RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
ABCC3-212ENST00000513511 MADDQ8WXG6 1647 aa22.42■■□□□ 1.18
ABCC3-212ENST00000513511 ZMYM4Q5VZL5 1548 aa22.41■■□□□ 1.18
ABCC3-212ENST00000513511 PTPRMP28827 1452 aa22.41■■□□□ 1.18
ABCC3-212ENST00000513511 ARHGAP5Q13017 1502 aa22.41■■□□□ 1.18
ABCC3-212ENST00000513511 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
ABCC3-212ENST00000513511 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
ABCC3-212ENST00000513511 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
ABCC3-212ENST00000513511 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
ABCC3-212ENST00000513511 CCDC18Q5T9S5 1454 aa22.39■■□□□ 1.17
ABCC3-212ENST00000513511 PLPPR3Q6T4P5 718 aa22.35■■□□□ 1.17
ABCC3-212ENST00000513511 RIMS1Q86UR5 1692 aaKnown RBP22.35■■□□□ 1.17
ABCC3-212ENST00000513511 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
ABCC3-212ENST00000513511 MLECQ14165 292 aa22.34■■□□□ 1.17
ABCC3-212ENST00000513511 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
ABCC3-212ENST00000513511 FYCO1Q9BQS8 1478 aa22.34■■□□□ 1.17
ABCC3-212ENST00000513511 MYT1LQ9UL68 1186 aa22.32■■□□□ 1.16
ABCC3-212ENST00000513511 CDC42BPBQ9Y5S2 1711 aa22.31■■□□□ 1.16
ABCC3-212ENST00000513511 ZNF518AQ6AHZ1 1483 aa22.29■■□□□ 1.16
ABCC3-212ENST00000513511 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
ABCC3-212ENST00000513511 AFAP1Q8N556 730 aa22.27■■□□□ 1.16
ABCC3-212ENST00000513511 ATP10AO60312 1499 aa22.26■■□□□ 1.15
ABCC3-212ENST00000513511 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
ABCC3-212ENST00000513511 FER1L4A9Z1Z3 1794 aa22.24■■□□□ 1.15
ABCC3-212ENST00000513511 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
ABCC3-212ENST00000513511 KDM5CP41229 1560 aa22.23■■□□□ 1.15
ABCC3-212ENST00000513511 ABCC1P33527 1531 aa22.21■■□□□ 1.15
ABCC3-212ENST00000513511 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
ABCC3-212ENST00000513511 ITSN2Q9NZM3 1697 aa22.2■■□□□ 1.15
ABCC3-212ENST00000513511 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
ABCC3-212ENST00000513511 TRAPPC8Q9Y2L5 1435 aa22.19■■□□□ 1.14
ABCC3-212ENST00000513511 ARHGEF12Q9NZN5 1544 aa22.19■■□□□ 1.14
ABCC3-212ENST00000513511 DIP2CQ9Y2E4 1556 aa22.18■■□□□ 1.14
ABCC3-212ENST00000513511 LMTK3Q96Q04 1460 aa22.18■■□□□ 1.14
ABCC3-212ENST00000513511 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
ABCC3-212ENST00000513511 VPS8Q8N3P4 1428 aa22.16■■□□□ 1.14
ABCC3-212ENST00000513511 MTUS2Q5JR59 1369 aa22.14■■□□□ 1.14
ABCC3-212ENST00000513511 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
ABCC3-212ENST00000513511 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
ABCC3-212ENST00000513511 MLH3Q9UHC1 1453 aa22.13■■□□□ 1.13
ABCC3-212ENST00000513511 SYCP2Q9BX26 1530 aa22.12■■□□□ 1.13
ABCC3-212ENST00000513511 HSPA2P54652 639 aa22.12■■□□□ 1.13
ABCC3-212ENST00000513511 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
ABCC3-212ENST00000513511 CEBPAP49715 358 aaPredicted RBP22.09■■□□□ 1.13
ABCC3-212ENST00000513511 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
ABCC3-212ENST00000513511 KIDINS220Q9ULH0 1771 aa22.09■■□□□ 1.13
ABCC3-212ENST00000513511 REREQ9P2R6 1566 aa22.08■■□□□ 1.13
ABCC3-212ENST00000513511 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.13
ABCC3-212ENST00000513511 EHBP1L1Q8N3D4 1523 aa22.06■■□□□ 1.12
ABCC3-212ENST00000513511 ESF1Q9H501 851 aaKnown RBP22.04■■□□□ 1.12
ABCC3-212ENST00000513511 SPAG9O60271 1321 aaKnown RBP22.04■■□□□ 1.12
ABCC3-212ENST00000513511 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
ABCC3-212ENST00000513511 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
ABCC3-212ENST00000513511 PLEKHH2Q8IVE3 1493 aa22.01■■□□□ 1.11
ABCC3-212ENST00000513511 AGLP35573 1532 aa22.01■■□□□ 1.11
ABCC3-212ENST00000513511 ATP7AQ04656 1500 aa22■■□□□ 1.11
ABCC3-212ENST00000513511 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
ABCC3-212ENST00000513511 SUPT6HQ7KZ85 1726 aaKnown RBP21.98■■□□□ 1.11
ABCC3-212ENST00000513511 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
ABCC3-212ENST00000513511 C3P01024 1663 aa21.97■■□□□ 1.11
ABCC3-212ENST00000513511 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
ABCC3-212ENST00000513511 UHRF1BP1Q6BDS2 1440 aa21.94■■□□□ 1.1
ABCC3-212ENST00000513511 MAP3K1Q13233 1512 aa21.93■■□□□ 1.1
ABCC3-212ENST00000513511 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
ABCC3-212ENST00000513511 A2MP01023 1474 aa21.9■■□□□ 1.1
ABCC3-212ENST00000513511 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
ABCC3-212ENST00000513511 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.1
ABCC3-212ENST00000513511 PLXNC1O60486 1568 aa21.88■■□□□ 1.09
ABCC3-212ENST00000513511 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
ABCC3-212ENST00000513511 MBD5Q9P267 1494 aa21.87■■□□□ 1.09
ABCC3-212ENST00000513511 ADGBQ8N7X0 1667 aa21.87■■□□□ 1.09
ABCC3-212ENST00000513511 CAMSAP2Q08AD1 1489 aa21.86■■□□□ 1.09
ABCC3-212ENST00000513511 GGT6Q6P531 493 aa21.86■■□□□ 1.09
ABCC3-212ENST00000513511 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
ABCC3-212ENST00000513511 SETD1BQ9UPS6 1966 aaKnown RBP21.85■■□□□ 1.09
ABCC3-212ENST00000513511 KANK4Q5T7N3 995 aaPredicted RBP21.84■■□□□ 1.09
ABCC3-212ENST00000513511 MROH2AA6NES4 1674 aa21.84■■□□□ 1.09
ABCC3-212ENST00000513511 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.08
ABCC3-212ENST00000513511 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
ABCC3-212ENST00000513511 APLP2Q06481 763 aa21.81■■□□□ 1.08
ABCC3-212ENST00000513511 STRCQ7RTU9 1775 aa21.81■■□□□ 1.08
ABCC3-212ENST00000513511 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
ABCC3-212ENST00000513511 NPATQ14207 1427 aa21.76■■□□□ 1.07
ABCC3-212ENST00000513511 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
ABCC3-212ENST00000513511 DHX29Q7Z478 1369 aaKnown RBP21.74■■□□□ 1.07
ABCC3-212ENST00000513511 CERKQ8TCT0 537 aa21.74■■□□□ 1.07
ABCC3-212ENST00000513511 KIF3BO15066 747 aa21.73■■□□□ 1.07
ABCC3-212ENST00000513511 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
ABCC3-212ENST00000513511 ARHGEF5Q12774 1597 aa21.73■■□□□ 1.07
ABCC3-212ENST00000513511 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
ABCC3-212ENST00000513511 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
ABCC3-212ENST00000513511 MYO3AQ8NEV4 1616 aa21.72■■□□□ 1.07
ABCC3-212ENST00000513511 CAMSAP1Q5T5Y3 1602 aa21.71■■□□□ 1.07
ABCC3-212ENST00000513511 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
ABCC3-212ENST00000513511 NCOA1Q15788 1441 aa21.69■■□□□ 1.06
ABCC3-212ENST00000513511 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
ABCC3-212ENST00000513511 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
ABCC3-212ENST00000513511 CEP170BQ9Y4F5 1589 aaPredicted RBP21.67■■□□□ 1.06
ABCC3-212ENST00000513511 PTPRTO14522 1441 aa21.66■■□□□ 1.06
ABCC3-212ENST00000513511 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms