RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FOXD4L5Q5VV16 416 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-208ENST00000511955 FOXD4L4Q8WXT5 416 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-208ENST00000511955 FHAD1B1AJZ9 1412 aa7.29□□□□□ -1.24
TRAPPC11-208ENST00000511955 ERICH3Q5RHP9 1530 aa7.29□□□□□ -1.24
TRAPPC11-208ENST00000511955 IFNLR1Q8IU57 520 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-208ENST00000511955 CARMIL1Q5VZK9 1371 aa7.29□□□□□ -1.24
TRAPPC11-208ENST00000511955 ADAMTS12P58397 1594 aa7.28□□□□□ -1.24
TRAPPC11-208ENST00000511955 RGS22Q8NE09 1264 aa7.28□□□□□ -1.24
TRAPPC11-208ENST00000511955 GRIN2AQ12879 1464 aa7.28□□□□□ -1.24
TRAPPC11-208ENST00000511955 CCDC136Q96JN2 1154 aa7.28□□□□□ -1.24
TRAPPC11-208ENST00000511955 USP35Q9P2H5 1018 aa7.28□□□□□ -1.24
TRAPPC11-208ENST00000511955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC11-208ENST00000511955 HNRNPUL2Q1KMD3 747 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-208ENST00000511955 VASPP50552 380 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC11-208ENST00000511955 ZNF592Q92610 1267 aa7.25□□□□□ -1.25
TRAPPC11-208ENST00000511955 CEP170Q5SW79 1584 aa7.24□□□□□ -1.25
TRAPPC11-208ENST00000511955 APBB1O00213 710 aa7.24□□□□□ -1.25
TRAPPC11-208ENST00000511955 BRPF3Q9ULD4 1205 aa7.24□□□□□ -1.25
TRAPPC11-208ENST00000511955 ZNF692Q9BU19 519 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-208ENST00000511955 U3KPZ7 1027 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-208ENST00000511955 CUL7Q14999 1698 aa7.24□□□□□ -1.25
TRAPPC11-208ENST00000511955 A0A0U1RQG5 324 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC11-208ENST00000511955 ZFP91Q96JP5 570 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC11-208ENST00000511955 RAPGEF2Q9Y4G8 1499 aa7.23□□□□□ -1.25
TRAPPC11-208ENST00000511955 ZNF326Q5BKZ1 582 aaKnown RBP7.23□□□□□ -1.25
TRAPPC11-208ENST00000511955 RSPH4AQ5TD94 716 aa7.23□□□□□ -1.25
TRAPPC11-208ENST00000511955 CYB5RLQ6IPT4 315 aa7.23□□□□□ -1.25
TRAPPC11-208ENST00000511955 CWC22Q9HCG8 908 aaKnown RBP7.22□□□□□ -1.25
TRAPPC11-208ENST00000511955 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC11-208ENST00000511955 FAM177A1Q8N128 213 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC11-208ENST00000511955 TICAM2Q86XR7 235 aa7.21□□□□□ -1.26
TRAPPC11-208ENST00000511955 JPH4Q96JJ6 628 aa7.21□□□□□ -1.26
TRAPPC11-208ENST00000511955 NUP160Q12769 1436 aa7.21□□□□□ -1.26
TRAPPC11-208ENST00000511955 AEBP1Q8IUX7 1158 aa7.21□□□□□ -1.26
TRAPPC11-208ENST00000511955 P3H3Q8IVL6 736 aa7.21□□□□□ -1.26
TRAPPC11-208ENST00000511955 EEA1Q15075 1411 aa7.2□□□□□ -1.26
TRAPPC11-208ENST00000511955 ARHGEF11O15085 1522 aa7.2□□□□□ -1.26
TRAPPC11-208ENST00000511955 PRXQ9BXM0 1461 aa7.2□□□□□ -1.26
TRAPPC11-208ENST00000511955 ECM2O94769 699 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC11-208ENST00000511955 CLASP1Q7Z460 1538 aa7.2□□□□□ -1.26
TRAPPC11-208ENST00000511955 ERCC6L2Q5T890 1561 aa7.2□□□□□ -1.26
TRAPPC11-208ENST00000511955 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 PSMD1Q99460 953 aa7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 PPM1GO15355 546 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 PRG4Q92954 1404 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 RIMBP3CA6NJZ7 1639 aa7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 RIMBP3BA6NNM3 1639 aa7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 RIMBP3Q9UFD9 1639 aa7.19□□□□□ -1.26
TRAPPC11-208ENST00000511955 TMCO4Q5TGY1 634 aa7.18□□□□□ -1.26
TRAPPC11-208ENST00000511955 KIAA0586Q9BVV6 1533 aa7.18□□□□□ -1.26
TRAPPC11-208ENST00000511955 LMOD2Q6P5Q4 547 aa7.17□□□□□ -1.26
TRAPPC11-208ENST00000511955 CERS3Q8IU89 383 aa7.17□□□□□ -1.26
TRAPPC11-208ENST00000511955 ARID4BQ4LE39 1312 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC11-208ENST00000511955 ATF5Q9Y2D1 282 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC11-208ENST00000511955 CLSTN1O94985 981 aa7.16□□□□□ -1.26
TRAPPC11-208ENST00000511955 MFAP1P55081 439 aaKnown RBP7.16□□□□□ -1.26
TRAPPC11-208ENST00000511955 IQGAP2Q13576 1575 aa7.16□□□□□ -1.26
TRAPPC11-208ENST00000511955 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC11-208ENST00000511955 NAP1L5Q96NT1 182 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC11-208ENST00000511955 RGL2O15211 777 aa7.15□□□□□ -1.26
TRAPPC11-208ENST00000511955 ARAP1Q96P48 1450 aa7.15□□□□□ -1.27
TRAPPC11-208ENST00000511955 GOLGA3Q08378 1498 aa7.14□□□□□ -1.27
TRAPPC11-208ENST00000511955 ZNF526Q8TF50 670 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC11-208ENST00000511955 E9PSI1 815 aa7.13□□□□□ -1.27
TRAPPC11-208ENST00000511955 KIF21BO75037 1637 aa7.13□□□□□ -1.27
TRAPPC11-208ENST00000511955 CTTNBP2Q8WZ74 1663 aa7.13□□□□□ -1.27
TRAPPC11-208ENST00000511955 CCDC82Q8N4S0 544 aa7.13□□□□□ -1.27
TRAPPC11-208ENST00000511955 CHGAP10645 457 aaKnown RBP7.12□□□□□ -1.27
TRAPPC11-208ENST00000511955 SHROOM2Q13796 1616 aa7.12□□□□□ -1.27
TRAPPC11-208ENST00000511955 CARMIL2Q6F5E8 1435 aa7.12□□□□□ -1.27
TRAPPC11-208ENST00000511955 ATP1B4Q9UN42 357 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC11-208ENST00000511955 DISP1Q96F81 1524 aa7.11□□□□□ -1.27
TRAPPC11-208ENST00000511955 SLC24A3Q9HC58 644 aa7.11□□□□□ -1.27
TRAPPC11-208ENST00000511955 PTPRGP23470 1445 aa7.1□□□□□ -1.27
TRAPPC11-208ENST00000511955 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC11-208ENST00000511955 FHOD3Q2V2M9 1422 aa7.09□□□□□ -1.27
TRAPPC11-208ENST00000511955 TNIKQ9UKE5 1360 aa7.09□□□□□ -1.27
TRAPPC11-208ENST00000511955 UGGT2Q9NYU1 1516 aa7.08□□□□□ -1.28
TRAPPC11-208ENST00000511955 KIAA0556O60303 1618 aa7.08□□□□□ -1.28
TRAPPC11-208ENST00000511955 ANO8Q9HCE9 1232 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-208ENST00000511955 CENPBP07199 599 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC11-208ENST00000511955 CC2D2BQ6DHV5 1058 aa7.07□□□□□ -1.28
TRAPPC11-208ENST00000511955 PRDM16Q9HAZ2 1276 aa7.07□□□□□ -1.28
TRAPPC11-208ENST00000511955 PLSCR2Q9NRY7 297 aa7.07□□□□□ -1.28
TRAPPC11-208ENST00000511955 PLB1Q6P1J6 1458 aa7.07□□□□□ -1.28
TRAPPC11-208ENST00000511955 ZNF219Q9P2Y4 722 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC11-208ENST00000511955 CLIP1P30622 1438 aa7.06□□□□□ -1.28
TRAPPC11-208ENST00000511955 AAMPQ13685 434 aa7.05□□□□□ -1.28
TRAPPC11-208ENST00000511955 TRAIPQ9BWF2 469 aa7.05□□□□□ -1.28
TRAPPC11-208ENST00000511955 PRDM10Q9NQV6 1147 aa7.05□□□□□ -1.28
TRAPPC11-208ENST00000511955 ARHGAP35Q9NRY4 1499 aa7.04□□□□□ -1.28
TRAPPC11-208ENST00000511955 NCLP19338 710 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-208ENST00000511955 CCDC27Q2M243 656 aa7.04□□□□□ -1.28
TRAPPC11-208ENST00000511955 CEP162Q5TB80 1403 aa7.04□□□□□ -1.28
TRAPPC11-208ENST00000511955 UACAQ9BZF9 1416 aa7.04□□□□□ -1.28
TRAPPC11-208ENST00000511955 KDM4AO75164 1064 aa7.04□□□□□ -1.28
TRAPPC11-208ENST00000511955 ADCY10Q96PN6 1610 aa7.03□□□□□ -1.28
TRAPPC11-208ENST00000511955 SAMD9Q5K651 1589 aa7.03□□□□□ -1.28
TRAPPC11-208ENST00000511955 MKRN3Q13064 507 aaKnown RBP7.02□□□□□ -1.28
TRAPPC11-208ENST00000511955 KCNH8Q96L42 1107 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms