RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 MIA2Q96PC5 1412 aa6.47□□□□□ -1.37
PTPN13-209ENST00000511467 CFDP1Q9UEE9 299 aaPredicted RBP6.47□□□□□ -1.37
PTPN13-209ENST00000511467 BECN1Q14457 450 aa6.46□□□□□ -1.37
PTPN13-209ENST00000511467 NUDCQ9Y266 331 aa6.46□□□□□ -1.38
PTPN13-209ENST00000511467 RRBP1Q9P2E9 1410 aaKnown RBP6.46□□□□□ -1.38
PTPN13-209ENST00000511467 WDR43Q15061 677 aaKnown RBP eCLIP6.46□□□□□ -1.38
PTPN13-209ENST00000511467 USP35Q9P2H5 1018 aa6.45□□□□□ -1.38
PTPN13-209ENST00000511467 SLC4A1APQ9BWU0 796 aaKnown RBP6.45□□□□□ -1.38
PTPN13-209ENST00000511467 ABCA10Q8WWZ4 1543 aa6.45□□□□□ -1.38
PTPN13-209ENST00000511467 CASKIN1Q8WXD9 1431 aa6.45□□□□□ -1.38
PTPN13-209ENST00000511467 L1TD1Q5T7N2 865 aaKnown RBP6.45□□□□□ -1.38
PTPN13-209ENST00000511467 EFCAB2Q5VUJ9 269 aa6.44□□□□□ -1.38
PTPN13-209ENST00000511467 CCDC141Q6ZP82 1450 aa6.44□□□□□ -1.38
PTPN13-209ENST00000511467 FGD5Q6ZNL6 1462 aa6.43□□□□□ -1.38
PTPN13-209ENST00000511467 AKNAQ7Z591 1439 aa6.43□□□□□ -1.38
PTPN13-209ENST00000511467 TMC1Q8TDI8 760 aa6.43□□□□□ -1.38
PTPN13-209ENST00000511467 EHMT2Q96KQ7 1210 aa6.42□□□□□ -1.38
PTPN13-209ENST00000511467 NCOA2Q15596 1464 aa6.42□□□□□ -1.38
PTPN13-209ENST00000511467 GOLGA6L22H0YM25 854 aa6.42□□□□□ -1.38
PTPN13-209ENST00000511467 ITGAEP38570 1179 aa6.42□□□□□ -1.38
PTPN13-209ENST00000511467 WASHC2AQ641Q2 1341 aa6.42□□□□□ -1.38
PTPN13-209ENST00000511467 TIAM1Q13009 1591 aa6.42□□□□□ -1.38
PTPN13-209ENST00000511467 CCER2I3L3R5 266 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 GLIPR1L2Q4G1C9 344 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 HFM1A2PYH4 1435 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 POGZQ7Z3K3 1410 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 PRKCSHP14314 528 aaPredicted RBP6.41□□□□□ -1.38
PTPN13-209ENST00000511467 BCANQ96GW7 911 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 NRDCO43847 1150 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 KNSTRNQ9Y448 316 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 ANKRD30BQ9BXX2 1392 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 TOPBP1Q92547 1522 aa6.41□□□□□ -1.38
PTPN13-209ENST00000511467 LMOD3Q0VAK6 560 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 CCDC34Q96HJ3 373 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 CCDC7Q96M83 1385 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 AK9Q5TCS8 1911 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 WASHC2CQ9Y4E1 1318 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 RALBP1Q15311 655 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 FOXD1Q16676 465 aa6.4□□□□□ -1.38
PTPN13-209ENST00000511467 PPP6R1Q9UPN7 881 aa6.39□□□□□ -1.39
PTPN13-209ENST00000511467 RAPGEF6Q8TEU7 1601 aa6.39□□□□□ -1.39
PTPN13-209ENST00000511467 TMF1P82094 1093 aa6.39□□□□□ -1.39
PTPN13-209ENST00000511467 FHOD3Q2V2M9 1422 aa6.38□□□□□ -1.39
PTPN13-209ENST00000511467 SHROOM2Q13796 1616 aa6.38□□□□□ -1.39
PTPN13-209ENST00000511467 PPP1R15AO75807 674 aaPredicted RBP6.38□□□□□ -1.39
PTPN13-209ENST00000511467 LRRFIP1Q32MZ4 808 aaKnown RBP6.38□□□□□ -1.39
PTPN13-209ENST00000511467 A0A0U1RQG5 324 aaPredicted RBP6.38□□□□□ -1.39
PTPN13-209ENST00000511467 PDE3BQ13370 1112 aa6.38□□□□□ -1.39
PTPN13-209ENST00000511467 HSP90AA1P07900 732 aaKnown RBP6.37□□□□□ -1.39
PTPN13-209ENST00000511467 KIAA0586Q9BVV6 1533 aa6.37□□□□□ -1.39
PTPN13-209ENST00000511467 TEX14Q8IWB6 1497 aa6.37□□□□□ -1.39
PTPN13-209ENST00000511467 HSP90B1P14625 803 aaKnown RBP6.37□□□□□ -1.39
PTPN13-209ENST00000511467 GOLGA6L6A8MZA4 724 aa6.37□□□□□ -1.39
PTPN13-209ENST00000511467 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPN13-209ENST00000511467 IPO8O15397 1037 aaKnown RBP6.37□□□□□ -1.39
PTPN13-209ENST00000511467 CNTLNQ9NXG0 1405 aa6.37□□□□□ -1.39
PTPN13-209ENST00000511467 PDIA4P13667 645 aaKnown RBP6.36□□□□□ -1.39
PTPN13-209ENST00000511467 CDK11BP21127 795 aaKnown RBP6.36□□□□□ -1.39
PTPN13-209ENST00000511467 ROCK1Q13464 1354 aa6.36□□□□□ -1.39
PTPN13-209ENST00000511467 PTPN23Q9H3S7 1636 aa6.36□□□□□ -1.39
PTPN13-209ENST00000511467 CCDC144AA2RUR9 1427 aa6.36□□□□□ -1.39
PTPN13-209ENST00000511467 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
PTPN13-209ENST00000511467 POLR3GLQ9BT43 218 aa6.35□□□□□ -1.39
PTPN13-209ENST00000511467 ABCA5Q8WWZ7 1642 aa6.35□□□□□ -1.39
PTPN13-209ENST00000511467 EPRSP07814 1512 aaKnown RBP6.35□□□□□ -1.39
PTPN13-209ENST00000511467 NINLQ9Y2I6 1382 aa6.34□□□□□ -1.39
PTPN13-209ENST00000511467 EID1Q9Y6B2 187 aa6.34□□□□□ -1.39
PTPN13-209ENST00000511467 HTATSF1O43719 755 aaKnown RBP6.34□□□□□ -1.39
PTPN13-209ENST00000511467 TERF2IPQ9NYB0 399 aa6.34□□□□□ -1.39
PTPN13-209ENST00000511467 FAM135AQ9P2D6 1515 aa6.34□□□□□ -1.39
PTPN13-209ENST00000511467 LOC105371045A0A1W2PR82 267 aa6.34□□□□□ -1.39
PTPN13-209ENST00000511467 LRRC9Q6ZRR7 1453 aa6.33□□□□□ -1.4
PTPN13-209ENST00000511467 ZNF777Q9ULD5 760 aaPredicted RBP6.33□□□□□ -1.4
PTPN13-209ENST00000511467 PTPRGP23470 1445 aa6.33□□□□□ -1.4
PTPN13-209ENST00000511467 DHX37Q8IY37 1157 aaKnown RBP6.33□□□□□ -1.4
PTPN13-209ENST00000511467 WDR62O43379 1518 aa6.33□□□□□ -1.4
PTPN13-209ENST00000511467 MCCP23508 829 aa6.33□□□□□ -1.4
PTPN13-209ENST00000511467 KIF3AQ9Y496 699 aa6.33□□□□□ -1.4
PTPN13-209ENST00000511467 MAPK8IP3Q9UPT6 1336 aa6.33□□□□□ -1.4
PTPN13-209ENST00000511467 ARHGAP5Q13017 1502 aa6.32□□□□□ -1.4
PTPN13-209ENST00000511467 WDR7Q9Y4E6 1490 aa6.32□□□□□ -1.4
PTPN13-209ENST00000511467 PRXQ9BXM0 1461 aa6.32□□□□□ -1.4
PTPN13-209ENST00000511467 ZNF326Q5BKZ1 582 aaKnown RBP6.31□□□□□ -1.4
PTPN13-209ENST00000511467 UGGT2Q9NYU1 1516 aa6.31□□□□□ -1.4
PTPN13-209ENST00000511467 CSPP1Q1MSJ5 1256 aa6.31□□□□□ -1.4
PTPN13-209ENST00000511467 HDGFL2Q7Z4V5 671 aaPredicted RBP6.31□□□□□ -1.4
PTPN13-209ENST00000511467 PPARGC1BQ86YN6 1023 aaKnown RBP6.31□□□□□ -1.4
PTPN13-209ENST00000511467 GPATCH3Q96I76 525 aa6.31□□□□□ -1.4
PTPN13-209ENST00000511467 SPAG9O60271 1321 aaKnown RBP6.31□□□□□ -1.4
PTPN13-209ENST00000511467 ZRSR1Q15695 479 aaKnown RBP6.3□□□□□ -1.4
PTPN13-209ENST00000511467 KIF15Q9NS87 1388 aa6.3□□□□□ -1.4
PTPN13-209ENST00000511467 SHANK2Q9UPX8 1470 aa6.3□□□□□ -1.4
PTPN13-209ENST00000511467 CAMSAP2Q08AD1 1489 aa6.3□□□□□ -1.4
PTPN13-209ENST00000511467 DHX8Q14562 1220 aaKnown RBP6.3□□□□□ -1.4
PTPN13-209ENST00000511467 ADAMTS12P58397 1594 aa6.3□□□□□ -1.4
PTPN13-209ENST00000511467 POLA1P09884 1462 aaPredicted RBP6.3□□□□□ -1.4
PTPN13-209ENST00000511467 NKTRP30414 1462 aaKnown RBP6.3□□□□□ -1.4
PTPN13-209ENST00000511467 VGFO15240 615 aaPredicted RBP6.3□□□□□ -1.4
PTPN13-209ENST00000511467 RPGRIP1LQ68CZ1 1315 aa6.29□□□□□ -1.4
PTPN13-209ENST00000511467 TROQ12816 1431 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms