RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-218ENST00000511978 MFSD10Q14728 455 aa12.59□□□□□ -0.39
MATR3-218ENST00000511978 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
MATR3-218ENST00000511978 GPHNQ9NQX3 736 aaPredicted RBP12.59□□□□□ -0.39
MATR3-218ENST00000511978 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
MATR3-218ENST00000511978 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
MATR3-218ENST00000511978 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
MATR3-218ENST00000511978 KIF3CO14782 793 aa12.55□□□□□ -0.4
MATR3-218ENST00000511978 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
MATR3-218ENST00000511978 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
MATR3-218ENST00000511978 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
MATR3-218ENST00000511978 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
MATR3-218ENST00000511978 DSG2Q14126 1118 aa12.5□□□□□ -0.41
MATR3-218ENST00000511978 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
MATR3-218ENST00000511978 FOXK1P85037 733 aa12.49□□□□□ -0.41
MATR3-218ENST00000511978 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
MATR3-218ENST00000511978 E2F4Q16254 413 aa12.47□□□□□ -0.41
MATR3-218ENST00000511978 KCNV2Q8TDN2 545 aa12.47□□□□□ -0.41
MATR3-218ENST00000511978 P3H3Q8IVL6 736 aa12.46□□□□□ -0.41
MATR3-218ENST00000511978 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
MATR3-218ENST00000511978 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
MATR3-218ENST00000511978 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
MATR3-218ENST00000511978 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
MATR3-218ENST00000511978 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
MATR3-218ENST00000511978 BCANQ96GW7 911 aa12.38□□□□□ -0.43
MATR3-218ENST00000511978 LHX8Q68G74 356 aa12.37□□□□□ -0.43
MATR3-218ENST00000511978 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
MATR3-218ENST00000511978 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
MATR3-218ENST00000511978 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
MATR3-218ENST00000511978 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
MATR3-218ENST00000511978 NBR1Q14596 966 aa12.32□□□□□ -0.44
MATR3-218ENST00000511978 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
MATR3-218ENST00000511978 SLC34A2O95436 690 aa12.29□□□□□ -0.44
MATR3-218ENST00000511978 DPYSL4O14531 572 aa12.28□□□□□ -0.44
MATR3-218ENST00000511978 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.45
MATR3-218ENST00000511978 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
MATR3-218ENST00000511978 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
MATR3-218ENST00000511978 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
MATR3-218ENST00000511978 PDIA6Q15084 440 aa12.22□□□□□ -0.45
MATR3-218ENST00000511978 SPDYE16A6NNV3 312 aaPredicted RBP12.21□□□□□ -0.45
MATR3-218ENST00000511978 SEMA3EO15041 775 aa12.21□□□□□ -0.45
MATR3-218ENST00000511978 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
MATR3-218ENST00000511978 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
MATR3-218ENST00000511978 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
MATR3-218ENST00000511978 TBC1D12O60347 775 aa12.18□□□□□ -0.46
MATR3-218ENST00000511978 SNPHO15079 494 aa12.16□□□□□ -0.46
MATR3-218ENST00000511978 EVI5O60447 810 aa12.15□□□□□ -0.46
MATR3-218ENST00000511978 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
MATR3-218ENST00000511978 NISCHQ9Y2I1 1504 aa12.15□□□□□ -0.46
MATR3-218ENST00000511978 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
MATR3-218ENST00000511978 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
MATR3-218ENST00000511978 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
MATR3-218ENST00000511978 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
MATR3-218ENST00000511978 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
MATR3-218ENST00000511978 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
MATR3-218ENST00000511978 ZNF710Q8N1W2 664 aa12.11□□□□□ -0.47
MATR3-218ENST00000511978 PTGER2P43116 358 aa12.1□□□□□ -0.47
MATR3-218ENST00000511978 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.475e-7■■■□□ 17.8
MATR3-218ENST00000511978 ZNF316A6NFI3 1004 aaPredicted RBP12.08□□□□□ -0.48
MATR3-218ENST00000511978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
MATR3-218ENST00000511978 NUDT7P0C024 238 aa12.06□□□□□ -0.48
MATR3-218ENST00000511978 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
MATR3-218ENST00000511978 SMYD5Q6GMV2 418 aa12.05□□□□□ -0.48
MATR3-218ENST00000511978 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
MATR3-218ENST00000511978 DDX12PQ92771 950 aa12.04□□□□□ -0.48
MATR3-218ENST00000511978 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
MATR3-218ENST00000511978 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
MATR3-218ENST00000511978 OSBPP22059 807 aa12□□□□□ -0.49
MATR3-218ENST00000511978 ST18O60284 1047 aa11.98□□□□□ -0.49
MATR3-218ENST00000511978 PHF14O94880 888 aa11.98□□□□□ -0.49
MATR3-218ENST00000511978 JPH4Q96JJ6 628 aa11.98□□□□□ -0.49
MATR3-218ENST00000511978 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
MATR3-218ENST00000511978 FOSBP53539 338 aa11.97□□□□□ -0.49
MATR3-218ENST00000511978 RBM26Q5T8P6 1007 aaKnown RBP11.97□□□□□ -0.49
MATR3-218ENST00000511978 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
MATR3-218ENST00000511978 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
MATR3-218ENST00000511978 EPAS1Q99814 870 aa11.95□□□□□ -0.5
MATR3-218ENST00000511978 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
MATR3-218ENST00000511978 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
MATR3-218ENST00000511978 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
MATR3-218ENST00000511978 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
MATR3-218ENST00000511978 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
MATR3-218ENST00000511978 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
MATR3-218ENST00000511978 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
MATR3-218ENST00000511978 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
MATR3-218ENST00000511978 PRKCSHP14314 528 aaPredicted RBP11.89□□□□□ -0.51
MATR3-218ENST00000511978 ZDHHC16Q969W1 377 aa11.89□□□□□ -0.51
MATR3-218ENST00000511978 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
MATR3-218ENST00000511978 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
MATR3-218ENST00000511978 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
MATR3-218ENST00000511978 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
MATR3-218ENST00000511978 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
MATR3-218ENST00000511978 GPR37O15354 613 aa11.86□□□□□ -0.51
MATR3-218ENST00000511978 EMP3P54852 163 aa11.86□□□□□ -0.51
MATR3-218ENST00000511978 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
MATR3-218ENST00000511978 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
MATR3-218ENST00000511978 MAP3K7O43318 606 aa11.85□□□□□ -0.51
MATR3-218ENST00000511978 ERBB3P21860 1342 aa11.85□□□□□ -0.51
MATR3-218ENST00000511978 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
MATR3-218ENST00000511978 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
MATR3-218ENST00000511978 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms