RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
TRIM41-204ENST00000508930 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
TRIM41-204ENST00000508930 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.47
TRIM41-204ENST00000508930 HRCP23327 699 aa23.89■■□□□ 1.42
TRIM41-204ENST00000508930 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
TRIM41-204ENST00000508930 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
TRIM41-204ENST00000508930 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
TRIM41-204ENST00000508930 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
TRIM41-204ENST00000508930 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
TRIM41-204ENST00000508930 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
TRIM41-204ENST00000508930 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
TRIM41-204ENST00000508930 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
TRIM41-204ENST00000508930 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
TRIM41-204ENST00000508930 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
TRIM41-204ENST00000508930 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
TRIM41-204ENST00000508930 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
TRIM41-204ENST00000508930 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.18
TRIM41-204ENST00000508930 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
TRIM41-204ENST00000508930 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
TRIM41-204ENST00000508930 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
TRIM41-204ENST00000508930 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
TRIM41-204ENST00000508930 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
TRIM41-204ENST00000508930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
TRIM41-204ENST00000508930 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
TRIM41-204ENST00000508930 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
TRIM41-204ENST00000508930 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
TRIM41-204ENST00000508930 MYT1Q01538 1121 aa21.92■■□□□ 1.1
TRIM41-204ENST00000508930 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
TRIM41-204ENST00000508930 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
TRIM41-204ENST00000508930 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
TRIM41-204ENST00000508930 ABCC9O60706 1549 aa21.79■■□□□ 1.08
TRIM41-204ENST00000508930 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
TRIM41-204ENST00000508930 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
TRIM41-204ENST00000508930 SCRIBQ14160 1630 aa21.64■■□□□ 1.06
TRIM41-204ENST00000508930 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
TRIM41-204ENST00000508930 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
TRIM41-204ENST00000508930 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
TRIM41-204ENST00000508930 MIER1Q8N108 512 aa21.28■■□□□ 1
TRIM41-204ENST00000508930 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
TRIM41-204ENST00000508930 MROH2BQ7Z745 1585 aa21.22■□□□□ 0.99
TRIM41-204ENST00000508930 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
TRIM41-204ENST00000508930 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.974e-9■■□□□ 14.1
TRIM41-204ENST00000508930 APLP2Q06481 763 aa21.1■□□□□ 0.97
TRIM41-204ENST00000508930 WIZO95785 1651 aa21.1■□□□□ 0.97
TRIM41-204ENST00000508930 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
TRIM41-204ENST00000508930 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
TRIM41-204ENST00000508930 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
TRIM41-204ENST00000508930 SOGA1O94964 1423 aa21■□□□□ 0.95
TRIM41-204ENST00000508930 ABCC8Q09428 1581 aa21■□□□□ 0.95
TRIM41-204ENST00000508930 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
TRIM41-204ENST00000508930 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.94
TRIM41-204ENST00000508930 EEA1Q15075 1411 aa20.87■□□□□ 0.93
TRIM41-204ENST00000508930 NACADO15069 1562 aa20.86■□□□□ 0.93
TRIM41-204ENST00000508930 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
TRIM41-204ENST00000508930 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
TRIM41-204ENST00000508930 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
TRIM41-204ENST00000508930 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
TRIM41-204ENST00000508930 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
TRIM41-204ENST00000508930 CLIP1P30622 1438 aa20.75■□□□□ 0.91
TRIM41-204ENST00000508930 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
TRIM41-204ENST00000508930 BCANQ96GW7 911 aa20.68■□□□□ 0.9
TRIM41-204ENST00000508930 ANP32EQ9BTT0 268 aa20.67■□□□□ 0.9
TRIM41-204ENST00000508930 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
TRIM41-204ENST00000508930 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
TRIM41-204ENST00000508930 VPS8Q8N3P4 1428 aa20.62■□□□□ 0.89
TRIM41-204ENST00000508930 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
TRIM41-204ENST00000508930 ITGAEP38570 1179 aa20.58■□□□□ 0.89
TRIM41-204ENST00000508930 NEFLP07196 543 aa20.53■□□□□ 0.88
TRIM41-204ENST00000508930 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRIM41-204ENST00000508930 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
TRIM41-204ENST00000508930 FKBP8Q14318 412 aa20.51■□□□□ 0.87
TRIM41-204ENST00000508930 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
TRIM41-204ENST00000508930 BCL11AQ9H165 835 aa20.45■□□□□ 0.86
TRIM41-204ENST00000508930 KCNH8Q96L42 1107 aa20.44■□□□□ 0.86
TRIM41-204ENST00000508930 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
TRIM41-204ENST00000508930 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
TRIM41-204ENST00000508930 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
TRIM41-204ENST00000508930 KIF21BO75037 1637 aa20.38■□□□□ 0.85
TRIM41-204ENST00000508930 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
TRIM41-204ENST00000508930 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
TRIM41-204ENST00000508930 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
TRIM41-204ENST00000508930 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
TRIM41-204ENST00000508930 ERICH6Q7L0X2 663 aa20.27■□□□□ 0.84
TRIM41-204ENST00000508930 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
TRIM41-204ENST00000508930 ANP32CO43423 234 aa20.22■□□□□ 0.83
TRIM41-204ENST00000508930 HIRIP3Q9BW71 556 aaPredicted RBP20.2■□□□□ 0.82
TRIM41-204ENST00000508930 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
TRIM41-204ENST00000508930 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
TRIM41-204ENST00000508930 RAB3GAP2Q9H2M9 1393 aa20.15■□□□□ 0.82
TRIM41-204ENST00000508930 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
TRIM41-204ENST00000508930 RRBP1Q9P2E9 1410 aaKnown RBP20.12■□□□□ 0.81
TRIM41-204ENST00000508930 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
TRIM41-204ENST00000508930 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
TRIM41-204ENST00000508930 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
TRIM41-204ENST00000508930 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
TRIM41-204ENST00000508930 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
TRIM41-204ENST00000508930 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
TRIM41-204ENST00000508930 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
TRIM41-204ENST00000508930 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
TRIM41-204ENST00000508930 CUX2O14529 1486 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms