RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
ABCC3-212ENST00000513511 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
ABCC3-212ENST00000513511 ABCC9O60706 1549 aa30.57■■■□□ 2.49
ABCC3-212ENST00000513511 RB1CC1Q8TDY2 1594 aa29.11■■■□□ 2.25
ABCC3-212ENST00000513511 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
ABCC3-212ENST00000513511 NACADO15069 1562 aa28.91■■■□□ 2.22
ABCC3-212ENST00000513511 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
ABCC3-212ENST00000513511 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
ABCC3-212ENST00000513511 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
ABCC3-212ENST00000513511 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
ABCC3-212ENST00000513511 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
ABCC3-212ENST00000513511 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
ABCC3-212ENST00000513511 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
ABCC3-212ENST00000513511 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
ABCC3-212ENST00000513511 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
ABCC3-212ENST00000513511 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
ABCC3-212ENST00000513511 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
ABCC3-212ENST00000513511 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
ABCC3-212ENST00000513511 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
ABCC3-212ENST00000513511 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
ABCC3-212ENST00000513511 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
ABCC3-212ENST00000513511 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
ABCC3-212ENST00000513511 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
ABCC3-212ENST00000513511 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
ABCC3-212ENST00000513511 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
ABCC3-212ENST00000513511 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
ABCC3-212ENST00000513511 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
ABCC3-212ENST00000513511 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
ABCC3-212ENST00000513511 NESP48681 1621 aa26.29■■□□□ 1.8
ABCC3-212ENST00000513511 CUX2O14529 1486 aa26.21■■□□□ 1.79
ABCC3-212ENST00000513511 WIZO95785 1651 aa26.12■■□□□ 1.77
ABCC3-212ENST00000513511 LAMC3Q9Y6N6 1575 aa26.08■■□□□ 1.77
ABCC3-212ENST00000513511 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
ABCC3-212ENST00000513511 KIF21AQ7Z4S6 1674 aa25.98■■□□□ 1.75
ABCC3-212ENST00000513511 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
ABCC3-212ENST00000513511 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
ABCC3-212ENST00000513511 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.74
ABCC3-212ENST00000513511 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
ABCC3-212ENST00000513511 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
ABCC3-212ENST00000513511 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
ABCC3-212ENST00000513511 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
ABCC3-212ENST00000513511 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
ABCC3-212ENST00000513511 WDR62O43379 1518 aa25.63■■□□□ 1.69
ABCC3-212ENST00000513511 CFTRP13569 1480 aa25.62■■□□□ 1.69
ABCC3-212ENST00000513511 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
ABCC3-212ENST00000513511 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
ABCC3-212ENST00000513511 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
ABCC3-212ENST00000513511 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
ABCC3-212ENST00000513511 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
ABCC3-212ENST00000513511 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
ABCC3-212ENST00000513511 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
ABCC3-212ENST00000513511 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
ABCC3-212ENST00000513511 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
ABCC3-212ENST00000513511 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
ABCC3-212ENST00000513511 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
ABCC3-212ENST00000513511 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
ABCC3-212ENST00000513511 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
ABCC3-212ENST00000513511 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
ABCC3-212ENST00000513511 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.57
ABCC3-212ENST00000513511 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
ABCC3-212ENST00000513511 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
ABCC3-212ENST00000513511 SOGA1O94964 1423 aa24.8■■□□□ 1.56
ABCC3-212ENST00000513511 CUX1P39880 1505 aa24.79■■□□□ 1.56
ABCC3-212ENST00000513511 CHD1O14646 1710 aa24.78■■□□□ 1.56
ABCC3-212ENST00000513511 FBLN2P98095 1184 aa24.77■■□□□ 1.56
ABCC3-212ENST00000513511 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
ABCC3-212ENST00000513511 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
ABCC3-212ENST00000513511 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
ABCC3-212ENST00000513511 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
ABCC3-212ENST00000513511 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
ABCC3-212ENST00000513511 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
ABCC3-212ENST00000513511 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
ABCC3-212ENST00000513511 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
ABCC3-212ENST00000513511 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
ABCC3-212ENST00000513511 MAGI1Q96QZ7 1491 aaPredicted RBP24.54■■□□□ 1.52
ABCC3-212ENST00000513511 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
ABCC3-212ENST00000513511 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
ABCC3-212ENST00000513511 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
ABCC3-212ENST00000513511 ABCA10Q8WWZ4 1543 aa24.48■■□□□ 1.51
ABCC3-212ENST00000513511 SYNJ2O15056 1496 aa24.47■■□□□ 1.51
ABCC3-212ENST00000513511 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
ABCC3-212ENST00000513511 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
ABCC3-212ENST00000513511 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
ABCC3-212ENST00000513511 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
ABCC3-212ENST00000513511 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
ABCC3-212ENST00000513511 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
ABCC3-212ENST00000513511 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
ABCC3-212ENST00000513511 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
ABCC3-212ENST00000513511 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
ABCC3-212ENST00000513511 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
ABCC3-212ENST00000513511 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
ABCC3-212ENST00000513511 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
ABCC3-212ENST00000513511 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
ABCC3-212ENST00000513511 NUP160Q12769 1436 aa24.14■■□□□ 1.45
ABCC3-212ENST00000513511 ERCC6L2Q5T890 1561 aa24.11■■□□□ 1.45
ABCC3-212ENST00000513511 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
ABCC3-212ENST00000513511 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
ABCC3-212ENST00000513511 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
ABCC3-212ENST00000513511 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
ABCC3-212ENST00000513511 JPH4Q96JJ6 628 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms