RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
OTUD4-207ENST00000509517 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
OTUD4-207ENST00000509517 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
OTUD4-207ENST00000509517 RNF25Q96BH1 459 aaPredicted RBP10.53□□□□□ -0.72
OTUD4-207ENST00000509517 SOX12O15370 315 aa10.52□□□□□ -0.73
OTUD4-207ENST00000509517 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
OTUD4-207ENST00000509517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
OTUD4-207ENST00000509517 PTGER2P43116 358 aa10.5□□□□□ -0.73
OTUD4-207ENST00000509517 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
OTUD4-207ENST00000509517 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
OTUD4-207ENST00000509517 RIOK3O14730 519 aaKnown RBP10.44□□□□□ -0.74
OTUD4-207ENST00000509517 NUDT7P0C024 238 aa10.44□□□□□ -0.74
OTUD4-207ENST00000509517 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
OTUD4-207ENST00000509517 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
OTUD4-207ENST00000509517 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
OTUD4-207ENST00000509517 LHX6Q9UPM6 363 aa10.41□□□□□ -0.74
OTUD4-207ENST00000509517 KIF3CO14782 793 aa10.4□□□□□ -0.74
OTUD4-207ENST00000509517 C2orf72A6NCS6 295 aa10.39□□□□□ -0.75
OTUD4-207ENST00000509517 VGFO15240 615 aaPredicted RBP10.37□□□□□ -0.75
OTUD4-207ENST00000509517 NLRP6P59044 892 aa10.35□□□□□ -0.75
OTUD4-207ENST00000509517 PCDHGA4Q9Y5G9 962 aa10.35□□□□□ -0.75
OTUD4-207ENST00000509517 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
OTUD4-207ENST00000509517 PBX2P40425 430 aa10.32□□□□□ -0.76
OTUD4-207ENST00000509517 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
OTUD4-207ENST00000509517 BCL11BQ9C0K0 894 aaPredicted RBP10.31□□□□□ -0.76
OTUD4-207ENST00000509517 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
OTUD4-207ENST00000509517 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
OTUD4-207ENST00000509517 SLC34A2O95436 690 aa10.27□□□□□ -0.77
OTUD4-207ENST00000509517 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
OTUD4-207ENST00000509517 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
OTUD4-207ENST00000509517 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
OTUD4-207ENST00000509517 PSEN2P49810 448 aa10.25□□□□□ -0.77
OTUD4-207ENST00000509517 HRO43593 1189 aa10.24□□□□□ -0.77
OTUD4-207ENST00000509517 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
OTUD4-207ENST00000509517 PPP1R37O75864 691 aa10.19□□□□□ -0.78
OTUD4-207ENST00000509517 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
OTUD4-207ENST00000509517 STK25O00506 426 aa10.16□□□□□ -0.78
OTUD4-207ENST00000509517 TK2O00142 265 aa10.15□□□□□ -0.78
OTUD4-207ENST00000509517 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
OTUD4-207ENST00000509517 PTPN5P54829 565 aa10.1□□□□□ -0.79
OTUD4-207ENST00000509517 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
OTUD4-207ENST00000509517 PLPP6Q8IY26 295 aa10.06□□□□□ -0.8
OTUD4-207ENST00000509517 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
OTUD4-207ENST00000509517 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
OTUD4-207ENST00000509517 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
OTUD4-207ENST00000509517 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
OTUD4-207ENST00000509517 RGL2O15211 777 aa10.03□□□□□ -0.8
OTUD4-207ENST00000509517 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
OTUD4-207ENST00000509517 FOXK1P85037 733 aa10.02□□□□□ -0.81
OTUD4-207ENST00000509517 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
OTUD4-207ENST00000509517 DSG2Q14126 1118 aa10.01□□□□□ -0.81
OTUD4-207ENST00000509517 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
OTUD4-207ENST00000509517 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
OTUD4-207ENST00000509517 BHMG1C9JSJ3 638 aaPredicted RBP9.97□□□□□ -0.81
OTUD4-207ENST00000509517 IFFO2Q5TF58 517 aa9.96□□□□□ -0.82
OTUD4-207ENST00000509517 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
OTUD4-207ENST00000509517 A0A0G2JS52 829 aa9.95□□□□□ -0.82
OTUD4-207ENST00000509517 PKD2Q13563 968 aa9.95□□□□□ -0.82
OTUD4-207ENST00000509517 RGS20O76081 388 aa9.94□□□□□ -0.82
OTUD4-207ENST00000509517 TBC1D12O60347 775 aa9.92□□□□□ -0.82
OTUD4-207ENST00000509517 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
OTUD4-207ENST00000509517 OXER1Q8TDS5 423 aa9.91□□□□□ -0.82
OTUD4-207ENST00000509517 UPF1Q92900 1129 aaKnown RBP eCLIP9.91□□□□□ -0.82
OTUD4-207ENST00000509517 SLC4A5Q9BY07 1137 aa9.9□□□□□ -0.82
OTUD4-207ENST00000509517 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
OTUD4-207ENST00000509517 WNT2BQ93097 391 aa9.89□□□□□ -0.83
OTUD4-207ENST00000509517 ZBED2Q9BTP6 218 aa9.89□□□□□ -0.83
OTUD4-207ENST00000509517 KCNH8Q96L42 1107 aa9.87□□□□□ -0.83
OTUD4-207ENST00000509517 FOSBP53539 338 aa9.85□□□□□ -0.83
OTUD4-207ENST00000509517 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
OTUD4-207ENST00000509517 MRPL50Q8N5N7 158 aaKnown RBP9.84□□□□□ -0.83
OTUD4-207ENST00000509517 PTPREP23469 700 aa9.83□□□□□ -0.84
OTUD4-207ENST00000509517 ADAM33Q9BZ11 813 aa9.82□□□□□ -0.84
OTUD4-207ENST00000509517 LCE2BO14633 110 aa9.79□□□□□ -0.84
OTUD4-207ENST00000509517 Q6ZNB5 142 aa9.79□□□□□ -0.84
OTUD4-207ENST00000509517 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
OTUD4-207ENST00000509517 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
OTUD4-207ENST00000509517 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
OTUD4-207ENST00000509517 BCAMP50895 628 aa9.75□□□□□ -0.85
OTUD4-207ENST00000509517 PROX2Q3B8N5 592 aa9.75□□□□□ -0.85
OTUD4-207ENST00000509517 ZDHHC16Q969W1 377 aa9.75□□□□□ -0.85
OTUD4-207ENST00000509517 EVI5O60447 810 aa9.74□□□□□ -0.85
OTUD4-207ENST00000509517 PPP1R15BQ5SWA1 713 aa9.74□□□□□ -0.85
OTUD4-207ENST00000509517 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
OTUD4-207ENST00000509517 COL9A1P20849 921 aa9.73□□□□□ -0.85
OTUD4-207ENST00000509517 NKX1-1Q15270 411 aaPredicted RBP9.73□□□□□ -0.85
OTUD4-207ENST00000509517 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
OTUD4-207ENST00000509517 HS6ST3Q8IZP7 471 aa9.72□□□□□ -0.85
OTUD4-207ENST00000509517 NBPF3Q9H094 633 aa9.72□□□□□ -0.85
OTUD4-207ENST00000509517 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
OTUD4-207ENST00000509517 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
OTUD4-207ENST00000509517 RABGEF1Q9UJ41 708 aa9.68□□□□□ -0.86
OTUD4-207ENST00000509517 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
OTUD4-207ENST00000509517 SOWAHBA6NEL2 793 aa9.66□□□□□ -0.86
OTUD4-207ENST00000509517 PPP1R3GB7ZBB8 358 aa9.65□□□□□ -0.86
OTUD4-207ENST00000509517 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
OTUD4-207ENST00000509517 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
OTUD4-207ENST00000509517 ZFRQ96KR1 1074 aaKnown RBP9.63□□□□□ -0.87
OTUD4-207ENST00000509517 KCNC4Q03721 635 aa9.62□□□□□ -0.87
OTUD4-207ENST00000509517 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms