□□□□□ -0.07
PABPC4-218ENST00000513632 MTUS2Q5JR59 1369 aa14.58□□□□□ -0.08
PABPC4-218ENST00000513632 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.08
PABPC4-218ENST00000513632 ABCC1P33527 1531 aa14.57□□□□□ -0.08
PABPC4-218ENST00000513632 AGLP35573 1532 aa14.57□□□□□ -0.08
PABPC4-218ENST00000513632 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
PABPC4-218ENST00000513632 DIP2CQ9Y2E4 1556 aa14.57□□□□□ -0.08
PABPC4-218ENST00000513632 PLEKHH2Q8IVE3 1493 aa14.55□□□□□ -0.08
PABPC4-218ENST00000513632 GPATCH8Q9UKJ3 1502 aaKnown RBP14.55□□□□□ -0.08
PABPC4-218ENST00000513632 PREX2Q70Z35 1606 aa14.55□□□□□ -0.08
PABPC4-218ENST00000513632 KIAA1107Q9UPP5 1409 aa14.54□□□□□ -0.08
PABPC4-218ENST00000513632 CDC42BPBQ9Y5S2 1711 aa14.53□□□□□ -0.08
PABPC4-218ENST00000513632 GGT6Q6P531 493 aa14.52□□□□□ -0.09
PABPC4-218ENST00000513632 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
PABPC4-218ENST00000513632 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
PABPC4-218ENST00000513632 LRRIQ1Q96JM4 1722 aa14.51□□□□□ -0.09
PABPC4-218ENST00000513632 PREX1Q8TCU6 1659 aa14.51□□□□□ -0.09
PABPC4-218ENST00000513632 ABCA6Q8N139 1617 aa14.51□□□□□ -0.09
PABPC4-218ENST00000513632 PTPRTO14522 1441 aa14.49□□□□□ -0.09
PABPC4-218ENST00000513632 SAMD9LQ8IVG5 1584 aa14.49□□□□□ -0.09
PABPC4-218ENST00000513632 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
PABPC4-218ENST00000513632 SYCP2Q9BX26 1530 aa14.49□□□□□ -0.09
PABPC4-218ENST00000513632 ITSN2Q9NZM3 1697 aa14.48□□□□□ -0.09
PABPC4-218ENST00000513632 NPATQ14207 1427 aa14.48□□□□□ -0.09
PABPC4-218ENST00000513632 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
PABPC4-218ENST00000513632 A2MP01023 1474 aa14.47□□□□□ -0.09
PABPC4-218ENST00000513632 RSPH4AQ5TD94 716 aa14.47□□□□□ -0.09
PABPC4-218ENST00000513632 ZNF644Q9H582 1327 aaPredicted RBP14.46□□□□□ -0.09
PABPC4-218ENST00000513632 KIDINS220Q9ULH0 1771 aa14.46□□□□□ -0.09
PABPC4-218ENST00000513632 CDC42BPAQ5VT25 1732 aa14.45□□□□□ -0.1
PABPC4-218ENST00000513632 ATP7AQ04656 1500 aa14.45□□□□□ -0.1
PABPC4-218ENST00000513632 CEP162Q5TB80 1403 aa14.43□□□□□ -0.1
PABPC4-218ENST00000513632 PKD2Q13563 968 aa14.43□□□□□ -0.1
PABPC4-218ENST00000513632 RTEL1-TNFRSF6BF6WH68 1400 aa14.42□□□□□ -0.1
PABPC4-218ENST00000513632 NCOA1Q15788 1441 aa14.42□□□□□ -0.1
PABPC4-218ENST00000513632 TSPY4P0CV99 314 aa14.42□□□□□ -0.1
PABPC4-218ENST00000513632 TSPY10P0CW01 314 aa14.42□□□□□ -0.1
PABPC4-218ENST00000513632 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
PABPC4-218ENST00000513632 C3P01024 1663 aa14.42□□□□□ -0.1
PABPC4-218ENST00000513632 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
PABPC4-218ENST00000513632 KIF3BO15066 747 aa14.41□□□□□ -0.1
PABPC4-218ENST00000513632 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
PABPC4-218ENST00000513632 MBD5Q9P267 1494 aa14.39□□□□□ -0.11
PABPC4-218ENST00000513632 STRCQ7RTU9 1775 aa14.38□□□□□ -0.11
PABPC4-218ENST00000513632 PTPRKQ15262 1439 aa14.38□□□□□ -0.11
PABPC4-218ENST00000513632 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
PABPC4-218ENST00000513632 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
PABPC4-218ENST00000513632 SUPT6HQ7KZ85 1726 aaKnown RBP14.36□□□□□ -0.11
PABPC4-218ENST00000513632 PLXNC1O60486 1568 aa14.36□□□□□ -0.11
PABPC4-218ENST00000513632 INO80Q9ULG1 1556 aaPredicted RBP14.36□□□□□ -0.11
PABPC4-218ENST00000513632 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
PABPC4-218ENST00000513632 MROH2AA6NES4 1674 aa14.36□□□□□ -0.11
PABPC4-218ENST00000513632 DISP3Q9P2K9 1392 aa14.35□□□□□ -0.11
PABPC4-218ENST00000513632 TIAM1Q13009 1591 aa14.35□□□□□ -0.11
PABPC4-218ENST00000513632 NCOA2Q15596 1464 aa14.35□□□□□ -0.11
PABPC4-218ENST00000513632 PLA2R1Q13018 1463 aa14.34□□□□□ -0.11
PABPC4-218ENST00000513632 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
PABPC4-218ENST00000513632 CCDC141Q6ZP82 1450 aa14.34□□□□□ -0.11
PABPC4-218ENST00000513632 ZNF335Q9H4Z2 1342 aaPredicted RBP14.34□□□□□ -0.11
PABPC4-218ENST00000513632 UBAP1LF5GYI3 381 aa14.33□□□□□ -0.12
PABPC4-218ENST00000513632 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
PABPC4-218ENST00000513632 FBXO31Q5XUX0 539 aaPredicted RBP14.32□□□□□ -0.12
PABPC4-218ENST00000513632 THEMISQ8N1K5 641 aaPredicted RBP14.32□□□□□ -0.12
PABPC4-218ENST00000513632 TNRQ92752 1358 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms