RNA–Protein interactions for RNA: ENST00000509517.1
Retrieved 4 of 4 RNA–protein pairs in 21.3 ms
OTUD4-207, Transcript of OTU deubiquitinase 4, human
TSL 3
Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
OTUD4-207 | ENST00000509517 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 1.39 | □□□□□ -2.19 | 3e-66 | ■■■■■ 64.5 |
OTUD4-207 | ENST00000509517 | QKI | Q96PU8 | 341 aa | Known RBP eCLIP | 1.63 | □□□□□ -2.15 | 7e-8 | ■■■■■ 42.8 |
OTUD4-207 | ENST00000509517 | ZNF622 | Q969S3 | 477 aa | Known RBP eCLIP | 3.06 | □□□□□ -1.92 | 5e-7 | ■□□□□ 8.2 |
OTUD4-207 | ENST00000509517 | BUD13 | Q9BRD0 | 619 aa | Known RBP eCLIP | 5.32 | □□□□□ -1.56 | 5e-7 | ■■■□□ 18.9 |