RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 DAXXQ9UER7 740 aaPredicted RBP19.1■□□□□ 0.65
TRIM41-204ENST00000508930 TCERG1O14776 1098 aaKnown RBP19.09■□□□□ 0.65
TRIM41-204ENST00000508930 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
TRIM41-204ENST00000508930 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.65
TRIM41-204ENST00000508930 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
TRIM41-204ENST00000508930 PDE4AP27815 886 aa19.07■□□□□ 0.64
TRIM41-204ENST00000508930 SNAPC4Q5SXM2 1469 aa19.07■□□□□ 0.64
TRIM41-204ENST00000508930 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
TRIM41-204ENST00000508930 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
TRIM41-204ENST00000508930 EHBP1L1Q8N3D4 1523 aa19.04■□□□□ 0.64
TRIM41-204ENST00000508930 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
TRIM41-204ENST00000508930 RNF123Q5XPI4 1314 aa19.04■□□□□ 0.64
TRIM41-204ENST00000508930 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
TRIM41-204ENST00000508930 RCAN3Q9UKA8 241 aa19.03■□□□□ 0.64
TRIM41-204ENST00000508930 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
TRIM41-204ENST00000508930 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
TRIM41-204ENST00000508930 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
TRIM41-204ENST00000508930 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.63
TRIM41-204ENST00000508930 USP47Q96K76 1375 aa19.01■□□□□ 0.63
TRIM41-204ENST00000508930 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
TRIM41-204ENST00000508930 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
TRIM41-204ENST00000508930 DDRGK1Q96HY6 314 aa18.98■□□□□ 0.63
TRIM41-204ENST00000508930 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
TRIM41-204ENST00000508930 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
TRIM41-204ENST00000508930 RPRD2Q5VT52 1461 aaKnown RBP18.98■□□□□ 0.63
TRIM41-204ENST00000508930 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
TRIM41-204ENST00000508930 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
TRIM41-204ENST00000508930 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
TRIM41-204ENST00000508930 UGGT2Q9NYU1 1516 aa18.96■□□□□ 0.63
TRIM41-204ENST00000508930 BACH2Q9BYV9 841 aa18.96■□□□□ 0.63
TRIM41-204ENST00000508930 DHX29Q7Z478 1369 aaKnown RBP18.96■□□□□ 0.63
TRIM41-204ENST00000508930 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
TRIM41-204ENST00000508930 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
TRIM41-204ENST00000508930 MS4A1P11836 297 aa18.94■□□□□ 0.62
TRIM41-204ENST00000508930 SPATA31E1Q6ZUB1 1445 aa18.94■□□□□ 0.62
TRIM41-204ENST00000508930 KDM6BO15054 1643 aa18.94■□□□□ 0.62
TRIM41-204ENST00000508930 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
TRIM41-204ENST00000508930 CUL7Q14999 1698 aa18.93■□□□□ 0.62
TRIM41-204ENST00000508930 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
TRIM41-204ENST00000508930 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
TRIM41-204ENST00000508930 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
TRIM41-204ENST00000508930 KIF15Q9NS87 1388 aa18.92■□□□□ 0.62
TRIM41-204ENST00000508930 ZNF644Q9H582 1327 aaPredicted RBP18.91■□□□□ 0.62
TRIM41-204ENST00000508930 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
TRIM41-204ENST00000508930 PKD2Q13563 968 aa18.91■□□□□ 0.62
TRIM41-204ENST00000508930 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
TRIM41-204ENST00000508930 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
TRIM41-204ENST00000508930 PLIN1O60240 522 aa18.9■□□□□ 0.62
TRIM41-204ENST00000508930 RALBP1Q15311 655 aa18.9■□□□□ 0.62
TRIM41-204ENST00000508930 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
TRIM41-204ENST00000508930 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.62
TRIM41-204ENST00000508930 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.62
TRIM41-204ENST00000508930 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
TRIM41-204ENST00000508930 GCC2Q8IWJ2 1684 aa18.88■□□□□ 0.61
TRIM41-204ENST00000508930 BRPF3Q9ULD4 1205 aa18.88■□□□□ 0.61
TRIM41-204ENST00000508930 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
TRIM41-204ENST00000508930 GSE1Q14687 1217 aa18.87■□□□□ 0.61
TRIM41-204ENST00000508930 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
TRIM41-204ENST00000508930 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
TRIM41-204ENST00000508930 SKAP1Q86WV1 359 aa18.86■□□□□ 0.61
TRIM41-204ENST00000508930 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
TRIM41-204ENST00000508930 BRD4O60885 1362 aaPredicted RBP18.85■□□□□ 0.61
TRIM41-204ENST00000508930 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
TRIM41-204ENST00000508930 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
TRIM41-204ENST00000508930 DAPK1P53355 1430 aa18.84■□□□□ 0.61
TRIM41-204ENST00000508930 CRBNQ96SW2 442 aa18.84■□□□□ 0.61
TRIM41-204ENST00000508930 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
TRIM41-204ENST00000508930 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
TRIM41-204ENST00000508930 CFDP1Q9UEE9 299 aaPredicted RBP18.83■□□□□ 0.6
TRIM41-204ENST00000508930 NFKBIBQ15653 356 aa18.83■□□□□ 0.6
TRIM41-204ENST00000508930 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
TRIM41-204ENST00000508930 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
TRIM41-204ENST00000508930 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
TRIM41-204ENST00000508930 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
TRIM41-204ENST00000508930 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
TRIM41-204ENST00000508930 WASHC2CQ9Y4E1 1318 aa18.8■□□□□ 0.6
TRIM41-204ENST00000508930 KTN1Q86UP2 1357 aaKnown RBP18.8■□□□□ 0.6
TRIM41-204ENST00000508930 ABCC5O15440 1437 aa18.8■□□□□ 0.6
TRIM41-204ENST00000508930 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
TRIM41-204ENST00000508930 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
TRIM41-204ENST00000508930 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
TRIM41-204ENST00000508930 FRAT1Q92837 279 aaPredicted RBP18.77■□□□□ 0.6
TRIM41-204ENST00000508930 NESP48681 1621 aa18.77■□□□□ 0.6
TRIM41-204ENST00000508930 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
TRIM41-204ENST00000508930 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
TRIM41-204ENST00000508930 KIAA1107Q9UPP5 1409 aa18.75■□□□□ 0.59
TRIM41-204ENST00000508930 RGS3P49796 1198 aa18.75■□□□□ 0.59
TRIM41-204ENST00000508930 NUP155O75694 1391 aa18.72■□□□□ 0.59
TRIM41-204ENST00000508930 BCORL1Q5H9F3 1711 aa18.7■□□□□ 0.58
TRIM41-204ENST00000508930 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
TRIM41-204ENST00000508930 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
TRIM41-204ENST00000508930 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.69■□□□□ 0.58
TRIM41-204ENST00000508930 PZPP20742 1482 aa18.68■□□□□ 0.58
TRIM41-204ENST00000508930 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
TRIM41-204ENST00000508930 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
TRIM41-204ENST00000508930 POLR1AO95602 1720 aaPredicted RBP18.67■□□□□ 0.58
TRIM41-204ENST00000508930 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
TRIM41-204ENST00000508930 FRAT2O75474 233 aaPredicted RBP18.66■□□□□ 0.58
TRIM41-204ENST00000508930 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM41-204ENST00000508930 TSPY4P0CV99 314 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms