RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
OTUD4-207ENST00000509517 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
OTUD4-207ENST00000509517 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
OTUD4-207ENST00000509517 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
OTUD4-207ENST00000509517 FOXD1Q16676 465 aa20.05■□□□□ 0.8
OTUD4-207ENST00000509517 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
OTUD4-207ENST00000509517 MSH5O43196 834 aa18.74■□□□□ 0.59
OTUD4-207ENST00000509517 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
OTUD4-207ENST00000509517 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
OTUD4-207ENST00000509517 ADRA2BP18089 450 aa18.37■□□□□ 0.53
OTUD4-207ENST00000509517 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
OTUD4-207ENST00000509517 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
OTUD4-207ENST00000509517 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
OTUD4-207ENST00000509517 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
OTUD4-207ENST00000509517 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
OTUD4-207ENST00000509517 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
OTUD4-207ENST00000509517 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
OTUD4-207ENST00000509517 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
OTUD4-207ENST00000509517 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
OTUD4-207ENST00000509517 CNKSR2Q8WXI2 1034 aa15.82■□□□□ 0.12
OTUD4-207ENST00000509517 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
OTUD4-207ENST00000509517 C1QBPQ07021 282 aaKnown RBP15.71■□□□□ 0.11
OTUD4-207ENST00000509517 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
OTUD4-207ENST00000509517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
OTUD4-207ENST00000509517 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
OTUD4-207ENST00000509517 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
OTUD4-207ENST00000509517 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
OTUD4-207ENST00000509517 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
OTUD4-207ENST00000509517 POTEHQ6S545 545 aa14.93□□□□□ -0.02
OTUD4-207ENST00000509517 DSG3P32926 999 aa14.91□□□□□ -0.02
OTUD4-207ENST00000509517 CAPN15O75808 1086 aa14.85□□□□□ -0.03
OTUD4-207ENST00000509517 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
OTUD4-207ENST00000509517 ABCB7O75027 752 aa14.55□□□□□ -0.08
OTUD4-207ENST00000509517 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
OTUD4-207ENST00000509517 KCNA4P22459 653 aa14.5□□□□□ -0.09
OTUD4-207ENST00000509517 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
OTUD4-207ENST00000509517 APLP2Q06481 763 aa14.24□□□□□ -0.13
OTUD4-207ENST00000509517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
OTUD4-207ENST00000509517 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
OTUD4-207ENST00000509517 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
OTUD4-207ENST00000509517 POLA2Q14181 598 aa14.06□□□□□ -0.16
OTUD4-207ENST00000509517 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
OTUD4-207ENST00000509517 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
OTUD4-207ENST00000509517 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
OTUD4-207ENST00000509517 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
OTUD4-207ENST00000509517 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
OTUD4-207ENST00000509517 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
OTUD4-207ENST00000509517 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
OTUD4-207ENST00000509517 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
OTUD4-207ENST00000509517 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
OTUD4-207ENST00000509517 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
OTUD4-207ENST00000509517 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
OTUD4-207ENST00000509517 HAX1O00165 279 aa13.52□□□□□ -0.25
OTUD4-207ENST00000509517 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
OTUD4-207ENST00000509517 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
OTUD4-207ENST00000509517 EVX2Q03828 476 aa13.5□□□□□ -0.25
OTUD4-207ENST00000509517 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
OTUD4-207ENST00000509517 ZBTB22O15209 634 aa13.38□□□□□ -0.27
OTUD4-207ENST00000509517 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
OTUD4-207ENST00000509517 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
OTUD4-207ENST00000509517 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
OTUD4-207ENST00000509517 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
OTUD4-207ENST00000509517 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
OTUD4-207ENST00000509517 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
OTUD4-207ENST00000509517 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
OTUD4-207ENST00000509517 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
OTUD4-207ENST00000509517 FBLN2P98095 1184 aa13.07□□□□□ -0.32
OTUD4-207ENST00000509517 GABBR2O75899 941 aa13.03□□□□□ -0.32
OTUD4-207ENST00000509517 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
OTUD4-207ENST00000509517 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
OTUD4-207ENST00000509517 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
OTUD4-207ENST00000509517 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
OTUD4-207ENST00000509517 LHX8Q68G74 356 aa12.93□□□□□ -0.34
OTUD4-207ENST00000509517 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
OTUD4-207ENST00000509517 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
OTUD4-207ENST00000509517 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
OTUD4-207ENST00000509517 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
OTUD4-207ENST00000509517 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
OTUD4-207ENST00000509517 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
OTUD4-207ENST00000509517 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
OTUD4-207ENST00000509517 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
OTUD4-207ENST00000509517 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
OTUD4-207ENST00000509517 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
OTUD4-207ENST00000509517 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
OTUD4-207ENST00000509517 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
OTUD4-207ENST00000509517 CLCN6P51797 869 aa12.43□□□□□ -0.42
OTUD4-207ENST00000509517 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
OTUD4-207ENST00000509517 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
OTUD4-207ENST00000509517 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
OTUD4-207ENST00000509517 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
OTUD4-207ENST00000509517 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
OTUD4-207ENST00000509517 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
OTUD4-207ENST00000509517 POTEMA6NI47 508 aa12.19□□□□□ -0.46
OTUD4-207ENST00000509517 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
OTUD4-207ENST00000509517 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
OTUD4-207ENST00000509517 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
OTUD4-207ENST00000509517 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
OTUD4-207ENST00000509517 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
OTUD4-207ENST00000509517 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
OTUD4-207ENST00000509517 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms