RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
DDR1-262ENST00000508312 EIF5BO60841 1220 aaKnown RBP17.31■□□□□ 0.36
DDR1-262ENST00000508312 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
DDR1-262ENST00000508312 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
DDR1-262ENST00000508312 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
DDR1-262ENST00000508312 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
DDR1-262ENST00000508312 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
DDR1-262ENST00000508312 KDM6BO15054 1643 aa17.29■□□□□ 0.36
DDR1-262ENST00000508312 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
DDR1-262ENST00000508312 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
DDR1-262ENST00000508312 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
DDR1-262ENST00000508312 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.35
DDR1-262ENST00000508312 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
DDR1-262ENST00000508312 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
DDR1-262ENST00000508312 EPRSP07814 1512 aaKnown RBP17.25■□□□□ 0.35
DDR1-262ENST00000508312 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
DDR1-262ENST00000508312 IPO9Q96P70 1041 aaKnown RBP17.25■□□□□ 0.35
DDR1-262ENST00000508312 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
DDR1-262ENST00000508312 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
DDR1-262ENST00000508312 WDR62O43379 1518 aa17.23■□□□□ 0.35
DDR1-262ENST00000508312 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
DDR1-262ENST00000508312 SUPT6HQ7KZ85 1726 aaKnown RBP17.22■□□□□ 0.35
DDR1-262ENST00000508312 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
DDR1-262ENST00000508312 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
DDR1-262ENST00000508312 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
DDR1-262ENST00000508312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
DDR1-262ENST00000508312 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.35
DDR1-262ENST00000508312 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
DDR1-262ENST00000508312 IQGAP2Q13576 1575 aa17.21■□□□□ 0.34
DDR1-262ENST00000508312 EHBP1L1Q8N3D4 1523 aa17.2■□□□□ 0.34
DDR1-262ENST00000508312 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
DDR1-262ENST00000508312 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
DDR1-262ENST00000508312 NEFMP07197 916 aa17.18■□□□□ 0.34
DDR1-262ENST00000508312 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
DDR1-262ENST00000508312 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
DDR1-262ENST00000508312 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.348e-8■■■■■ 39.6
DDR1-262ENST00000508312 PLB1Q6P1J6 1458 aa17.15■□□□□ 0.34
DDR1-262ENST00000508312 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
DDR1-262ENST00000508312 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
DDR1-262ENST00000508312 KDM5BQ9UGL1 1544 aa17.13■□□□□ 0.33
DDR1-262ENST00000508312 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
DDR1-262ENST00000508312 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
DDR1-262ENST00000508312 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
DDR1-262ENST00000508312 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
DDR1-262ENST00000508312 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
DDR1-262ENST00000508312 ABCC5O15440 1437 aa17.1■□□□□ 0.33
DDR1-262ENST00000508312 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
DDR1-262ENST00000508312 BRPF3Q9ULD4 1205 aa17.09■□□□□ 0.33
DDR1-262ENST00000508312 DAPK1P53355 1430 aa17.08■□□□□ 0.33
DDR1-262ENST00000508312 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
DDR1-262ENST00000508312 PKD2Q13563 968 aa17.07■□□□□ 0.32
DDR1-262ENST00000508312 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
DDR1-262ENST00000508312 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDR1-262ENST00000508312 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
DDR1-262ENST00000508312 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
DDR1-262ENST00000508312 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
DDR1-262ENST00000508312 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.31
DDR1-262ENST00000508312 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
DDR1-262ENST00000508312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDR1-262ENST00000508312 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
DDR1-262ENST00000508312 KIAA0556O60303 1618 aa17■□□□□ 0.31
DDR1-262ENST00000508312 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
DDR1-262ENST00000508312 AKNAQ7Z591 1439 aa17■□□□□ 0.31
DDR1-262ENST00000508312 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
DDR1-262ENST00000508312 RGL3Q3MIN7 710 aa16.99■□□□□ 0.31
DDR1-262ENST00000508312 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
DDR1-262ENST00000508312 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
DDR1-262ENST00000508312 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
DDR1-262ENST00000508312 KIF14Q15058 1648 aa16.97■□□□□ 0.31
DDR1-262ENST00000508312 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
DDR1-262ENST00000508312 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
DDR1-262ENST00000508312 NUP155O75694 1391 aa16.94■□□□□ 0.3
DDR1-262ENST00000508312 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
DDR1-262ENST00000508312 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
DDR1-262ENST00000508312 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
DDR1-262ENST00000508312 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
DDR1-262ENST00000508312 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
DDR1-262ENST00000508312 GCC2Q8IWJ2 1684 aa16.92■□□□□ 0.3
DDR1-262ENST00000508312 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
DDR1-262ENST00000508312 NCOA1Q15788 1441 aa16.92■□□□□ 0.3
DDR1-262ENST00000508312 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
DDR1-262ENST00000508312 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
DDR1-262ENST00000508312 GSE1Q14687 1217 aa16.9■□□□□ 0.3
DDR1-262ENST00000508312 WASHC2CQ9Y4E1 1318 aa16.9■□□□□ 0.3
DDR1-262ENST00000508312 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
DDR1-262ENST00000508312 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
DDR1-262ENST00000508312 PZPP20742 1482 aa16.9■□□□□ 0.3
DDR1-262ENST00000508312 TEX14Q8IWB6 1497 aa16.89■□□□□ 0.29
DDR1-262ENST00000508312 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
DDR1-262ENST00000508312 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
DDR1-262ENST00000508312 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
DDR1-262ENST00000508312 USP47Q96K76 1375 aa16.87■□□□□ 0.29
DDR1-262ENST00000508312 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
DDR1-262ENST00000508312 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
DDR1-262ENST00000508312 PDE4AP27815 886 aa16.87■□□□□ 0.29
DDR1-262ENST00000508312 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
DDR1-262ENST00000508312 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
DDR1-262ENST00000508312 DNMT1P26358 1616 aaKnown RBP16.86■□□□□ 0.29
DDR1-262ENST00000508312 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
DDR1-262ENST00000508312 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms